[gentoo-commits] proj/sci:master commit in: sci-chemistry/openbabel-python/

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* [gentoo-commits] proj/sci:master commit in: sci-chemistry/openbabel-python/
@ 2011-03-10 19:00 Justin Lecher
  0 siblings, 0 replies; 16+ messages in thread
From: Justin Lecher @ 2011-03-10 19:00 UTC (permalink / raw
  To: gentoo-commits

commit:     e83df99e01d29ca016570fd3fe7f483480e8d115
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Thu Mar 10 11:30:15 2011 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Thu Mar 10 11:30:15 2011 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=e83df99e

Correct Slots for gtk 3 introduction to tree

(Portage version: 2.2.0_alpha26/git/Linux x86_64, RepoMan options: --force, signed Manifest commit with key 70EB7916)

---
 sci-chemistry/openbabel-python/ChangeLog           |    6 ++-
 .../openbabel-python/openbabel-python-2.2.1.ebuild |   46 -----------------
 .../openbabel-python/openbabel-python-2.2.2.ebuild |   52 --------------------
 .../openbabel-python/openbabel-python-2.3.0.ebuild |    7 +--
 4 files changed, 8 insertions(+), 103 deletions(-)

diff --git a/sci-chemistry/openbabel-python/ChangeLog b/sci-chemistry/openbabel-python/ChangeLog
index 5c888c0..44fba92 100644
--- a/sci-chemistry/openbabel-python/ChangeLog
+++ b/sci-chemistry/openbabel-python/ChangeLog
@@ -1,7 +1,11 @@
 # ChangeLog for sci-chemistry/openbabel-python
-# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
+# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+  10 Mar 2011; Justin Lecher <jlec@gentoo.org> -openbabel-python-2.2.1.ebuild,
+  -openbabel-python-2.2.2.ebuild, openbabel-python-2.3.0.ebuild:
+  Correct Slots for gtk 3 introduction to tree
+
 *openbabel-python-2.3.0 (13 Nov 2010)
 
   13 Nov 2010; Reinis Danne <rei4dan@gmail.com>

diff --git a/sci-chemistry/openbabel-python/openbabel-python-2.2.1.ebuild b/sci-chemistry/openbabel-python/openbabel-python-2.2.1.ebuild
deleted file mode 100644
index 52f71cd..0000000
--- a/sci-chemistry/openbabel-python/openbabel-python-2.2.1.ebuild
+++ /dev/null
@@ -1,46 +0,0 @@
-# Copyright 1999-2010 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: $
-
-inherit eutils
-
-DESCRIPTION="Python bindings for OpenBabel (including Pybel)"
-HOMEPAGE="http://openbabel.sourceforge.net/"
-SRC_URI="mirror://sourceforge/openbabel/openbabel-${PV}.tar.gz"
-
-KEYWORDS="~amd64"
-SLOT="0"
-LICENSE="GPL-2"
-IUSE="swig"
-
-RDEPEND="~sci-chemistry/openbabel-${PV}
-	dev-lang/python
-	dev-python/imaging
-	sci-libs/oasa"
-
-DEPEND="${RDEPEND}
-	swig? ( >=dev-lang/swig-1.3.38 )"
-
-S="${WORKDIR}/openbabel-${PV}"
-
-src_compile() {
-	econf \
-		$(use_enable swig maintainer-mode) \
-		--enable-static \
-			|| die "econf failed"
-	if use swig ; then
-		cd "${S}/scripts"
-		emake -W openbabel-python.i python/openbabel_python.cpp \
-			|| die "Failed to make SWIG python bindings"
-	fi
-	S="${S}/scripts/python"
-	cd "${S}"
-	python ./setup.py build || die "python setup build failed"
-}
-
-src_install() {
-	python ./setup.py install --root="${D}" --optimize=1 \
-		|| die "python setup install failed"
-	dohtml *.html
-	dodoc README
-}

diff --git a/sci-chemistry/openbabel-python/openbabel-python-2.2.2.ebuild b/sci-chemistry/openbabel-python/openbabel-python-2.2.2.ebuild
deleted file mode 100644
index 2ba48ec..0000000
--- a/sci-chemistry/openbabel-python/openbabel-python-2.2.2.ebuild
+++ /dev/null
@@ -1,52 +0,0 @@
-# Copyright 1999-2010 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: $
-
-EAPI="2"
-
-inherit eutils
-
-DESCRIPTION="Python bindings for OpenBabel (including Pybel)"
-HOMEPAGE="http://openbabel.sourceforge.net/"
-SRC_URI="mirror://sourceforge/openbabel/openbabel-${PV}.tar.gz"
-
-KEYWORDS="~amd64"
-SLOT="0"
-LICENSE="GPL-2"
-IUSE="swig"
-
-RDEPEND="~sci-chemistry/openbabel-${PV}
-	dev-lang/python
-	dev-python/imaging
-	sci-libs/oasa"
-
-DEPEND="${RDEPEND}
-	!~sci-chemistry/openbabel-${PV}[python]
-	swig? ( >=dev-lang/swig-1.3.39 )"
-
-S="${WORKDIR}/openbabel-${PV}"
-
-src_configure() {
-	econf \
-		$(use_enable swig maintainer-mode) \
-		--enable-static \
-			|| die "econf failed"
-}
-
-src_compile() {
-	if use swig ; then
-		cd "${S}/scripts"
-		emake -W openbabel-python.i python/openbabel_python.cpp \
-			|| die "Failed to make SWIG python bindings"
-	fi
-	S="${S}/scripts/python"
-	cd "${S}"
-	python ./setup.py build || die "python setup build failed"
-}
-
-src_install() {
-	python ./setup.py install --root="${D}" --optimize=1 \
-		|| die "python setup install failed"
-	dohtml *.html
-	dodoc README
-}

diff --git a/sci-chemistry/openbabel-python/openbabel-python-2.3.0.ebuild b/sci-chemistry/openbabel-python/openbabel-python-2.3.0.ebuild
index 70de479..7509385 100644
--- a/sci-chemistry/openbabel-python/openbabel-python-2.3.0.ebuild
+++ b/sci-chemistry/openbabel-python/openbabel-python-2.3.0.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2010 Gentoo Foundation
+# Copyright 1999-2011 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 # $Header: /var/cvsroot/gentoo-x86/sci-chemistry/openbabel/openbabel-2.2.3.ebuild,v 1.11 2010/07/18 14:53:22 armin76 Exp $
 
@@ -10,7 +10,7 @@ PYTHON_MODNAME="openbabel.py pybel.py"
 
 inherit cmake-utils eutils python distutils
 
-DESCRIPTION="Interconverts file formats used in molecular modeling"
+DESCRIPTION="Python bindings for OpenBabel (including Pybel)"
 HOMEPAGE="http://openbabel.sourceforge.net/"
 SRC_URI="mirror://sourceforge/openbabel/openbabel-${PV}.tar.gz"
 
@@ -21,11 +21,10 @@ IUSE=""
 
 RDEPEND="
 	~sci-chemistry/openbabel-${PV}
-	>=dev-libs/libxml2-2.6.5
+	dev-libs/libxml2:2
 	!sci-chemistry/babel
 	dev-cpp/eigen:2
 	sys-libs/zlib"
-
 DEPEND="${RDEPEND}
 	>=dev-util/cmake-2.6.0"
 



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* [gentoo-commits] proj/sci:master commit in: sci-chemistry/openbabel-python/
@ 2011-03-25 17:25 Justin Lecher
  0 siblings, 0 replies; 16+ messages in thread
From: Justin Lecher @ 2011-03-25 17:25 UTC (permalink / raw
  To: gentoo-commits

commit:     a3fe6fb9fc9b9be85d56ad1a83bb8f62dd74dabe
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Fri Mar 25 16:56:00 2011 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Fri Mar 25 16:56:00 2011 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=a3fe6fb9

Cleaned ebuild

(Portage version: 2.2.0_alpha28/git/Linux x86_64, signed Manifest commit with key 70EB7916)

---
 sci-chemistry/openbabel-python/ChangeLog           |    4 ++++
 sci-chemistry/openbabel-python/metadata.xml        |    3 ---
 .../openbabel-python/openbabel-python-2.3.0.ebuild |   12 ++++++------
 3 files changed, 10 insertions(+), 9 deletions(-)

diff --git a/sci-chemistry/openbabel-python/ChangeLog b/sci-chemistry/openbabel-python/ChangeLog
index 44fba92..b568ab5 100644
--- a/sci-chemistry/openbabel-python/ChangeLog
+++ b/sci-chemistry/openbabel-python/ChangeLog
@@ -2,6 +2,10 @@
 # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+  25 Mar 2011; Justin Lecher <jlec@gentoo.org> openbabel-python-2.3.0.ebuild,
+  metadata.xml:
+  Cleaned ebuild
+
   10 Mar 2011; Justin Lecher <jlec@gentoo.org> -openbabel-python-2.2.1.ebuild,
   -openbabel-python-2.2.2.ebuild, openbabel-python-2.3.0.ebuild:
   Correct Slots for gtk 3 introduction to tree

diff --git a/sci-chemistry/openbabel-python/metadata.xml b/sci-chemistry/openbabel-python/metadata.xml
index 7dd11d8..78a7105 100644
--- a/sci-chemistry/openbabel-python/metadata.xml
+++ b/sci-chemistry/openbabel-python/metadata.xml
@@ -9,7 +9,4 @@ search, convert, analyze, or store data from molecular modeling, chemistry,
 solid-state materials, biochemistry, or related areas. This package enables
 to access OpenBabel library from Python programs.
 </longdescription>
-<use>
-<flag name='swig'>Enable SWIG language binding regeneration</flag>
-</use>
 </pkgmetadata>

diff --git a/sci-chemistry/openbabel-python/openbabel-python-2.3.0.ebuild b/sci-chemistry/openbabel-python/openbabel-python-2.3.0.ebuild
index 7509385..463ab69 100644
--- a/sci-chemistry/openbabel-python/openbabel-python-2.3.0.ebuild
+++ b/sci-chemistry/openbabel-python/openbabel-python-2.3.0.ebuild
@@ -8,27 +8,27 @@ PYTHON_DEPEND="*:2.4"
 SUPPORT_PYTHON_ABIS="1"
 PYTHON_MODNAME="openbabel.py pybel.py"
 
-inherit cmake-utils eutils python distutils
+inherit cmake-utils eutils distutils
 
 DESCRIPTION="Python bindings for OpenBabel (including Pybel)"
 HOMEPAGE="http://openbabel.sourceforge.net/"
 SRC_URI="mirror://sourceforge/openbabel/openbabel-${PV}.tar.gz"
 
-KEYWORDS="~amd64 ~hppa ~ppc ~ppc64 ~sparc ~x86 ~amd64-linux ~x86-linux"
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
 SLOT="0"
 LICENSE="GPL-2"
 IUSE=""
 
 RDEPEND="
-	~sci-chemistry/openbabel-${PV}
+	dev-cpp/eigen:2
 	dev-libs/libxml2:2
 	!sci-chemistry/babel
-	dev-cpp/eigen:2
+	~sci-chemistry/openbabel-${PV}
 	sys-libs/zlib"
 DEPEND="${RDEPEND}
-	>=dev-util/cmake-2.6.0"
+	dev-util/cmake"
 
-S="${WORKDIR}/openbabel-${PV}"
+S="${WORKDIR}"/openbabel-${PV}
 
 DISTUTILS_SETUP_FILES="${WORKDIR}/openbabel-${PV}/scripts/python/setup.py"
 



^ permalink raw reply related	[flat|nested] 16+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-chemistry/openbabel-python/
@ 2011-03-26 16:03 Justin Lecher
  0 siblings, 0 replies; 16+ messages in thread
From: Justin Lecher @ 2011-03-26 16:03 UTC (permalink / raw
  To: gentoo-commits

commit:     4eb35eb90fb286dba07e49dcf48dc7369f268509
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Sat Mar 26 14:34:15 2011 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Sat Mar 26 14:34:15 2011 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=4eb35eb9

Moved swig to DEPEND

(Portage version: 2.2.0_alpha28/git/Linux x86_64, signed Manifest commit with key 70EB7916)

---
 sci-chemistry/openbabel-python/ChangeLog           |    3 +++
 .../openbabel-python/openbabel-python-2.3.0.ebuild |   11 ++++++-----
 2 files changed, 9 insertions(+), 5 deletions(-)

diff --git a/sci-chemistry/openbabel-python/ChangeLog b/sci-chemistry/openbabel-python/ChangeLog
index 2d92edd..5255e1c 100644
--- a/sci-chemistry/openbabel-python/ChangeLog
+++ b/sci-chemistry/openbabel-python/ChangeLog
@@ -2,6 +2,9 @@
 # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+  26 Mar 2011; Justin Lecher <jlec@gentoo.org> openbabel-python-2.3.0.ebuild:
+  Moved swig to DEPEND
+
   25 Mar 2011; Reinis Danne <rei4dan@gmail.com>
   openbabel-python-2.3.0.ebuild,
   +files/openbabel-python-2.3.0-py3_iterator.patch,

diff --git a/sci-chemistry/openbabel-python/openbabel-python-2.3.0.ebuild b/sci-chemistry/openbabel-python/openbabel-python-2.3.0.ebuild
index c5abbeb..3360a55 100644
--- a/sci-chemistry/openbabel-python/openbabel-python-2.3.0.ebuild
+++ b/sci-chemistry/openbabel-python/openbabel-python-2.3.0.ebuild
@@ -4,7 +4,7 @@
 
 EAPI="3"
 
-PYTHON_DEPEND="*:2.4"
+PYTHON_DEPEND="2"
 SUPPORT_PYTHON_ABIS="1"
 PYTHON_MODNAME="openbabel.py pybel.py"
 
@@ -24,18 +24,19 @@ RDEPEND="
 	dev-libs/libxml2:2
 	!sci-chemistry/babel
 	~sci-chemistry/openbabel-${PV}
-	=dev-lang/swig-2.0.1
 	sys-libs/zlib"
 DEPEND="${RDEPEND}
+	=dev-lang/swig-2.0.1
 	dev-util/cmake"
 
 S="${WORKDIR}"/openbabel-${PV}
 
-DISTUTILS_SETUP_FILES="${WORKDIR}/openbabel-${PV}/scripts/python/setup.py"
+DISTUTILS_SETUP_FILES="${S}/scripts/python/setup.py"
 
 src_prepare() {
-	epatch "${FILESDIR}/${P}-wrap_OBInternalCoord.patch"
-	epatch "${FILESDIR}/${P}-py3_iterator.patch"
+	epatch \
+		"${FILESDIR}"/${P}-wrap_OBInternalCoord.patch \
+		"${FILESDIR}"/${P}-py3_iterator.patch
 }
 
 src_configure() {



^ permalink raw reply related	[flat|nested] 16+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-chemistry/openbabel-python/
@ 2012-10-19 20:40 Reinis Danne
  0 siblings, 0 replies; 16+ messages in thread
From: Reinis Danne @ 2012-10-19 20:40 UTC (permalink / raw
  To: gentoo-commits

commit:     21a0fe094d18a9e877cc9fcba3030ab481afe42c
Author:     Reinis Danne <rei4dan <AT> gmail <DOT> com>
AuthorDate: Fri Oct 19 20:39:22 2012 +0000
Commit:     Reinis Danne <rei4dan <AT> gmail <DOT> com>
CommitDate: Fri Oct 19 20:39:22 2012 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=21a0fe09

openbabel-python: Add PYTHON_DEPS

---
 .../openbabel-python/openbabel-python-2.3.2.ebuild |    2 +-
 1 files changed, 1 insertions(+), 1 deletions(-)

diff --git a/sci-chemistry/openbabel-python/openbabel-python-2.3.2.ebuild b/sci-chemistry/openbabel-python/openbabel-python-2.3.2.ebuild
index df2c15b..d134fff 100644
--- a/sci-chemistry/openbabel-python/openbabel-python-2.3.2.ebuild
+++ b/sci-chemistry/openbabel-python/openbabel-python-2.3.2.ebuild
@@ -17,7 +17,7 @@ SLOT="0"
 LICENSE="GPL-2"
 IUSE=""
 
-RDEPEND="
+RDEPEND="${PYTHON_DEPS}
 	!sci-chemistry/babel
 	~sci-chemistry/openbabel-${PV}
 	sys-libs/zlib"


^ permalink raw reply related	[flat|nested] 16+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-chemistry/openbabel-python/
@ 2012-10-19 20:59 Reinis Danne
  0 siblings, 0 replies; 16+ messages in thread
From: Reinis Danne @ 2012-10-19 20:59 UTC (permalink / raw
  To: gentoo-commits

commit:     93c0ec06bd5c4a421df92386777c7f3796f5e028
Author:     Reinis Danne <rei4dan <AT> gmail <DOT> com>
AuthorDate: Fri Oct 19 20:48:35 2012 +0000
Commit:     Reinis Danne <rei4dan <AT> gmail <DOT> com>
CommitDate: Fri Oct 19 20:48:35 2012 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=93c0ec06

openbabel-python: Fix typo

---
 .../openbabel-python/openbabel-python-2.3.2.ebuild |    2 +-
 1 files changed, 1 insertions(+), 1 deletions(-)

diff --git a/sci-chemistry/openbabel-python/openbabel-python-2.3.2.ebuild b/sci-chemistry/openbabel-python/openbabel-python-2.3.2.ebuild
index d134fff..18b3718 100644
--- a/sci-chemistry/openbabel-python/openbabel-python-2.3.2.ebuild
+++ b/sci-chemistry/openbabel-python/openbabel-python-2.3.2.ebuild
@@ -53,7 +53,7 @@ src_configure() {
 			-DPYTHON_EXECUTABLE=${PYTHON}
 			-DPYTHON_INCLUDE_DIR=${EPREFIX}/usr/include/${EPYTHON}
 			-DPYTHON_LIBRARY=${EPREFIX}/usr/$(get_libdir)/lib${EPYTHON}.so
-			-DENABLE_TESTS=ON)"
+			-DENABLE_TESTS=ON"
 
 		cmake-utils_src_configure
 	}


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* [gentoo-commits] proj/sci:master commit in: sci-chemistry/openbabel-python/
@ 2012-11-11  9:52 Reinis Danne
  0 siblings, 0 replies; 16+ messages in thread
From: Reinis Danne @ 2012-11-11  9:52 UTC (permalink / raw
  To: gentoo-commits

commit:     d3af8bbc041e004862d0480cf290cc4f9eb820ac
Author:     Reinis Danne <rei4dan <AT> gmail <DOT> com>
AuthorDate: Sat Nov 10 19:25:45 2012 +0000
Commit:     Reinis Danne <rei4dan <AT> gmail <DOT> com>
CommitDate: Sun Nov 11 09:50:49 2012 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=d3af8bbc

openbabel-python: Enter BUILD_DIR in src_install

python-r1.eclass doesn't enter BUILD_DIR in python_foreach_impl.

---
 sci-chemistry/openbabel-python/ChangeLog           |    4 ++++
 .../openbabel-python/openbabel-python-2.3.2.ebuild |    8 +++++++-
 2 files changed, 11 insertions(+), 1 deletions(-)

diff --git a/sci-chemistry/openbabel-python/ChangeLog b/sci-chemistry/openbabel-python/ChangeLog
index 51e3bf6..aa49a85 100644
--- a/sci-chemistry/openbabel-python/ChangeLog
+++ b/sci-chemistry/openbabel-python/ChangeLog
@@ -2,6 +2,10 @@
 # Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+  10 Nov 2012; Reinis Danne <rei4dan@gmail.com> openbabel-python-2.3.2.ebuild:
+  python-r1.eclass doesn't enter BUILD_DIR in python_foreach_impl, do it
+  manually where necessary.
+
 *openbabel-python-2.3.2 (19 Oct 2012)
 
   19 Oct 2012; Reinis Danne <rei4dan@gmail.com> +openbabel-python-2.3.2.ebuild,

diff --git a/sci-chemistry/openbabel-python/openbabel-python-2.3.2.ebuild b/sci-chemistry/openbabel-python/openbabel-python-2.3.2.ebuild
index 18b3718..f24e084 100644
--- a/sci-chemistry/openbabel-python/openbabel-python-2.3.2.ebuild
+++ b/sci-chemistry/openbabel-python/openbabel-python-2.3.2.ebuild
@@ -84,5 +84,11 @@ src_test() {
 }
 
 src_install() {
-	python_foreach_impl cmake -DCOMPONENT=bindings_python -P cmake_install.cmake
+	my_impl_src_install() {
+		cd "${BUILD_DIR}"
+
+		cmake -DCOMPONENT=bindings_python -P cmake_install.cmake
+	}
+
+	python_foreach_impl my_impl_src_install
 }


^ permalink raw reply related	[flat|nested] 16+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-chemistry/openbabel-python/
@ 2013-09-26 20:27 Reinis Danne
  0 siblings, 0 replies; 16+ messages in thread
From: Reinis Danne @ 2013-09-26 20:27 UTC (permalink / raw
  To: gentoo-commits

commit:     331fd5e22b676cf9fc135ca0bf9e956c056dd669
Author:     Reinis Danne <rei4dan <AT> gmail <DOT> com>
AuthorDate: Thu Sep 26 20:19:57 2013 +0000
Commit:     Reinis Danne <rei4dan <AT> gmail <DOT> com>
CommitDate: Thu Sep 26 20:25:20 2013 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=331fd5e2

Add sci-chemistry/openbabel-python live ebuild

---
 sci-chemistry/openbabel-python/ChangeLog           | 10 +++
 sci-chemistry/openbabel-python/metadata.xml        | 12 ++++
 .../openbabel-python/openbabel-python-9999.ebuild  | 84 ++++++++++++++++++++++
 3 files changed, 106 insertions(+)

diff --git a/sci-chemistry/openbabel-python/ChangeLog b/sci-chemistry/openbabel-python/ChangeLog
new file mode 100644
index 0000000..0f52b41
--- /dev/null
+++ b/sci-chemistry/openbabel-python/ChangeLog
@@ -0,0 +1,10 @@
+# ChangeLog for sci-chemistry/openbabel-python
+# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
+# $Header: $
+
+*openbabel-python-9999 (26 Sep 2013)
+
+  26 Sep 2013; Reinis Danne <rei4dan@gmail.com> +openbabel-python-9999.ebuild,
+  +metadata.xml:
+  Add live ebuild.
+

diff --git a/sci-chemistry/openbabel-python/metadata.xml b/sci-chemistry/openbabel-python/metadata.xml
new file mode 100644
index 0000000..f857801
--- /dev/null
+++ b/sci-chemistry/openbabel-python/metadata.xml
@@ -0,0 +1,12 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+  <herd>sci-chemistry</herd>
+  <longdescription>
+    Open Babel is a chemical toolbox designed to speak the many languages of
+    chemical data. It's an open, collaborative project allowing anyone to
+    search, convert, analyze, or store data from molecular modeling, chemistry,
+    solid-state materials, biochemistry, or related areas. This package enables
+    to access Open Babel library from Python programs.
+  </longdescription>
+</pkgmetadata>

diff --git a/sci-chemistry/openbabel-python/openbabel-python-9999.ebuild b/sci-chemistry/openbabel-python/openbabel-python-9999.ebuild
new file mode 100644
index 0000000..f0b1132
--- /dev/null
+++ b/sci-chemistry/openbabel-python/openbabel-python-9999.ebuild
@@ -0,0 +1,84 @@
+# Copyright 1999-2013 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+EAPI=5
+
+PYTHON_COMPAT=( python{2_6,2_7,3_2,3_3} )
+
+inherit cmake-utils eutils git-2 multilib python-r1
+
+DESCRIPTION="Python bindings for OpenBabel (including Pybel)"
+HOMEPAGE="http://openbabel.sourceforge.net/"
+EGIT_REPO_URI="https://github.com/openbabel/openbabel.git"
+
+LICENSE="GPL-2"
+SLOT="0"
+KEYWORDS=""
+IUSE=""
+
+REQUIRED_USE="${PYTHON_REQUIRED_USE}"
+
+RDEPEND="${PYTHON_DEPS}
+	!sci-chemistry/babel
+	~sci-chemistry/openbabel-${PV}
+	sys-libs/zlib"
+DEPEND="${RDEPEND}
+	>=dev-util/cmake-2.4.8
+	>=dev-lang/swig-2"
+
+S="${WORKDIR}"/openbabel-${PV}
+
+src_prepare() {
+	cmake-utils_src_prepare
+	sed \
+		-e "s:\"\.\.\":\"${EPREFIX}/usr\":g" \
+		-i test/testbabel.py || die
+	swig -python -c++ -small -O -templatereduce -naturalvar \
+		-I"${EPREFIX}/usr/include/openbabel-2.0" \
+		-o scripts/python/openbabel-python.cpp \
+		-DHAVE_EIGEN \
+		-outdir scripts/python \
+		scripts/openbabel-python.i \
+		|| die "Regeneration of openbabel-python.cpp failed"
+}
+
+src_configure() {
+	my_impl_src_configure() {
+		local mycmakeargs="${mycmakeargs}
+			-DCMAKE_INSTALL_RPATH=
+			-DBINDINGS_ONLY=ON
+			-DBABEL_SYSTEM_LIBRARY=${EPREFIX}/usr/$(get_libdir)/libopenbabel.so
+			-DOB_MODULE_PATH=${EPREFIX}/usr/$(get_libdir)/openbabel/${PV}
+			-DLIB_INSTALL_DIR=${ED}/usr/$(get_libdir)/${EPYTHON}/site-packages
+			-DPYTHON_BINDINGS=ON
+			-DPYTHON_EXECUTABLE=${PYTHON}
+			-DPYTHON_INCLUDE_DIR=${EPREFIX}/usr/include/${EPYTHON}
+			-DPYTHON_LIBRARY=${EPREFIX}/usr/$(get_libdir)/lib${EPYTHON}.so
+			-DENABLE_TESTS=ON"
+
+		cmake-utils_src_configure
+	}
+
+	python_foreach_impl my_impl_src_configure
+}
+
+src_compile() {
+	python_parallel_foreach_impl cmake-utils_src_make bindings_python
+}
+
+src_test() {
+	python_foreach_impl cmake-utils_src_test -R py
+}
+
+src_install() {
+	my_impl_src_install() {
+		cd "${BUILD_DIR}" || die
+
+		cmake -DCOMPONENT=bindings_python -P cmake_install.cmake
+
+		python_optimize
+	}
+
+	python_foreach_impl my_impl_src_install
+}


^ permalink raw reply related	[flat|nested] 16+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-chemistry/openbabel-python/
@ 2013-11-14 17:30 Reinis Danne
  0 siblings, 0 replies; 16+ messages in thread
From: Reinis Danne @ 2013-11-14 17:30 UTC (permalink / raw
  To: gentoo-commits

commit:     eb968aa7ed7578f013aa2a04a52f47a1d04e6e0e
Author:     Reinis Danne <rei4dan <AT> gmail <DOT> com>
AuthorDate: Thu Nov 14 17:28:36 2013 +0000
Commit:     Reinis Danne <rei4dan <AT> gmail <DOT> com>
CommitDate: Thu Nov 14 17:28:36 2013 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=eb968aa7

sci-chemistry/openbabel-python: Let CMake find module dir

---
 sci-chemistry/openbabel-python/ChangeLog                    | 3 +++
 sci-chemistry/openbabel-python/openbabel-python-9999.ebuild | 3 +--
 2 files changed, 4 insertions(+), 2 deletions(-)

diff --git a/sci-chemistry/openbabel-python/ChangeLog b/sci-chemistry/openbabel-python/ChangeLog
index 0f52b41..f02b86c 100644
--- a/sci-chemistry/openbabel-python/ChangeLog
+++ b/sci-chemistry/openbabel-python/ChangeLog
@@ -2,6 +2,9 @@
 # Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+  14 Nov 2013; Reinis Danne <rei4dan@gmail.com> openbabel-python-9999.ebuild:
+  CMake now is able to find Python module target dir.
+
 *openbabel-python-9999 (26 Sep 2013)
 
   26 Sep 2013; Reinis Danne <rei4dan@gmail.com> +openbabel-python-9999.ebuild,

diff --git a/sci-chemistry/openbabel-python/openbabel-python-9999.ebuild b/sci-chemistry/openbabel-python/openbabel-python-9999.ebuild
index f0b1132..de787dd 100644
--- a/sci-chemistry/openbabel-python/openbabel-python-9999.ebuild
+++ b/sci-chemistry/openbabel-python/openbabel-python-9999.ebuild
@@ -50,7 +50,6 @@ src_configure() {
 			-DBINDINGS_ONLY=ON
 			-DBABEL_SYSTEM_LIBRARY=${EPREFIX}/usr/$(get_libdir)/libopenbabel.so
 			-DOB_MODULE_PATH=${EPREFIX}/usr/$(get_libdir)/openbabel/${PV}
-			-DLIB_INSTALL_DIR=${ED}/usr/$(get_libdir)/${EPYTHON}/site-packages
 			-DPYTHON_BINDINGS=ON
 			-DPYTHON_EXECUTABLE=${PYTHON}
 			-DPYTHON_INCLUDE_DIR=${EPREFIX}/usr/include/${EPYTHON}
@@ -75,7 +74,7 @@ src_install() {
 	my_impl_src_install() {
 		cd "${BUILD_DIR}" || die
 
-		cmake -DCOMPONENT=bindings_python -P cmake_install.cmake
+		DESTDIR=${ED} cmake -DCOMPONENT=bindings_python -P cmake_install.cmake
 
 		python_optimize
 	}


^ permalink raw reply related	[flat|nested] 16+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-chemistry/openbabel-python/
@ 2014-01-06 18:48 Justin Lecher
  0 siblings, 0 replies; 16+ messages in thread
From: Justin Lecher @ 2014-01-06 18:48 UTC (permalink / raw
  To: gentoo-commits

commit:     e3205b4dde5899a6b4ac44eac8d53ca06654537f
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Mon Jan  6 18:39:24 2014 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Mon Jan  6 18:39:24 2014 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=e3205b4d

sci-chemistry/openbabel-python: Switch from git-2 to git-r3

Package-Manager: portage-2.2.8

---
 sci-chemistry/openbabel-python/ChangeLog                    | 5 ++++-
 sci-chemistry/openbabel-python/openbabel-python-9999.ebuild | 5 +++--
 2 files changed, 7 insertions(+), 3 deletions(-)

diff --git a/sci-chemistry/openbabel-python/ChangeLog b/sci-chemistry/openbabel-python/ChangeLog
index f02b86c..7fb1385 100644
--- a/sci-chemistry/openbabel-python/ChangeLog
+++ b/sci-chemistry/openbabel-python/ChangeLog
@@ -1,7 +1,10 @@
 # ChangeLog for sci-chemistry/openbabel-python
-# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
+# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+  06 Jan 2014; Justin Lecher <jlec@gentoo.org> openbabel-python-9999.ebuild:
+  Switch from git-2 to git-r3
+
   14 Nov 2013; Reinis Danne <rei4dan@gmail.com> openbabel-python-9999.ebuild:
   CMake now is able to find Python module target dir.
 

diff --git a/sci-chemistry/openbabel-python/openbabel-python-9999.ebuild b/sci-chemistry/openbabel-python/openbabel-python-9999.ebuild
index de787dd..ba62fbf 100644
--- a/sci-chemistry/openbabel-python/openbabel-python-9999.ebuild
+++ b/sci-chemistry/openbabel-python/openbabel-python-9999.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2013 Gentoo Foundation
+# Copyright 1999-2014 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 # $Header: $
 
@@ -6,10 +6,11 @@ EAPI=5
 
 PYTHON_COMPAT=( python{2_6,2_7,3_2,3_3} )
 
-inherit cmake-utils eutils git-2 multilib python-r1
+inherit cmake-utils eutils git-r3 multilib python-r1
 
 DESCRIPTION="Python bindings for OpenBabel (including Pybel)"
 HOMEPAGE="http://openbabel.sourceforge.net/"
+SRC_URI=""
 EGIT_REPO_URI="https://github.com/openbabel/openbabel.git"
 
 LICENSE="GPL-2"


^ permalink raw reply related	[flat|nested] 16+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-chemistry/openbabel-python/
@ 2014-02-14 18:19 Reinis Danne
  0 siblings, 0 replies; 16+ messages in thread
From: Reinis Danne @ 2014-02-14 18:19 UTC (permalink / raw
  To: gentoo-commits

commit:     f63b2fe477bbe9d9614aacc57299803d0fa6a134
Author:     Reinis Danne <rei4dan <AT> gmail <DOT> com>
AuthorDate: Fri Feb 14 18:08:10 2014 +0000
Commit:     Reinis Danne <rei4dan <AT> gmail <DOT> com>
CommitDate: Fri Feb 14 18:08:10 2014 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=f63b2fe4

sci-chemistry/openbabel-python: Fix move to git-r3

---
 sci-chemistry/openbabel-python/ChangeLog                    | 3 +++
 sci-chemistry/openbabel-python/openbabel-python-9999.ebuild | 2 --
 2 files changed, 3 insertions(+), 2 deletions(-)

diff --git a/sci-chemistry/openbabel-python/ChangeLog b/sci-chemistry/openbabel-python/ChangeLog
index 7fb1385..701f15d 100644
--- a/sci-chemistry/openbabel-python/ChangeLog
+++ b/sci-chemistry/openbabel-python/ChangeLog
@@ -2,6 +2,9 @@
 # Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+  14 Feb 2014; Reinis Danne <rei4dan@gmail.com> openbabel-python-9999.ebuild:
+  Fix move to git-r3.
+
   06 Jan 2014; Justin Lecher <jlec@gentoo.org> openbabel-python-9999.ebuild:
   Switch from git-2 to git-r3
 

diff --git a/sci-chemistry/openbabel-python/openbabel-python-9999.ebuild b/sci-chemistry/openbabel-python/openbabel-python-9999.ebuild
index ba62fbf..a9bf578 100644
--- a/sci-chemistry/openbabel-python/openbabel-python-9999.ebuild
+++ b/sci-chemistry/openbabel-python/openbabel-python-9999.ebuild
@@ -28,8 +28,6 @@ DEPEND="${RDEPEND}
 	>=dev-util/cmake-2.4.8
 	>=dev-lang/swig-2"
 
-S="${WORKDIR}"/openbabel-${PV}
-
 src_prepare() {
 	cmake-utils_src_prepare
 	sed \


^ permalink raw reply related	[flat|nested] 16+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-chemistry/openbabel-python/
@ 2014-06-11 14:47 Reinis Danne
  0 siblings, 0 replies; 16+ messages in thread
From: Reinis Danne @ 2014-06-11 14:47 UTC (permalink / raw
  To: gentoo-commits

commit:     a46f1ddebe4c111f40112ebb7531da4e3cacbd76
Author:     Reinis Danne <rei4dan <AT> gmail <DOT> com>
AuthorDate: Wed Jun 11 14:44:55 2014 +0000
Commit:     Reinis Danne <rei4dan <AT> gmail <DOT> com>
CommitDate: Wed Jun 11 14:44:55 2014 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=a46f1dde

sci-chemistry/openbabel-python: Update PYTHON_COMPAT

---
 sci-chemistry/openbabel-python/ChangeLog                    | 3 +++
 sci-chemistry/openbabel-python/openbabel-python-9999.ebuild | 2 +-
 2 files changed, 4 insertions(+), 1 deletion(-)

diff --git a/sci-chemistry/openbabel-python/ChangeLog b/sci-chemistry/openbabel-python/ChangeLog
index 701f15d..7e4afb9 100644
--- a/sci-chemistry/openbabel-python/ChangeLog
+++ b/sci-chemistry/openbabel-python/ChangeLog
@@ -2,6 +2,9 @@
 # Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+  11 Jun 2014; Reinis Danne <rei4dan@gmail.com> openbabel-python-9999.ebuild:
+  Update PYTHON_COMPAT.
+
   14 Feb 2014; Reinis Danne <rei4dan@gmail.com> openbabel-python-9999.ebuild:
   Fix move to git-r3.
 

diff --git a/sci-chemistry/openbabel-python/openbabel-python-9999.ebuild b/sci-chemistry/openbabel-python/openbabel-python-9999.ebuild
index a9bf578..2ef4a53 100644
--- a/sci-chemistry/openbabel-python/openbabel-python-9999.ebuild
+++ b/sci-chemistry/openbabel-python/openbabel-python-9999.ebuild
@@ -4,7 +4,7 @@
 
 EAPI=5
 
-PYTHON_COMPAT=( python{2_6,2_7,3_2,3_3} )
+PYTHON_COMPAT=( python{2_7,3_2,3_3,3_4} )
 
 inherit cmake-utils eutils git-r3 multilib python-r1
 


^ permalink raw reply related	[flat|nested] 16+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-chemistry/openbabel-python/
@ 2014-09-16 17:01 Christoph Junghans
  0 siblings, 0 replies; 16+ messages in thread
From: Christoph Junghans @ 2014-09-16 17:01 UTC (permalink / raw
  To: gentoo-commits

commit:     904430c3320ae3cbe5c557488488c445f0eba53e
Author:     Christoph Junghans <ottxor <AT> gentoo <DOT> org>
AuthorDate: Tue Sep 16 16:39:34 2014 +0000
Commit:     Christoph Junghans <ottxor <AT> gentoo <DOT> org>
CommitDate: Tue Sep 16 16:39:34 2014 +0000
URL:        http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=904430c3

quote vars

Package-Manager: portage-2.2.8-r1

---
 sci-chemistry/openbabel-python/ChangeLog                  |  5 ++++-
 .../openbabel-python/openbabel-python-9999.ebuild         | 15 ++++++++-------
 2 files changed, 12 insertions(+), 8 deletions(-)

diff --git a/sci-chemistry/openbabel-python/ChangeLog b/sci-chemistry/openbabel-python/ChangeLog
index 7e4afb9..6d021f4 100644
--- a/sci-chemistry/openbabel-python/ChangeLog
+++ b/sci-chemistry/openbabel-python/ChangeLog
@@ -2,6 +2,10 @@
 # Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+  16 Sep 2014; Christoph Junghans <ottxor@gentoo.org>
+  openbabel-python-9999.ebuild:
+  quote vars
+
   11 Jun 2014; Reinis Danne <rei4dan@gmail.com> openbabel-python-9999.ebuild:
   Update PYTHON_COMPAT.
 
@@ -19,4 +23,3 @@
   26 Sep 2013; Reinis Danne <rei4dan@gmail.com> +openbabel-python-9999.ebuild,
   +metadata.xml:
   Add live ebuild.
-

diff --git a/sci-chemistry/openbabel-python/openbabel-python-9999.ebuild b/sci-chemistry/openbabel-python/openbabel-python-9999.ebuild
index 2ef4a53..3a6c090 100644
--- a/sci-chemistry/openbabel-python/openbabel-python-9999.ebuild
+++ b/sci-chemistry/openbabel-python/openbabel-python-9999.ebuild
@@ -44,16 +44,17 @@ src_prepare() {
 
 src_configure() {
 	my_impl_src_configure() {
-		local mycmakeargs="${mycmakeargs}
+		local mycmakeargs=(
 			-DCMAKE_INSTALL_RPATH=
 			-DBINDINGS_ONLY=ON
-			-DBABEL_SYSTEM_LIBRARY=${EPREFIX}/usr/$(get_libdir)/libopenbabel.so
-			-DOB_MODULE_PATH=${EPREFIX}/usr/$(get_libdir)/openbabel/${PV}
+			-DBABEL_SYSTEM_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libopenbabel.so
+			-DOB_MODULE_PATH="${EPREFIX}"/usr/$(get_libdir)/openbabel/${PV}
 			-DPYTHON_BINDINGS=ON
-			-DPYTHON_EXECUTABLE=${PYTHON}
-			-DPYTHON_INCLUDE_DIR=${EPREFIX}/usr/include/${EPYTHON}
-			-DPYTHON_LIBRARY=${EPREFIX}/usr/$(get_libdir)/lib${EPYTHON}.so
-			-DENABLE_TESTS=ON"
+			-DPYTHON_EXECUTABLE="${PYTHON}"
+			-DPYTHON_INCLUDE_DIR="${EPREFIX}"/usr/include/"${EPYTHON}"
+			-DPYTHON_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/lib"${EPYTHON}".so
+			-DENABLE_TESTS=ON
+		)
 
 		cmake-utils_src_configure
 	}


^ permalink raw reply related	[flat|nested] 16+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-chemistry/openbabel-python/
@ 2015-11-11 14:38 Justin Lecher
  0 siblings, 0 replies; 16+ messages in thread
From: Justin Lecher @ 2015-11-11 14:38 UTC (permalink / raw
  To: gentoo-commits

commit:     1899ece8f99460518e2ea401f288e60e062658eb
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Wed Nov 11 14:37:44 2015 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Wed Nov 11 14:37:59 2015 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=1899ece8

sci-chemistry/openbabel-python: Import tree changes

Package-Manager: portage-2.2.23
Signed-off-by: Justin Lecher <jlec <AT> gentoo.org>

 sci-chemistry/openbabel-python/metadata.xml        |  2 +-
 .../openbabel-python/openbabel-python-9999.ebuild  | 23 ++++++++++++----------
 2 files changed, 14 insertions(+), 11 deletions(-)

diff --git a/sci-chemistry/openbabel-python/metadata.xml b/sci-chemistry/openbabel-python/metadata.xml
index 66b2cb7..56c946c 100644
--- a/sci-chemistry/openbabel-python/metadata.xml
+++ b/sci-chemistry/openbabel-python/metadata.xml
@@ -1,4 +1,4 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
 <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
 <pkgmetadata>
   <herd>sci-chemistry</herd>

diff --git a/sci-chemistry/openbabel-python/openbabel-python-9999.ebuild b/sci-chemistry/openbabel-python/openbabel-python-9999.ebuild
index 69c0acd..03c35f6 100644
--- a/sci-chemistry/openbabel-python/openbabel-python-9999.ebuild
+++ b/sci-chemistry/openbabel-python/openbabel-python-9999.ebuild
@@ -1,10 +1,10 @@
-# Copyright 1999-2014 Gentoo Foundation
+# Copyright 1999-2015 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 # $Id$
 
 EAPI=5
 
-PYTHON_COMPAT=( python{2_7,3_3,3_4} )
+PYTHON_COMPAT=( python2_7 python3_{3,4} )
 
 inherit cmake-utils eutils git-r3 multilib python-r1
 
@@ -21,11 +21,9 @@ IUSE=""
 REQUIRED_USE="${PYTHON_REQUIRED_USE}"
 
 RDEPEND="${PYTHON_DEPS}
-	!sci-chemistry/babel
 	~sci-chemistry/openbabel-${PV}
 	sys-libs/zlib"
 DEPEND="${RDEPEND}
-	>=dev-util/cmake-2.4.8
 	>=dev-lang/swig-2"
 
 src_prepare() {
@@ -40,6 +38,9 @@ src_prepare() {
 		-outdir scripts/python \
 		scripts/openbabel-python.i \
 		|| die "Regeneration of openbabel-python.cpp failed"
+	sed \
+		-e '/__GNUC__/s:== 4:>= 4:g' \
+		-i include/openbabel/shared_ptr.h || die
 }
 
 src_configure() {
@@ -47,12 +48,14 @@ src_configure() {
 		local mycmakeargs=(
 			-DCMAKE_INSTALL_RPATH=
 			-DBINDINGS_ONLY=ON
-			-DBABEL_SYSTEM_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libopenbabel.so
-			-DOB_MODULE_PATH="${EPREFIX}"/usr/$(get_libdir)/openbabel/${PV}
+			-DBABEL_SYSTEM_LIBRARY="${EPREFIX}/usr/$(get_libdir)/libopenbabel.so"
+			-DOB_MODULE_PATH="${EPREFIX}/usr/$(get_libdir)/openbabel/${PV}"
+			-DLIB_INSTALL_DIR="${D}$(python_get_sitedir)"
 			-DPYTHON_BINDINGS=ON
-			-DPYTHON_EXECUTABLE="${PYTHON}"
-			-DPYTHON_INCLUDE_DIR="${EPREFIX}"/usr/include/"${EPYTHON}"
-			-DPYTHON_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/lib"${EPYTHON}".so
+			-DPYTHON_EXECUTABLE=${PYTHON}
+			-DPYTHON_INCLUDE_DIR="$(python_get_includedir)"
+			-DPYTHON_INCLUDE_PATH="$(python_get_includedir)"
+			-DPYTHON_LIBRARY="$(python_get_library_path)"
 			-DENABLE_TESTS=ON
 		)
 
@@ -74,7 +77,7 @@ src_install() {
 	my_impl_src_install() {
 		cd "${BUILD_DIR}" || die
 
-		DESTDIR=${ED} cmake -DCOMPONENT=bindings_python -P cmake_install.cmake
+		cmake -DCOMPONENT=bindings_python -P cmake_install.cmake
 
 		python_optimize
 	}


^ permalink raw reply related	[flat|nested] 16+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-chemistry/openbabel-python/
@ 2016-01-06  7:53 Justin Lecher
  0 siblings, 0 replies; 16+ messages in thread
From: Justin Lecher @ 2016-01-06  7:53 UTC (permalink / raw
  To: gentoo-commits

commit:     c6ef627cb6b787a92c3f109df23b7c90074a53b7
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Wed Jan  6 07:52:51 2016 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Wed Jan  6 07:52:51 2016 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=c6ef627c

sci-chemistry/openbabel-python: Fix sanbox problems during installation

respect CXXFLAGS

Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=570516

Package-Manager: portage-2.2.26
Signed-off-by: Justin Lecher <jlec <AT> gentoo.org>

 sci-chemistry/openbabel-python/openbabel-python-9999.ebuild | 5 +++--
 1 file changed, 3 insertions(+), 2 deletions(-)

diff --git a/sci-chemistry/openbabel-python/openbabel-python-9999.ebuild b/sci-chemistry/openbabel-python/openbabel-python-9999.ebuild
index 03c35f6..b80dcf9 100644
--- a/sci-chemistry/openbabel-python/openbabel-python-9999.ebuild
+++ b/sci-chemistry/openbabel-python/openbabel-python-9999.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2015 Gentoo Foundation
+# Copyright 1999-2016 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 # $Id$
 
@@ -47,12 +47,13 @@ src_configure() {
 	my_impl_src_configure() {
 		local mycmakeargs=(
 			-DCMAKE_INSTALL_RPATH=
+			-DOPTIMIZE_NATIVE=OFF
 			-DBINDINGS_ONLY=ON
 			-DBABEL_SYSTEM_LIBRARY="${EPREFIX}/usr/$(get_libdir)/libopenbabel.so"
 			-DOB_MODULE_PATH="${EPREFIX}/usr/$(get_libdir)/openbabel/${PV}"
-			-DLIB_INSTALL_DIR="${D}$(python_get_sitedir)"
 			-DPYTHON_BINDINGS=ON
 			-DPYTHON_EXECUTABLE=${PYTHON}
+			-DCMAKE_INSTALL_PREFIX="${D}/usr"
 			-DPYTHON_INCLUDE_DIR="$(python_get_includedir)"
 			-DPYTHON_INCLUDE_PATH="$(python_get_includedir)"
 			-DPYTHON_LIBRARY="$(python_get_library_path)"


^ permalink raw reply related	[flat|nested] 16+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-chemistry/openbabel-python/
@ 2016-01-07  9:16 Justin Lecher
  0 siblings, 0 replies; 16+ messages in thread
From: Justin Lecher @ 2016-01-07  9:16 UTC (permalink / raw
  To: gentoo-commits

commit:     1ca1c250c1a4c7eaf7899efc1968e6042509e9fd
Author:     Reinis Danne <rei4dan <AT> gmail <DOT> com>
AuthorDate: Wed Jan  6 14:25:47 2016 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Wed Jan  6 14:25:47 2016 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=1ca1c250

sci-chemistry/openbabel-python: Remove obsolete sed

 sci-chemistry/openbabel-python/openbabel-python-9999.ebuild | 3 ---
 1 file changed, 3 deletions(-)

diff --git a/sci-chemistry/openbabel-python/openbabel-python-9999.ebuild b/sci-chemistry/openbabel-python/openbabel-python-9999.ebuild
index b80dcf9..c2a3d19 100644
--- a/sci-chemistry/openbabel-python/openbabel-python-9999.ebuild
+++ b/sci-chemistry/openbabel-python/openbabel-python-9999.ebuild
@@ -38,9 +38,6 @@ src_prepare() {
 		-outdir scripts/python \
 		scripts/openbabel-python.i \
 		|| die "Regeneration of openbabel-python.cpp failed"
-	sed \
-		-e '/__GNUC__/s:== 4:>= 4:g' \
-		-i include/openbabel/shared_ptr.h || die
 }
 
 src_configure() {


^ permalink raw reply related	[flat|nested] 16+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-chemistry/openbabel-python/
@ 2021-01-05 19:38 Andrew Ammerlaan
  0 siblings, 0 replies; 16+ messages in thread
From: Andrew Ammerlaan @ 2021-01-05 19:38 UTC (permalink / raw
  To: gentoo-commits

commit:     f36461f6a9cdfb88e0098e02eea73a1d4d7c6189
Author:     Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
AuthorDate: Tue Jan  5 19:35:27 2021 +0000
Commit:     Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
CommitDate: Tue Jan  5 19:35:27 2021 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=f36461f6

sci-chemistry/openbabel-python: remove pack, py2 only

All versions compatible with openbabel::gentoo are py2 only
There is a PR open to ::gentoo to bump openbabel and add py3
compatible version of openbabel-python to ::gentoo
https://github.com/gentoo/gentoo/pull/16182/files

Package-Manager: Portage-3.0.12, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> riseup.net>

 sci-chemistry/openbabel-python/metadata.xml        | 18 -----
 .../openbabel-python/openbabel-python-9999.ebuild  | 83 ----------------------
 2 files changed, 101 deletions(-)

diff --git a/sci-chemistry/openbabel-python/metadata.xml b/sci-chemistry/openbabel-python/metadata.xml
deleted file mode 100644
index 1acf891c7..000000000
--- a/sci-chemistry/openbabel-python/metadata.xml
+++ /dev/null
@@ -1,18 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer type="project">
-		<email>sci-chemistry@gentoo.org</email>
-		<name>Gentoo Chemistry Project</name>
-	</maintainer>
-	<longdescription>
-Open Babel is a chemical toolbox designed to speak the many languages of
-chemical data. It's an open, collaborative project allowing anyone to
-search, convert, analyze, or store data from molecular modeling, chemistry,
-solid-state materials, biochemistry, or related areas. This package enables
-to access Open Babel library from Python programs.
-</longdescription>
-	<upstream>
-		<remote-id type="sourceforge">openbabel</remote-id>
-	</upstream>
-</pkgmetadata>

diff --git a/sci-chemistry/openbabel-python/openbabel-python-9999.ebuild b/sci-chemistry/openbabel-python/openbabel-python-9999.ebuild
deleted file mode 100644
index 7d4ab0f8e..000000000
--- a/sci-chemistry/openbabel-python/openbabel-python-9999.ebuild
+++ /dev/null
@@ -1,83 +0,0 @@
-# Copyright 1999-2016 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 python3_{3,4} )
-
-inherit cmake-utils eutils git-r3 multilib python-r1
-
-DESCRIPTION="Python bindings for OpenBabel (including Pybel)"
-HOMEPAGE="http://openbabel.sourceforge.net/"
-SRC_URI=""
-EGIT_REPO_URI="https://github.com/openbabel/openbabel.git"
-
-LICENSE="GPL-2"
-SLOT="0"
-KEYWORDS=""
-IUSE=""
-
-REQUIRED_USE="${PYTHON_REQUIRED_USE}"
-
-RDEPEND="${PYTHON_DEPS}
-	~sci-chemistry/openbabel-${PV}
-	sys-libs/zlib"
-DEPEND="${RDEPEND}
-	>=dev-lang/swig-2"
-
-src_prepare() {
-	cmake-utils_src_prepare
-	sed \
-		-e "s:\"\.\.\":\"${EPREFIX}/usr\":g" \
-		-i test/testbabel.py || die
-	swig -python -c++ -small -O -templatereduce -naturalvar \
-		-I"${EPREFIX}/usr/include/openbabel-2.0" \
-		-o scripts/python/openbabel-python.cpp \
-		-DHAVE_EIGEN \
-		-outdir scripts/python \
-		scripts/openbabel-python.i \
-		|| die "Regeneration of openbabel-python.cpp failed"
-}
-
-src_configure() {
-	my_impl_src_configure() {
-		local mycmakeargs=(
-			-DCMAKE_INSTALL_RPATH=
-			-DOPTIMIZE_NATIVE=OFF
-			-DBINDINGS_ONLY=ON
-			-DBABEL_SYSTEM_LIBRARY="${EPREFIX}/usr/$(get_libdir)/libopenbabel.so"
-			-DOB_MODULE_PATH="${EPREFIX}/usr/$(get_libdir)/openbabel/${PV}"
-			-DPYTHON_BINDINGS=ON
-			-DPYTHON_EXECUTABLE=${PYTHON}
-			-DCMAKE_INSTALL_PREFIX="${D}/usr"
-			-DPYTHON_INCLUDE_DIR="$(python_get_includedir)"
-			-DPYTHON_INCLUDE_PATH="$(python_get_includedir)"
-			-DPYTHON_LIBRARY="$(python_get_library_path)"
-			-DENABLE_TESTS=ON
-		)
-
-		cmake-utils_src_configure
-	}
-
-	python_foreach_impl my_impl_src_configure
-}
-
-src_compile() {
-	python_foreach_impl cmake-utils_src_make bindings_python
-}
-
-src_test() {
-	python_foreach_impl cmake-utils_src_test -R py
-}
-
-src_install() {
-	my_impl_src_install() {
-		cd "${BUILD_DIR}" || die
-
-		cmake -DCOMPONENT=bindings_python -P cmake_install.cmake
-
-		python_optimize
-	}
-
-	python_foreach_impl my_impl_src_install
-}


^ permalink raw reply related	[flat|nested] 16+ messages in thread

end of thread, other threads:[~2021-01-05 19:38 UTC | newest]

Thread overview: 16+ messages (download: mbox.gz follow: Atom feed
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2013-11-14 17:30 [gentoo-commits] proj/sci:master commit in: sci-chemistry/openbabel-python/ Reinis Danne
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2021-01-05 19:38 Andrew Ammerlaan
2016-01-07  9:16 Justin Lecher
2016-01-06  7:53 Justin Lecher
2015-11-11 14:38 Justin Lecher
2014-09-16 17:01 Christoph Junghans
2014-06-11 14:47 Reinis Danne
2014-02-14 18:19 Reinis Danne
2014-01-06 18:48 Justin Lecher
2013-09-26 20:27 Reinis Danne
2012-11-11  9:52 Reinis Danne
2012-10-19 20:59 Reinis Danne
2012-10-19 20:40 Reinis Danne
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