* [gentoo-commits] proj/sci:master commit in: sci-biology/pysurfer/
@ 2013-11-16 17:03 Guillaume Horel
0 siblings, 0 replies; 8+ messages in thread
From: Guillaume Horel @ 2013-11-16 17:03 UTC (permalink / raw
To: gentoo-commits
commit: e76dc604824a9498fcdff5200306e12b9bc4cd0d
Author: Martin Luessi <mluessi <AT> nmr <DOT> mgh <DOT> harvard <DOT> edu>
AuthorDate: Sun Nov 10 15:24:03 2013 +0000
Commit: Guillaume Horel <guillaume.horel <AT> gmail <DOT> com>
CommitDate: Sun Nov 10 15:24:03 2013 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=e76dc604
WIP: PySurfer ebuild
---
sci-biology/pysurfer/pysurfer-0.4.ebuild | 22 ++++++++++++++++++++++
1 file changed, 22 insertions(+)
diff --git a/sci-biology/pysurfer/pysurfer-0.4.ebuild b/sci-biology/pysurfer/pysurfer-0.4.ebuild
new file mode 100644
index 0000000..9f53ce5
--- /dev/null
+++ b/sci-biology/pysurfer/pysurfer-0.4.ebuild
@@ -0,0 +1,22 @@
+# Copyright 1999-2013 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+EAPI="5"
+
+PYTHON_COMPAT=( python2_7 )
+
+inherit distutils-r1
+
+DESCRIPTION="Python based program for visualization of data from Freesurfer"
+HOMEPAGE="http://pysurfer.github.com"
+SRC_URI="https://github.com/nipy/PySurfer/archive/${PV}.zip"
+
+LICENSE="BSD"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+
+RDEPEND="sci-visualization/mayavi"
+DEPEND=""
+
+S="${WORKDIR}/PySurfer-${PV}"
^ permalink raw reply related [flat|nested] 8+ messages in thread* [gentoo-commits] proj/sci:master commit in: sci-biology/pysurfer/
@ 2013-11-16 17:03 Guillaume Horel
0 siblings, 0 replies; 8+ messages in thread
From: Guillaume Horel @ 2013-11-16 17:03 UTC (permalink / raw
To: gentoo-commits
commit: 5916bfaa6cc977d48e35ca06b0c37c75f388af2a
Author: Martin Luessi <mluessi <AT> nmr <DOT> mgh <DOT> harvard <DOT> edu>
AuthorDate: Mon Nov 11 12:28:41 2013 +0000
Commit: Guillaume Horel <guillaume.horel <AT> gmail <DOT> com>
CommitDate: Mon Nov 11 12:28:41 2013 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=5916bfaa
use src_prepare, add deps
---
sci-biology/pysurfer/pysurfer-0.4.ebuild | 10 ++++++----
1 file changed, 6 insertions(+), 4 deletions(-)
diff --git a/sci-biology/pysurfer/pysurfer-0.4.ebuild b/sci-biology/pysurfer/pysurfer-0.4.ebuild
index 4bb5dbe..d569fbd 100644
--- a/sci-biology/pysurfer/pysurfer-0.4.ebuild
+++ b/sci-biology/pysurfer/pysurfer-0.4.ebuild
@@ -16,13 +16,15 @@ LICENSE="BSD"
SLOT="0"
KEYWORDS="~amd64 ~x86"
-RDEPEND="sci-visualization/mayavi"
+RDEPEND="sci-visualization/mayavi
+ dev-python/matplotlib
+ sci-libs/nibabel
+ dev-python/numpy
+ sci-libs/scipy"
DEPEND=""
S="${WORKDIR}/PySurfer-${PV}"
-src_unpack() {
- unpack ${A}
- cd "${S}"
+src_prepare() {
epatch "${FILESDIR}/${PV}-headless_build.patch"
}
^ permalink raw reply related [flat|nested] 8+ messages in thread* [gentoo-commits] proj/sci:master commit in: sci-biology/pysurfer/
@ 2013-11-16 17:03 Guillaume Horel
0 siblings, 0 replies; 8+ messages in thread
From: Guillaume Horel @ 2013-11-16 17:03 UTC (permalink / raw
To: gentoo-commits
commit: f92b302b64caef5c1ca3a6ddf079513c45bb07be
Author: Martin Luessi <mluessi <AT> nmr <DOT> mgh <DOT> harvard <DOT> edu>
AuthorDate: Tue Nov 12 15:22:56 2013 +0000
Commit: Guillaume Horel <guillaume.horel <AT> gmail <DOT> com>
CommitDate: Tue Nov 12 15:22:56 2013 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=f92b302b
use PYTHON_USEDEP
---
sci-biology/pysurfer/pysurfer-0.4.ebuild | 10 +++++-----
1 file changed, 5 insertions(+), 5 deletions(-)
diff --git a/sci-biology/pysurfer/pysurfer-0.4.ebuild b/sci-biology/pysurfer/pysurfer-0.4.ebuild
index d569fbd..b941c95 100644
--- a/sci-biology/pysurfer/pysurfer-0.4.ebuild
+++ b/sci-biology/pysurfer/pysurfer-0.4.ebuild
@@ -16,11 +16,11 @@ LICENSE="BSD"
SLOT="0"
KEYWORDS="~amd64 ~x86"
-RDEPEND="sci-visualization/mayavi
- dev-python/matplotlib
- sci-libs/nibabel
- dev-python/numpy
- sci-libs/scipy"
+RDEPEND="sci-visualization/mayavi[${PYTHON_USEDEP}]
+ dev-python/matplotlib[${PYTHON_USEDEP}]
+ sci-libs/nibabel[${PYTHON_USEDEP}]
+ dev-python/numpy[${PYTHON_USEDEP}]
+ sci-libs/scipy[${PYTHON_USEDEP}]"
DEPEND=""
S="${WORKDIR}/PySurfer-${PV}"
^ permalink raw reply related [flat|nested] 8+ messages in thread* [gentoo-commits] proj/sci:master commit in: sci-biology/pysurfer/
@ 2013-11-16 17:03 Guillaume Horel
0 siblings, 0 replies; 8+ messages in thread
From: Guillaume Horel @ 2013-11-16 17:03 UTC (permalink / raw
To: gentoo-commits
commit: a1a3439463d0aa714b6b13405428dab3f04f7be2
Author: Martin Luessi <mluessi <AT> nmr <DOT> mgh <DOT> harvard <DOT> edu>
AuthorDate: Thu Nov 14 14:21:08 2013 +0000
Commit: Guillaume Horel <guillaume.horel <AT> gmail <DOT> com>
CommitDate: Thu Nov 14 14:21:08 2013 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=a1a34394
use PATCHES
---
sci-biology/pysurfer/pysurfer-0.4.ebuild | 5 +----
1 file changed, 1 insertion(+), 4 deletions(-)
diff --git a/sci-biology/pysurfer/pysurfer-0.4.ebuild b/sci-biology/pysurfer/pysurfer-0.4.ebuild
index b941c95..2aec2ae 100644
--- a/sci-biology/pysurfer/pysurfer-0.4.ebuild
+++ b/sci-biology/pysurfer/pysurfer-0.4.ebuild
@@ -24,7 +24,4 @@ RDEPEND="sci-visualization/mayavi[${PYTHON_USEDEP}]
DEPEND=""
S="${WORKDIR}/PySurfer-${PV}"
-
-src_prepare() {
- epatch "${FILESDIR}/${PV}-headless_build.patch"
-}
+PATCHES=( "${FILESDIR}/${PV}-headless_build.patch" )
^ permalink raw reply related [flat|nested] 8+ messages in thread* [gentoo-commits] proj/sci:master commit in: sci-biology/pysurfer/
@ 2013-11-16 17:03 Guillaume Horel
0 siblings, 0 replies; 8+ messages in thread
From: Guillaume Horel @ 2013-11-16 17:03 UTC (permalink / raw
To: gentoo-commits
commit: 13a213b127e8644aeb13f4cfe54e6016dbacf979
Author: Martin Luessi <mluessi <AT> nmr <DOT> mgh <DOT> harvard <DOT> edu>
AuthorDate: Thu Nov 14 21:45:57 2013 +0000
Commit: Guillaume Horel <guillaume.horel <AT> gmail <DOT> com>
CommitDate: Thu Nov 14 21:45:57 2013 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=13a213b1
pysurfer-9999 ebuild
---
sci-biology/pysurfer/pysurfer-9999.ebuild | 25 +++++++++++++++++++++++++
1 file changed, 25 insertions(+)
diff --git a/sci-biology/pysurfer/pysurfer-9999.ebuild b/sci-biology/pysurfer/pysurfer-9999.ebuild
new file mode 100644
index 0000000..6b0e30e
--- /dev/null
+++ b/sci-biology/pysurfer/pysurfer-9999.ebuild
@@ -0,0 +1,25 @@
+# Copyright 1999-2013 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+EAPI="5"
+
+PYTHON_COMPAT=( python2_7 )
+
+inherit distutils-r1 git-2
+
+DESCRIPTION="Python based program for visualization of data from Freesurfer"
+HOMEPAGE="http://pysurfer.github.com"
+EGIT_REPO_URI="https://github.com/nipy/PySurfer.git"
+
+LICENSE="BSD"
+SLOT="0"
+
+RDEPEND="sci-visualization/mayavi[${PYTHON_USEDEP}]
+ dev-python/matplotlib[${PYTHON_USEDEP}]
+ sci-libs/nibabel[${PYTHON_USEDEP}]
+ dev-python/numpy[${PYTHON_USEDEP}]
+ sci-libs/scipy[${PYTHON_USEDEP}]"
+DEPEND=""
+
+S="${WORKDIR}/PySurfer-${PV}"
^ permalink raw reply related [flat|nested] 8+ messages in thread* [gentoo-commits] proj/sci:master commit in: sci-biology/pysurfer/
@ 2014-01-06 19:27 Justin Lecher
0 siblings, 0 replies; 8+ messages in thread
From: Justin Lecher @ 2014-01-06 19:27 UTC (permalink / raw
To: gentoo-commits
commit: 439c685cd6db9361b066aaeeb67b8e675e76cc6d
Author: Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Mon Jan 6 18:51:58 2014 +0000
Commit: Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Mon Jan 6 18:51:58 2014 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=439c685c
sci-biology/pysurfer: Switch from git-2 to git-r3
Package-Manager: portage-2.2.8
---
sci-biology/pysurfer/ChangeLog | 8 ++++++++
sci-biology/pysurfer/metadata.xml | 5 +++++
sci-biology/pysurfer/pysurfer-0.4.ebuild | 14 ++++++++------
sci-biology/pysurfer/pysurfer-9999.ebuild | 16 +++++++++-------
4 files changed, 30 insertions(+), 13 deletions(-)
diff --git a/sci-biology/pysurfer/ChangeLog b/sci-biology/pysurfer/ChangeLog
new file mode 100644
index 0000000..2c2a0a8
--- /dev/null
+++ b/sci-biology/pysurfer/ChangeLog
@@ -0,0 +1,8 @@
+# ChangeLog for sci-biology/pysurfer
+# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
+# $Header: $
+
+ 06 Jan 2014; Justin Lecher <jlec@gentoo.org> pysurfer-0.4.ebuild,
+ pysurfer-9999.ebuild, +metadata.xml:
+ Switch from git-2 to git-r3
+
diff --git a/sci-biology/pysurfer/metadata.xml b/sci-biology/pysurfer/metadata.xml
new file mode 100644
index 0000000..897aa2e
--- /dev/null
+++ b/sci-biology/pysurfer/metadata.xml
@@ -0,0 +1,5 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+ <herd>sci</herd>
+</pkgmetadata>
diff --git a/sci-biology/pysurfer/pysurfer-0.4.ebuild b/sci-biology/pysurfer/pysurfer-0.4.ebuild
index 2aec2ae..5d64174 100644
--- a/sci-biology/pysurfer/pysurfer-0.4.ebuild
+++ b/sci-biology/pysurfer/pysurfer-0.4.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2013 Gentoo Foundation
+# Copyright 1999-2014 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: $
@@ -16,12 +16,14 @@ LICENSE="BSD"
SLOT="0"
KEYWORDS="~amd64 ~x86"
-RDEPEND="sci-visualization/mayavi[${PYTHON_USEDEP}]
- dev-python/matplotlib[${PYTHON_USEDEP}]
- sci-libs/nibabel[${PYTHON_USEDEP}]
- dev-python/numpy[${PYTHON_USEDEP}]
- sci-libs/scipy[${PYTHON_USEDEP}]"
+RDEPEND="
+ sci-visualization/mayavi[${PYTHON_USEDEP}]
+ dev-python/matplotlib[${PYTHON_USEDEP}]
+ sci-libs/nibabel[${PYTHON_USEDEP}]
+ dev-python/numpy[${PYTHON_USEDEP}]
+ sci-libs/scipy[${PYTHON_USEDEP}]"
DEPEND=""
S="${WORKDIR}/PySurfer-${PV}"
+
PATCHES=( "${FILESDIR}/${PV}-headless_build.patch" )
diff --git a/sci-biology/pysurfer/pysurfer-9999.ebuild b/sci-biology/pysurfer/pysurfer-9999.ebuild
index 6b0e30e..3a5768a 100644
--- a/sci-biology/pysurfer/pysurfer-9999.ebuild
+++ b/sci-biology/pysurfer/pysurfer-9999.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2013 Gentoo Foundation
+# Copyright 1999-2014 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: $
@@ -6,20 +6,22 @@ EAPI="5"
PYTHON_COMPAT=( python2_7 )
-inherit distutils-r1 git-2
+inherit distutils-r1 git-r3
DESCRIPTION="Python based program for visualization of data from Freesurfer"
HOMEPAGE="http://pysurfer.github.com"
+SRC_URI=""
EGIT_REPO_URI="https://github.com/nipy/PySurfer.git"
LICENSE="BSD"
SLOT="0"
-RDEPEND="sci-visualization/mayavi[${PYTHON_USEDEP}]
- dev-python/matplotlib[${PYTHON_USEDEP}]
- sci-libs/nibabel[${PYTHON_USEDEP}]
- dev-python/numpy[${PYTHON_USEDEP}]
- sci-libs/scipy[${PYTHON_USEDEP}]"
+RDEPEND="
+ sci-visualization/mayavi[${PYTHON_USEDEP}]
+ dev-python/matplotlib[${PYTHON_USEDEP}]
+ sci-libs/nibabel[${PYTHON_USEDEP}]
+ dev-python/numpy[${PYTHON_USEDEP}]
+ sci-libs/scipy[${PYTHON_USEDEP}]"
DEPEND=""
S="${WORKDIR}/PySurfer-${PV}"
^ permalink raw reply related [flat|nested] 8+ messages in thread* [gentoo-commits] proj/sci:master commit in: sci-biology/pysurfer/
@ 2015-10-01 6:06 Justin Lecher
0 siblings, 0 replies; 8+ messages in thread
From: Justin Lecher @ 2015-10-01 6:06 UTC (permalink / raw
To: gentoo-commits
commit: b069176d36ebb776309c489ca6977b60b5887624
Author: Horea Christian <h.chr <AT> mail <DOT> ru>
AuthorDate: Wed Sep 30 12:16:45 2015 +0000
Commit: Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Wed Sep 30 12:16:45 2015 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=b069176d
new manifest and archive name for sci-biology/pysurfer
Package-Manager: portage-2.2.21
sci-biology/pysurfer/ChangeLog | 6 ++++--
sci-biology/pysurfer/pysurfer-0.4.ebuild | 4 ++--
2 files changed, 6 insertions(+), 4 deletions(-)
diff --git a/sci-biology/pysurfer/ChangeLog b/sci-biology/pysurfer/ChangeLog
index 04462c3..ca0c424 100644
--- a/sci-biology/pysurfer/ChangeLog
+++ b/sci-biology/pysurfer/ChangeLog
@@ -1,8 +1,10 @@
# ChangeLog for sci-biology/pysurfer
-# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
+# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
# $Id$
+ 30 Sep 2015; Horea Christian <h.chr@mail.ru> pysurfer-0.4.ebuild:
+ new manifest and archive name for sci-biology/pysurfer
+
06 Jan 2014; Justin Lecher <jlec@gentoo.org> pysurfer-0.4.ebuild,
pysurfer-9999.ebuild, +metadata.xml:
Switch from git-2 to git-r3
-
diff --git a/sci-biology/pysurfer/pysurfer-0.4.ebuild b/sci-biology/pysurfer/pysurfer-0.4.ebuild
index bf92862..33a3beb 100644
--- a/sci-biology/pysurfer/pysurfer-0.4.ebuild
+++ b/sci-biology/pysurfer/pysurfer-0.4.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2014 Gentoo Foundation
+# Copyright 1999-2015 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Id$
@@ -10,7 +10,7 @@ inherit distutils-r1
DESCRIPTION="Python based program for visualization of data from Freesurfer"
HOMEPAGE="http://pysurfer.github.com"
-SRC_URI="https://github.com/nipy/PySurfer/archive/${PV}.zip"
+SRC_URI="https://github.com/nipy/PySurfer/archive/${PV}.zip -> ${P}.zip"
LICENSE="BSD"
SLOT="0"
^ permalink raw reply related [flat|nested] 8+ messages in thread* [gentoo-commits] proj/sci:master commit in: sci-biology/pysurfer/
@ 2015-10-01 6:06 Justin Lecher
0 siblings, 0 replies; 8+ messages in thread
From: Justin Lecher @ 2015-10-01 6:06 UTC (permalink / raw
To: gentoo-commits
commit: 2b004e9968944be006e70f7806332597263da7e1
Author: Horea Christian <h.chr <AT> mail <DOT> ru>
AuthorDate: Wed Sep 30 12:22:36 2015 +0000
Commit: Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Wed Sep 30 12:22:36 2015 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=2b004e99
sci-biology/pysurfer: version bump
Package-Manager: portage-2.2.21
sci-biology/pysurfer/ChangeLog | 5 +++++
sci-biology/pysurfer/pysurfer-0.6.ebuild | 29 +++++++++++++++++++++++++++++
2 files changed, 34 insertions(+)
diff --git a/sci-biology/pysurfer/ChangeLog b/sci-biology/pysurfer/ChangeLog
index ca0c424..183b683 100644
--- a/sci-biology/pysurfer/ChangeLog
+++ b/sci-biology/pysurfer/ChangeLog
@@ -2,6 +2,11 @@
# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
# $Id$
+*pysurfer-0.6 (30 Sep 2015)
+
+ 30 Sep 2015; Horea Christian <h.chr@mail.ru> +pysurfer-0.6.ebuild:
+ sci-biology/pysurfer: version bump
+
30 Sep 2015; Horea Christian <h.chr@mail.ru> pysurfer-0.4.ebuild:
new manifest and archive name for sci-biology/pysurfer
diff --git a/sci-biology/pysurfer/pysurfer-0.6.ebuild b/sci-biology/pysurfer/pysurfer-0.6.ebuild
new file mode 100644
index 0000000..33a3beb
--- /dev/null
+++ b/sci-biology/pysurfer/pysurfer-0.6.ebuild
@@ -0,0 +1,29 @@
+# Copyright 1999-2015 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI="5"
+
+PYTHON_COMPAT=( python2_7 )
+
+inherit distutils-r1
+
+DESCRIPTION="Python based program for visualization of data from Freesurfer"
+HOMEPAGE="http://pysurfer.github.com"
+SRC_URI="https://github.com/nipy/PySurfer/archive/${PV}.zip -> ${P}.zip"
+
+LICENSE="BSD"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+
+RDEPEND="
+ sci-visualization/mayavi[${PYTHON_USEDEP}]
+ dev-python/matplotlib[${PYTHON_USEDEP}]
+ sci-libs/nibabel[${PYTHON_USEDEP}]
+ dev-python/numpy[${PYTHON_USEDEP}]
+ sci-libs/scipy[${PYTHON_USEDEP}]"
+DEPEND=""
+
+S="${WORKDIR}/PySurfer-${PV}"
+
+PATCHES=( "${FILESDIR}/${PV}-headless_build.patch" )
^ permalink raw reply related [flat|nested] 8+ messages in thread
end of thread, other threads:[~2015-10-01 6:07 UTC | newest]
Thread overview: 8+ messages (download: mbox.gz follow: Atom feed
-- links below jump to the message on this page --
2013-11-16 17:03 [gentoo-commits] proj/sci:master commit in: sci-biology/pysurfer/ Guillaume Horel
-- strict thread matches above, loose matches on Subject: below --
2013-11-16 17:03 Guillaume Horel
2013-11-16 17:03 Guillaume Horel
2013-11-16 17:03 Guillaume Horel
2013-11-16 17:03 Guillaume Horel
2014-01-06 19:27 Justin Lecher
2015-10-01 6:06 Justin Lecher
2015-10-01 6:06 Justin Lecher
This is a public inbox, see mirroring instructions
for how to clone and mirror all data and code used for this inbox