From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) by finch.gentoo.org (Postfix) with ESMTP id 5F4EF1381F3 for ; Tue, 27 Aug 2013 15:40:19 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id A2320E0C3A; Tue, 27 Aug 2013 15:40:05 +0000 (UTC) Received: from smtp.gentoo.org (smtp.gentoo.org [140.211.166.183]) (using TLSv1 with cipher AECDH-AES256-SHA (256/256 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id 1C57FE0C3A for ; Tue, 27 Aug 2013 15:39:59 +0000 (UTC) Received: from hornbill.gentoo.org (hornbill.gentoo.org [94.100.119.163]) (using TLSv1 with cipher AECDH-AES256-SHA (256/256 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id 0567933EC91 for ; Tue, 27 Aug 2013 15:39:59 +0000 (UTC) Received: from localhost.localdomain (localhost [127.0.0.1]) by hornbill.gentoo.org (Postfix) with ESMTP id D1C30E546F for ; Tue, 27 Aug 2013 15:39:55 +0000 (UTC) From: "André Erdmann" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "André Erdmann" Message-ID: <1377617926.f08ec4d99dd1534efe8b8743fae4ace5ae9d9957.dywi@gentoo> Subject: [gentoo-commits] proj/R_overlay:master commit in: config/simple-deprules.d/ X-VCS-Repository: proj/R_overlay X-VCS-Files: config/simple-deprules.d/R config/simple-deprules.d/dev config/simple-deprules.d/ignored_text config/simple-deprules.d/media config/simple-deprules.d/misc config/simple-deprules.d/sci config/simple-deprules.d/system.set X-VCS-Directories: config/simple-deprules.d/ X-VCS-Committer: dywi X-VCS-Committer-Name: André Erdmann X-VCS-Revision: f08ec4d99dd1534efe8b8743fae4ace5ae9d9957 X-VCS-Branch: master Date: Tue, 27 Aug 2013 15:39:55 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Archives-Salt: 54312361-523d-49da-98c3-69bad2351576 X-Archives-Hash: 7a6e4b2f2276679e369021fe1daa7ad9 commit: f08ec4d99dd1534efe8b8743fae4ace5ae9d9957 Author: André Erdmann mailerd de> AuthorDate: Tue Aug 27 15:38:46 2013 +0000 Commit: André Erdmann mailerd de> CommitDate: Tue Aug 27 15:38:46 2013 +0000 URL: http://git.overlays.gentoo.org/gitweb/?p=proj/R_overlay.git;a=commit;h=f08ec4d9 more dependency rules --- config/simple-deprules.d/R | 1 + config/simple-deprules.d/dev | 12 +++++++++++- config/simple-deprules.d/ignored_text | 8 ++++++++ config/simple-deprules.d/media | 10 +++++++++- config/simple-deprules.d/misc | 9 +++++++++ config/simple-deprules.d/sci | 9 +++++++++ config/simple-deprules.d/system.set | 1 + 7 files changed, 48 insertions(+), 2 deletions(-) diff --git a/config/simple-deprules.d/R b/config/simple-deprules.d/R index ecb78fd..ceb82da 100644 --- a/config/simple-deprules.d/R +++ b/config/simple-deprules.d/R @@ -29,6 +29,7 @@ dev-lang/R[tk] { grid KernSmooth lattice + libR MASS Matrix methods diff --git a/config/simple-deprules.d/dev b/config/simple-deprules.d/dev index 01603a1..bed0153 100644 --- a/config/simple-deprules.d/dev +++ b/config/simple-deprules.d/dev @@ -39,7 +39,13 @@ dev-java/jdbc-postgresql:: PostgreSQL JDBCdriver dev-lang/lua :: lua version>= 5.1.4 ~dev-lang/lua :: lua -~dev-tex/pgf :: pgf +~dev-tex/pgf { + pgf +} + +>=dev-tex/pgf-2.10 { + pgf (>=2.10) (http://sourceforge.net/projects/pgf/)for the vignette +} ~dev-tcltk/bwidget { bwidget @@ -53,10 +59,14 @@ dev-util/cmake { cmake (http://www.cmake.org) } +# FIXME: the jdk rules are not quite correct, +# virtual/jdk:1.6 (probably) works for some packages, too +# # resolve "java 5", "java 1.5" ... as 'virtual/jdk:1.5' ~virtual/jdk:slotparts=i1.5:restrict=1.5,5.0 { java Java 1.4 or later + Java 1.5 or higher Java version java runtime } diff --git a/config/simple-deprules.d/ignored_text b/config/simple-deprules.d/ignored_text index a2567e2..bd4e8ae 100644 --- a/config/simple-deprules.d/ignored_text +++ b/config/simple-deprules.d/ignored_text @@ -57,8 +57,16 @@ its development files library (version2.2.0 or later) libraries(See README.REQ) + Google Chrome for Windows + for externalization + writing some graphicformats + available athttp://www.monetdb.org + it is used in the demos too). } +# that's a hardware requirement +! :: double-precision AMD or Nvidia GPU + % :: Linux # ignore "Windows" in dependency fields: diff --git a/config/simple-deprules.d/media b/config/simple-deprules.d/media index 365455f..41d8a03 100644 --- a/config/simple-deprules.d/media +++ b/config/simple-deprules.d/media @@ -8,8 +8,13 @@ media-sound/csound { ~media-gfx/imagemagick { imagemagick +} + +#deptype all +media-gfx/imagemagick { Image Magick (for reading non PPM format) } +#deptype sys media-gfx/graphviz :: dot from graphviz ~media-gfx/graphviz { @@ -28,7 +33,10 @@ virtual/ffmpeg { ffmpeg } -media-gfx/dcraw :: dcraw(for reading RAW images). +media-gfx/dcraw { + dcraw(for reading RAW images). + dcraw (for readingRAW images). +} media-libs/fontconfig { fontconfig diff --git a/config/simple-deprules.d/misc b/config/simple-deprules.d/misc index 9a1bae1..9157f64 100644 --- a/config/simple-deprules.d/misc +++ b/config/simple-deprules.d/misc @@ -5,3 +5,12 @@ dev-vcs/git { >=app-emulation/wine-1.5.26 { wine (>= wine-1.5.26) } + + +# spGoogle 0.1.2 from CRAN wants "Google Chrome" or "Firefox" +# TODO: check whether this dep can be dropped/ignored or other browsers +# would suffice, too +# +|| ( www-client/google-chrome www-client/firefox www-client/firefox-bin ) { + Linux users orFirefox just for Linux users. +} diff --git a/config/simple-deprules.d/sci b/config/simple-deprules.d/sci index 4e5363a..70521d9 100644 --- a/config/simple-deprules.d/sci +++ b/config/simple-deprules.d/sci @@ -62,6 +62,10 @@ sci-biology/ncbi-tools++ { ncbi-tools++ } +sci-biology/kalign { + kalign +} + sci-mathematics/glpk { libglpk-dev onDebian/Ubuntu) } @@ -74,6 +78,11 @@ sci-mathematics/glpk { glpk } +#deptype pkg +sci-mathematics/rstudio { + manipulate +} + #deptype sys # == misc == diff --git a/config/simple-deprules.d/system.set b/config/simple-deprules.d/system.set index 828d995..78ae160 100644 --- a/config/simple-deprules.d/system.set +++ b/config/simple-deprules.d/system.set @@ -3,6 +3,7 @@ # @system ! { GNU Make + GNU Make forexternalization andg++ GNU compiler (a nvcc-compatible version of g++ is needed andg++ GNU compiler version 3.4 (version 4.4 is not yet compatiblewith nvcc). chmod)