* [gentoo-commits] proj/sci:master commit in: sci-physics/lammps/
@ 2013-05-10 16:06 Nicolas Bock
0 siblings, 0 replies; 34+ messages in thread
From: Nicolas Bock @ 2013-05-10 16:06 UTC (permalink / raw
To: gentoo-commits
commit: ce1e979e80fb73161ac6c78d5eff3d338d36f60b
Author: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
AuthorDate: Fri May 10 16:06:01 2013 +0000
Commit: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
CommitDate: Fri May 10 16:06:01 2013 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=ce1e979e
Added maintainer (myself) to metadata.xml for lammps.
Package-Manager: portage-2.2.0_alpha174
---
sci-physics/lammps/ChangeLog | 3 +++
sci-physics/lammps/metadata.xml | 3 +++
2 files changed, 6 insertions(+), 0 deletions(-)
diff --git a/sci-physics/lammps/ChangeLog b/sci-physics/lammps/ChangeLog
index d717a18..160731f 100644
--- a/sci-physics/lammps/ChangeLog
+++ b/sci-physics/lammps/ChangeLog
@@ -2,6 +2,9 @@
# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+ 10 May 2013; Nicolas Bock <nicolasbock@gmail.com> metadata.xml:
+ Added maintainer (myself) to metadata.xml for lammps.
+
*lammps-20130512 (10 May 2013)
10 May 2013; Nicolas Bock <nicolasbock@gmail.com>
diff --git a/sci-physics/lammps/metadata.xml b/sci-physics/lammps/metadata.xml
index 69268b8..e98e56e 100644
--- a/sci-physics/lammps/metadata.xml
+++ b/sci-physics/lammps/metadata.xml
@@ -15,5 +15,8 @@
techniques and a spatial-decomposition of the simulation domain. The
code is designed to be easy to modify or extend with new functionality.
</longdescription>
+ <maintainer>
+ <email>nicolasbock@gmail.com</email>
+ </maintainer>
</pkgmetadata>
^ permalink raw reply related [flat|nested] 34+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-physics/lammps/
@ 2013-05-10 17:34 Nicolas Bock
0 siblings, 0 replies; 34+ messages in thread
From: Nicolas Bock @ 2013-05-10 17:34 UTC (permalink / raw
To: gentoo-commits
commit: 01c396413a587dadcb32bb1324a078711d1a1f1e
Author: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
AuthorDate: Fri May 10 17:34:05 2013 +0000
Commit: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
CommitDate: Fri May 10 17:34:05 2013 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=01c39641
lammps: Added use flags for some optional packages.
Package-Manager: portage-2.2.0_alpha174
---
sci-physics/lammps/ChangeLog | 4 ++++
sci-physics/lammps/lammps-20130512.ebuild | 8 +++++++-
sci-physics/lammps/metadata.xml | 5 +++++
3 files changed, 16 insertions(+), 1 deletions(-)
diff --git a/sci-physics/lammps/ChangeLog b/sci-physics/lammps/ChangeLog
index 160731f..74fe165 100644
--- a/sci-physics/lammps/ChangeLog
+++ b/sci-physics/lammps/ChangeLog
@@ -2,6 +2,10 @@
# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+ 10 May 2013; Nicolas Bock <nicolasbock@gmail.com> lammps-20130512.ebuild,
+ metadata.xml:
+ lammps: Added use flags for some optional packages.
+
10 May 2013; Nicolas Bock <nicolasbock@gmail.com> metadata.xml:
Added maintainer (myself) to metadata.xml for lammps.
diff --git a/sci-physics/lammps/lammps-20130512.ebuild b/sci-physics/lammps/lammps-20130512.ebuild
index 328c94e..bd23dab 100644
--- a/sci-physics/lammps/lammps-20130512.ebuild
+++ b/sci-physics/lammps/lammps-20130512.ebuild
@@ -15,7 +15,7 @@ SRC_URI="http://lammps.sandia.gov/tars/lammps-${LAMMPSDATE}.tar.gz"
LICENSE="GPL-2"
SLOT="0"
KEYWORDS="~amd64 ~x86"
-IUSE=""
+IUSE="package-meam package-dipole package-rigid"
DEPEND=""
RDEPEND="${DEPEND}"
@@ -28,6 +28,12 @@ src_prepare() {
src_compile() {
emake -C src ARCHIVE=$(tc-getAR) CC=$(tc-getCXX) CCFLAGS="${CXXFLAGS}" LINKFLAGS="${LDFLAGS}" stubs
+ use package-meam && {
+ emake -C src ARCHIVE=$(tc-getAR) CC=$(tc-getCXX) CCFLAGS="${CXXFLAGS}" LINKFLAGS="${LDFLAGS}" yes-meam
+ emake -C lib/meam -f Makefile.gfortran ARCHIVE=$(tc-getAR) F90=$(tc-getFC) F90FLAGS="${FCFLAGS}" LINKFLAGS="${LDFLAGS}"
+ }
+ use package-dipole && emake -C src ARCHIVE=$(tc-getAR) CC=$(tc-getCXX) CCFLAGS="${CXXFLAGS}" LINKFLAGS="${LDFLAGS}" yes-dipole
+ use package-rigid && emake -C src ARCHIVE=$(tc-getAR) CC=$(tc-getCXX) CCFLAGS="${CXXFLAGS}" LINKFLAGS="${LDFLAGS}" yes-rigid
emake -C src ARCHIVE=$(tc-getAR) CC=$(tc-getCXX) CCFLAGS="${CXXFLAGS}" LINKFLAGS="${LDFLAGS}" gentoo-serial
}
diff --git a/sci-physics/lammps/metadata.xml b/sci-physics/lammps/metadata.xml
index e98e56e..58f1011 100644
--- a/sci-physics/lammps/metadata.xml
+++ b/sci-physics/lammps/metadata.xml
@@ -15,6 +15,11 @@
techniques and a spatial-decomposition of the simulation domain. The
code is designed to be easy to modify or extend with new functionality.
</longdescription>
+ <use>
+ <flag name="package-meam">modified EAM potential</flag>
+ <flag name="package-dipole">point dipole particles</flag>
+ <flag name="package-rigid">rigid bodies</flag>
+ </use>
<maintainer>
<email>nicolasbock@gmail.com</email>
</maintainer>
^ permalink raw reply related [flat|nested] 34+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-physics/lammps/
@ 2013-05-10 17:46 Nicolas Bock
0 siblings, 0 replies; 34+ messages in thread
From: Nicolas Bock @ 2013-05-10 17:46 UTC (permalink / raw
To: gentoo-commits
commit: acae03bbb074d10bba3fce56ce6cb03b117e42ce
Author: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
AuthorDate: Fri May 10 17:46:10 2013 +0000
Commit: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
CommitDate: Fri May 10 17:46:10 2013 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=acae03bb
The meam package doesn't like to be built in parallel.
Package-Manager: portage-2.2.0_alpha174
---
sci-physics/lammps/ChangeLog | 3 +++
sci-physics/lammps/lammps-20130512.ebuild | 2 +-
2 files changed, 4 insertions(+), 1 deletions(-)
diff --git a/sci-physics/lammps/ChangeLog b/sci-physics/lammps/ChangeLog
index 74fe165..2f95cec 100644
--- a/sci-physics/lammps/ChangeLog
+++ b/sci-physics/lammps/ChangeLog
@@ -2,6 +2,9 @@
# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+ 10 May 2013; Nicolas Bock <nicolasbock@gmail.com> lammps-20130512.ebuild:
+ The meam package doesn't like to be built in parallel.
+
10 May 2013; Nicolas Bock <nicolasbock@gmail.com> lammps-20130512.ebuild,
metadata.xml:
lammps: Added use flags for some optional packages.
diff --git a/sci-physics/lammps/lammps-20130512.ebuild b/sci-physics/lammps/lammps-20130512.ebuild
index bd23dab..dd44632 100644
--- a/sci-physics/lammps/lammps-20130512.ebuild
+++ b/sci-physics/lammps/lammps-20130512.ebuild
@@ -30,7 +30,7 @@ src_compile() {
emake -C src ARCHIVE=$(tc-getAR) CC=$(tc-getCXX) CCFLAGS="${CXXFLAGS}" LINKFLAGS="${LDFLAGS}" stubs
use package-meam && {
emake -C src ARCHIVE=$(tc-getAR) CC=$(tc-getCXX) CCFLAGS="${CXXFLAGS}" LINKFLAGS="${LDFLAGS}" yes-meam
- emake -C lib/meam -f Makefile.gfortran ARCHIVE=$(tc-getAR) F90=$(tc-getFC) F90FLAGS="${FCFLAGS}" LINKFLAGS="${LDFLAGS}"
+ emake -j1 -C lib/meam -f Makefile.gfortran ARCHIVE=$(tc-getAR) F90=$(tc-getFC) F90FLAGS="${FCFLAGS}" LINKFLAGS="${LDFLAGS}"
}
use package-dipole && emake -C src ARCHIVE=$(tc-getAR) CC=$(tc-getCXX) CCFLAGS="${CXXFLAGS}" LINKFLAGS="${LDFLAGS}" yes-dipole
use package-rigid && emake -C src ARCHIVE=$(tc-getAR) CC=$(tc-getCXX) CCFLAGS="${CXXFLAGS}" LINKFLAGS="${LDFLAGS}" yes-rigid
^ permalink raw reply related [flat|nested] 34+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-physics/lammps/
@ 2013-05-10 18:31 Nicolas Bock
0 siblings, 0 replies; 34+ messages in thread
From: Nicolas Bock @ 2013-05-10 18:31 UTC (permalink / raw
To: gentoo-commits
commit: eb0620a4ea1ca7a64fb5db7d98b9967a9305f900
Author: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
AuthorDate: Fri May 10 18:30:46 2013 +0000
Commit: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
CommitDate: Fri May 10 18:30:46 2013 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=eb0620a4
Cleaned up the make command line arguments.
Package-Manager: portage-2.2.0_alpha174
---
sci-physics/lammps/ChangeLog | 3 ++
sci-physics/lammps/lammps-20130512.ebuild | 33 +++++++++++++++++++++++-----
2 files changed, 30 insertions(+), 6 deletions(-)
diff --git a/sci-physics/lammps/ChangeLog b/sci-physics/lammps/ChangeLog
index 2f95cec..7beafc6 100644
--- a/sci-physics/lammps/ChangeLog
+++ b/sci-physics/lammps/ChangeLog
@@ -3,6 +3,9 @@
# $Header: $
10 May 2013; Nicolas Bock <nicolasbock@gmail.com> lammps-20130512.ebuild:
+ Cleaned up the make command line arguments.
+
+ 10 May 2013; Nicolas Bock <nicolasbock@gmail.com> lammps-20130512.ebuild:
The meam package doesn't like to be built in parallel.
10 May 2013; Nicolas Bock <nicolasbock@gmail.com> lammps-20130512.ebuild,
diff --git a/sci-physics/lammps/lammps-20130512.ebuild b/sci-physics/lammps/lammps-20130512.ebuild
index dd44632..28d26e4 100644
--- a/sci-physics/lammps/lammps-20130512.ebuild
+++ b/sci-physics/lammps/lammps-20130512.ebuild
@@ -22,19 +22,40 @@ RDEPEND="${DEPEND}"
S="${WORKDIR}/${PN}-${LAMMPSDATE}"
+LAMMPS_INCLUDEFLAGS="-DLAMMPS_GZIP -DLAMMPS_MEMALIGN"
+
src_prepare() {
epatch "${FILESDIR}/Makefile.gentoo-serial.patch"
+
+ # Patch up the patch.
+ sed -i \
+ -e "s/ARCHIVE\s*=.*$/ARCHIVE = $(tc-getAR)/" \
+ -e "s/CC\s*=.*$/CC = $(tc-getCXX)/" \
+ -e "s/CCFLAGS\s*=.*$/CCFLAGS = ${CXXFLAGS}/" \
+ -e "s/LINK\s*=.*$/LINK = $(tc-getCXX)/" \
+ -e "s/LINKFLAGS\s*=.*$/LINKFLAGS = ${LDFLAGS}/" \
+ -e "s/LMP_INC\s*=.*$/LMP_INC = ${LAMMPS_INCLUDEFLAGS}/" \
+ "${S}/src/MAKE/Makefile.gentoo-serial"
+
+ # Patch up other makefiles.
+ use package-meam && sed -i \
+ -e "s/ARCHIVE\s*=.*$/ARCHIVE = $(tc-getAR)/" \
+ -e "s/F90\s*=.*$/F90 = $(tc-getFC)/" \
+ -e "s/F90FLAGS\s*=.*$/F90FLAGS = ${FCFLAGS}/" \
+ -e "s/LINK\s*=.*$/LINK = $(tc-getFC)/" \
+ -e "s/LINKFLAGS\s*=.*$/LINKFLAGS = ${LDFLAGS}/" \
+ "${S}/lib/meam/Makefile.gfortran"
}
src_compile() {
- emake -C src ARCHIVE=$(tc-getAR) CC=$(tc-getCXX) CCFLAGS="${CXXFLAGS}" LINKFLAGS="${LDFLAGS}" stubs
+ emake -C src stubs
use package-meam && {
- emake -C src ARCHIVE=$(tc-getAR) CC=$(tc-getCXX) CCFLAGS="${CXXFLAGS}" LINKFLAGS="${LDFLAGS}" yes-meam
- emake -j1 -C lib/meam -f Makefile.gfortran ARCHIVE=$(tc-getAR) F90=$(tc-getFC) F90FLAGS="${FCFLAGS}" LINKFLAGS="${LDFLAGS}"
+ emake -C src yes-meam
+ emake -j1 -C lib/meam -f Makefile.gfortran
}
- use package-dipole && emake -C src ARCHIVE=$(tc-getAR) CC=$(tc-getCXX) CCFLAGS="${CXXFLAGS}" LINKFLAGS="${LDFLAGS}" yes-dipole
- use package-rigid && emake -C src ARCHIVE=$(tc-getAR) CC=$(tc-getCXX) CCFLAGS="${CXXFLAGS}" LINKFLAGS="${LDFLAGS}" yes-rigid
- emake -C src ARCHIVE=$(tc-getAR) CC=$(tc-getCXX) CCFLAGS="${CXXFLAGS}" LINKFLAGS="${LDFLAGS}" gentoo-serial
+ use package-dipole && emake -C src yes-dipole
+ use package-rigid && emake -C src yes-rigid
+ emake -C src gentoo-serial
}
src_install() {
^ permalink raw reply related [flat|nested] 34+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-physics/lammps/
@ 2013-05-10 21:54 Nicolas Bock
0 siblings, 0 replies; 34+ messages in thread
From: Nicolas Bock @ 2013-05-10 21:54 UTC (permalink / raw
To: gentoo-commits
commit: 1d40023814ab26ee8e869b34cc020cdb58f31d1e
Author: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
AuthorDate: Fri May 10 21:53:52 2013 +0000
Commit: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
CommitDate: Fri May 10 21:53:52 2013 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=1d400238
Added more use flags to control the build process.
It seems, at least on my system, that the LAMMPS_MEMALIGN option is a
guarantee for a segfault. I made the use of this macro optional.
Package-Manager: portage-2.2.0_alpha174
---
sci-physics/lammps/ChangeLog | 6 ++++++
sci-physics/lammps/lammps-20130512.ebuild | 7 +++++--
sci-physics/lammps/metadata.xml | 5 +++++
3 files changed, 16 insertions(+), 2 deletions(-)
diff --git a/sci-physics/lammps/ChangeLog b/sci-physics/lammps/ChangeLog
index 7beafc6..b78b535 100644
--- a/sci-physics/lammps/ChangeLog
+++ b/sci-physics/lammps/ChangeLog
@@ -2,6 +2,12 @@
# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+ 10 May 2013; Nicolas Bock <nicolasbock@gmail.com> lammps-20130512.ebuild,
+ metadata.xml:
+ Added more use flags to control the build process. It seems, at least on my
+ system, that the LAMMPS_MEMALIGN option is a guarantee for a segfault. I made
+ the use of this macro optional.
+
10 May 2013; Nicolas Bock <nicolasbock@gmail.com> lammps-20130512.ebuild:
Cleaned up the make command line arguments.
diff --git a/sci-physics/lammps/lammps-20130512.ebuild b/sci-physics/lammps/lammps-20130512.ebuild
index 28d26e4..878d095 100644
--- a/sci-physics/lammps/lammps-20130512.ebuild
+++ b/sci-physics/lammps/lammps-20130512.ebuild
@@ -15,18 +15,21 @@ SRC_URI="http://lammps.sandia.gov/tars/lammps-${LAMMPSDATE}.tar.gz"
LICENSE="GPL-2"
SLOT="0"
KEYWORDS="~amd64 ~x86"
-IUSE="package-meam package-dipole package-rigid"
+IUSE="lammps-gzip lammps-memalign package-meam package-dipole package-rigid"
DEPEND=""
RDEPEND="${DEPEND}"
S="${WORKDIR}/${PN}-${LAMMPSDATE}"
-LAMMPS_INCLUDEFLAGS="-DLAMMPS_GZIP -DLAMMPS_MEMALIGN"
+LAMMPS_INCLUDEFLAGS=""
src_prepare() {
epatch "${FILESDIR}/Makefile.gentoo-serial.patch"
+ use lammps-gzip && LAMMPS_INCLUDEFLAGS+=" -DLAMMPS_GZIP"
+ use lammps-memalign && LAMMPS_INCLUDEFLAGS+=" -DLAMMPS_MEMALIGN"
+
# Patch up the patch.
sed -i \
-e "s/ARCHIVE\s*=.*$/ARCHIVE = $(tc-getAR)/" \
diff --git a/sci-physics/lammps/metadata.xml b/sci-physics/lammps/metadata.xml
index 58f1011..4b18020 100644
--- a/sci-physics/lammps/metadata.xml
+++ b/sci-physics/lammps/metadata.xml
@@ -16,6 +16,11 @@
code is designed to be easy to modify or extend with new functionality.
</longdescription>
<use>
+ <flag name="lammps-gzip">The read_data and dump commands will read/write
+ gzipped files</flag>
+ <flag name="lammps-memalign">Enables the use of the posix_memalign()
+ call instead of malloc() when large chunks or memory are allocated
+ by LAMMPS</flag>
<flag name="package-meam">modified EAM potential</flag>
<flag name="package-dipole">point dipole particles</flag>
<flag name="package-rigid">rigid bodies</flag>
^ permalink raw reply related [flat|nested] 34+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-physics/lammps/
@ 2013-05-10 22:05 Nicolas Bock
0 siblings, 0 replies; 34+ messages in thread
From: Nicolas Bock @ 2013-05-10 22:05 UTC (permalink / raw
To: gentoo-commits
commit: 4b129f0b001c2d5e513ebee1fdbfa3bf12b478f0
Author: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
AuthorDate: Fri May 10 22:05:36 2013 +0000
Commit: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
CommitDate: Fri May 10 22:05:36 2013 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=4b129f0b
Moved a variable definition.
Package-Manager: portage-2.2.0_alpha174
---
sci-physics/lammps/ChangeLog | 3 +++
sci-physics/lammps/lammps-20130512.ebuild | 3 +--
2 files changed, 4 insertions(+), 2 deletions(-)
diff --git a/sci-physics/lammps/ChangeLog b/sci-physics/lammps/ChangeLog
index b78b535..93b6717 100644
--- a/sci-physics/lammps/ChangeLog
+++ b/sci-physics/lammps/ChangeLog
@@ -2,6 +2,9 @@
# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+ 10 May 2013; Nicolas Bock <nicolasbock@gmail.com> lammps-20130512.ebuild:
+ Moved a variable definition.
+
10 May 2013; Nicolas Bock <nicolasbock@gmail.com> lammps-20130512.ebuild,
metadata.xml:
Added more use flags to control the build process. It seems, at least on my
diff --git a/sci-physics/lammps/lammps-20130512.ebuild b/sci-physics/lammps/lammps-20130512.ebuild
index 878d095..dd8c6c4 100644
--- a/sci-physics/lammps/lammps-20130512.ebuild
+++ b/sci-physics/lammps/lammps-20130512.ebuild
@@ -22,11 +22,10 @@ RDEPEND="${DEPEND}"
S="${WORKDIR}/${PN}-${LAMMPSDATE}"
-LAMMPS_INCLUDEFLAGS=""
-
src_prepare() {
epatch "${FILESDIR}/Makefile.gentoo-serial.patch"
+ LAMMPS_INCLUDEFLAGS=""
use lammps-gzip && LAMMPS_INCLUDEFLAGS+=" -DLAMMPS_GZIP"
use lammps-memalign && LAMMPS_INCLUDEFLAGS+=" -DLAMMPS_MEMALIGN"
^ permalink raw reply related [flat|nested] 34+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-physics/lammps/
@ 2013-05-16 21:22 Nicolas Bock
0 siblings, 0 replies; 34+ messages in thread
From: Nicolas Bock @ 2013-05-16 21:22 UTC (permalink / raw
To: gentoo-commits
commit: 0c393120f3861bb68e998e8b016ae58b4173f915
Author: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
AuthorDate: Thu May 16 21:21:42 2013 +0000
Commit: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
CommitDate: Thu May 16 21:21:42 2013 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=0c393120
Fixed spelling in doc install.
Package-Manager: portage-2.2.0_alpha175
---
sci-physics/lammps/ChangeLog | 3 +++
sci-physics/lammps/lammps-20130514.ebuild | 6 +++---
2 files changed, 6 insertions(+), 3 deletions(-)
diff --git a/sci-physics/lammps/ChangeLog b/sci-physics/lammps/ChangeLog
index e395b8e..d05235d 100644
--- a/sci-physics/lammps/ChangeLog
+++ b/sci-physics/lammps/ChangeLog
@@ -2,6 +2,9 @@
# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+ 16 May 2013; Nicolas Bock <nicolasbock@gmail.com> lammps-20130514.ebuild:
+ Fixed spelling in doc install.
+
*lammps-20130514 (16 May 2013)
16 May 2013; Nicolas Bock <nicolasbock@gmail.com> +lammps-20130514.ebuild:
diff --git a/sci-physics/lammps/lammps-20130514.ebuild b/sci-physics/lammps/lammps-20130514.ebuild
index 14c5331..b087d83 100644
--- a/sci-physics/lammps/lammps-20130514.ebuild
+++ b/sci-physics/lammps/lammps-20130514.ebuild
@@ -62,11 +62,11 @@ src_compile() {
}
src_install() {
- newbin "$S/src/lmp_serial" "lmp"
+ newbin "src/lmp_serial" "lmp"
if use examples; then
insinto "/usr/share/doc/${PF}"
- doins -r "${S}/examples"
+ doins -r "examples"
fi
dodoc README
- use doc && dohtml -r "${S}/docs/*.html"
+ use doc && dodoc "doc/Manual.pdf"
}
^ permalink raw reply related [flat|nested] 34+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-physics/lammps/
@ 2013-05-16 21:22 Nicolas Bock
0 siblings, 0 replies; 34+ messages in thread
From: Nicolas Bock @ 2013-05-16 21:22 UTC (permalink / raw
To: gentoo-commits
commit: b875dc0c3e4255989230ee945b5603fe86ca0f2c
Author: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
AuthorDate: Thu May 16 15:36:46 2013 +0000
Commit: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
CommitDate: Thu May 16 15:36:46 2013 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=b875dc0c
Version bump to 14 May 2013.
Package-Manager: portage-2.2.0_alpha174
---
sci-physics/lammps/ChangeLog | 5 ++
sci-physics/lammps/lammps-20130514.ebuild | 72 +++++++++++++++++++++++++++++
2 files changed, 77 insertions(+), 0 deletions(-)
diff --git a/sci-physics/lammps/ChangeLog b/sci-physics/lammps/ChangeLog
index f502d84..e395b8e 100644
--- a/sci-physics/lammps/ChangeLog
+++ b/sci-physics/lammps/ChangeLog
@@ -2,6 +2,11 @@
# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+*lammps-20130514 (16 May 2013)
+
+ 16 May 2013; Nicolas Bock <nicolasbock@gmail.com> +lammps-20130514.ebuild:
+ Version bump to 14 May 2013.
+
15 May 2013; Nicolas Bock <nicolasbock@gmail.com> lammps-20130512.ebuild
-files/Makefile.gentoo-serial.patch:
Added mpi use flag. This ebuild builds either the serial version (without the
diff --git a/sci-physics/lammps/lammps-20130514.ebuild b/sci-physics/lammps/lammps-20130514.ebuild
new file mode 100644
index 0000000..14c5331
--- /dev/null
+++ b/sci-physics/lammps/lammps-20130514.ebuild
@@ -0,0 +1,72 @@
+# Copyright 1999-2013 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+EAPI=5
+
+FORTRAN_NEEDED="package-meam"
+
+inherit eutils fortran-2
+
+LAMMPSDATE="14May13"
+
+DESCRIPTION="Large-scale Atomic/Molecular Massively Parallel Simulator"
+HOMEPAGE="http://lammps.sandia.gov/"
+SRC_URI="http://lammps.sandia.gov/tars/lammps-${LAMMPSDATE}.tar.gz"
+
+LICENSE="GPL-2"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+IUSE="doc examples gzip lammps-memalign mpi package-dipole package-meam package-rigid"
+
+DEPEND="mpi? ( virtual/mpi )"
+RDEPEND="${DEPEND}"
+
+S="${WORKDIR}/${PN}-${LAMMPSDATE}"
+
+lmp_emake() {
+ local LAMMPS_INCLUDEFLAGS=
+ use gzip && LAMMPS_INCLUDEFLAGS+=" -DLAMMPS_GZIP"
+ use lammps-memalign && LAMMPS_INCLUDEFLAGS+=" -DLAMMPS_MEMALIGN"
+
+ # Note: The lammps makefile uses CC to indicate the C++ compiler.
+ emake \
+ ARCHIVE=$(tc-getAR) \
+ CC=$(use mpi && echo mpic++ || echo $(tc-getCXX)) \
+ F90=$(use mpi && echo mpif90 || echo $(tc-getFC)) \
+ LINK=$(use mpi && echo mpic++ || echo $(tc-getCXX)) \
+ CCFLAGS="${CXXFLAGS}" \
+ F90FLAGS="${FCFLAGS}" \
+ LINKFLAGS="${LDFLAGS}" \
+ LMP_INC="${LAMMPS_INCLUDEFLAGS}" \
+ MPI_INC=$(use mpi || echo -I../STUBS) \
+ MPI_PATH=$(use mpi || echo -L../STUBS) \
+ MPI_LIB=$(use mpi || echo -lmpi_stubs) \
+ "$@"
+}
+
+src_compile() {
+ # Compile stubs for serial version.
+ use mpi || lmp_emake -C src stubs
+
+ # Build optional packages.
+ if use package-meam; then
+ lmp_emake -C src yes-meam
+ lmp_emake -j1 -C lib/meam -f Makefile.gfortran
+ fi
+ use package-dipole && emake -C src yes-dipole
+ use package-rigid && emake -C src yes-rigid
+
+ # Compile.
+ lmp_emake -C src serial
+}
+
+src_install() {
+ newbin "$S/src/lmp_serial" "lmp"
+ if use examples; then
+ insinto "/usr/share/doc/${PF}"
+ doins -r "${S}/examples"
+ fi
+ dodoc README
+ use doc && dohtml -r "${S}/docs/*.html"
+}
^ permalink raw reply related [flat|nested] 34+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-physics/lammps/
@ 2013-05-28 19:46 Nicolas Bock
0 siblings, 0 replies; 34+ messages in thread
From: Nicolas Bock @ 2013-05-28 19:46 UTC (permalink / raw
To: gentoo-commits
commit: 3f9b55c3f449117dd9fa4502af7b8a4f8e3cb9d9
Author: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
AuthorDate: Tue May 28 19:45:34 2013 +0000
Commit: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
CommitDate: Tue May 28 19:45:34 2013 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=3f9b55c3
Added html documentation.
Package-Manager: portage-2.2.0_alpha177
---
sci-physics/lammps/ChangeLog | 3 +++
sci-physics/lammps/lammps-20130514.ebuild | 7 +++++--
2 files changed, 8 insertions(+), 2 deletions(-)
diff --git a/sci-physics/lammps/ChangeLog b/sci-physics/lammps/ChangeLog
index d05235d..b29dfd1 100644
--- a/sci-physics/lammps/ChangeLog
+++ b/sci-physics/lammps/ChangeLog
@@ -2,6 +2,9 @@
# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+ 28 May 2013; Nicolas Bock <nicolasbock@gmail.com> lammps-20130514.ebuild:
+ Added html documentation.
+
16 May 2013; Nicolas Bock <nicolasbock@gmail.com> lammps-20130514.ebuild:
Fixed spelling in doc install.
diff --git a/sci-physics/lammps/lammps-20130514.ebuild b/sci-physics/lammps/lammps-20130514.ebuild
index b087d83..61c2e12 100644
--- a/sci-physics/lammps/lammps-20130514.ebuild
+++ b/sci-physics/lammps/lammps-20130514.ebuild
@@ -65,8 +65,11 @@ src_install() {
newbin "src/lmp_serial" "lmp"
if use examples; then
insinto "/usr/share/doc/${PF}"
- doins -r "examples"
+ doins -r examples
fi
dodoc README
- use doc && dodoc "doc/Manual.pdf"
+ if use doc; then
+ dodoc doc/Manual.pdf
+ dohtml -r doc
+ fi
}
^ permalink raw reply related [flat|nested] 34+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-physics/lammps/
@ 2013-05-28 19:53 Nicolas Bock
0 siblings, 0 replies; 34+ messages in thread
From: Nicolas Bock @ 2013-05-28 19:53 UTC (permalink / raw
To: gentoo-commits
commit: f40a6bfc5ac24bafe6e3e8bada5a1e438da44506
Author: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
AuthorDate: Tue May 28 19:52:35 2013 +0000
Commit: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
CommitDate: Tue May 28 19:52:35 2013 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=f40a6bfc
Version bump.
Package-Manager: portage-2.2.0_alpha177
---
sci-physics/lammps/ChangeLog | 5 +++
sci-physics/lammps/lammps-20130526.ebuild | 75 +++++++++++++++++++++++++++++++
2 files changed, 80 insertions(+)
diff --git a/sci-physics/lammps/ChangeLog b/sci-physics/lammps/ChangeLog
index b29dfd1..decccfa 100644
--- a/sci-physics/lammps/ChangeLog
+++ b/sci-physics/lammps/ChangeLog
@@ -2,6 +2,11 @@
# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+*lammps-20130526 (28 May 2013)
+
+ 28 May 2013; Nicolas Bock <nicolasbock@gmail.com> +lammps-20130526.ebuild:
+ Version bump.
+
28 May 2013; Nicolas Bock <nicolasbock@gmail.com> lammps-20130514.ebuild:
Added html documentation.
diff --git a/sci-physics/lammps/lammps-20130526.ebuild b/sci-physics/lammps/lammps-20130526.ebuild
new file mode 100644
index 0000000..198fd2f
--- /dev/null
+++ b/sci-physics/lammps/lammps-20130526.ebuild
@@ -0,0 +1,75 @@
+# Copyright 1999-2013 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+EAPI=5
+
+FORTRAN_NEEDED="package-meam"
+
+inherit eutils fortran-2
+
+LAMMPSDATE="26May13"
+
+DESCRIPTION="Large-scale Atomic/Molecular Massively Parallel Simulator"
+HOMEPAGE="http://lammps.sandia.gov/"
+SRC_URI="http://lammps.sandia.gov/tars/lammps-${LAMMPSDATE}.tar.gz"
+
+LICENSE="GPL-2"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+IUSE="doc examples gzip lammps-memalign mpi package-dipole package-meam package-rigid"
+
+DEPEND="mpi? ( virtual/mpi )"
+RDEPEND="${DEPEND}"
+
+S="${WORKDIR}/${PN}-${LAMMPSDATE}"
+
+lmp_emake() {
+ local LAMMPS_INCLUDEFLAGS=
+ use gzip && LAMMPS_INCLUDEFLAGS+=" -DLAMMPS_GZIP"
+ use lammps-memalign && LAMMPS_INCLUDEFLAGS+=" -DLAMMPS_MEMALIGN"
+
+ # Note: The lammps makefile uses CC to indicate the C++ compiler.
+ emake \
+ ARCHIVE=$(tc-getAR) \
+ CC=$(use mpi && echo mpic++ || echo $(tc-getCXX)) \
+ F90=$(use mpi && echo mpif90 || echo $(tc-getFC)) \
+ LINK=$(use mpi && echo mpic++ || echo $(tc-getCXX)) \
+ CCFLAGS="${CXXFLAGS}" \
+ F90FLAGS="${FCFLAGS}" \
+ LINKFLAGS="${LDFLAGS}" \
+ LMP_INC="${LAMMPS_INCLUDEFLAGS}" \
+ MPI_INC=$(use mpi || echo -I../STUBS) \
+ MPI_PATH=$(use mpi || echo -L../STUBS) \
+ MPI_LIB=$(use mpi || echo -lmpi_stubs) \
+ "$@"
+}
+
+src_compile() {
+ # Compile stubs for serial version.
+ use mpi || lmp_emake -C src stubs
+
+ # Build optional packages.
+ if use package-meam; then
+ lmp_emake -C src yes-meam
+ lmp_emake -j1 -C lib/meam -f Makefile.gfortran
+ fi
+ use package-dipole && emake -C src yes-dipole
+ use package-rigid && emake -C src yes-rigid
+
+ # Compile.
+ lmp_emake -C src serial
+}
+
+src_install() {
+ newbin "src/lmp_serial" "lmp"
+ if use examples; then
+ insinto "/usr/share/doc/${PF}"
+ doins -r examples
+ fi
+ dodoc README
+ if use doc; then
+ dodoc doc/Manual.pdf
+ dohtml -r doc
+ fi
+}
^ permalink raw reply related [flat|nested] 34+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-physics/lammps/
@ 2013-05-28 20:06 Nicolas Bock
0 siblings, 0 replies; 34+ messages in thread
From: Nicolas Bock @ 2013-05-28 20:06 UTC (permalink / raw
To: gentoo-commits
commit: 561458721d2f23f7134f8b91db35ccd8bb39af50
Author: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
AuthorDate: Tue May 28 20:05:48 2013 +0000
Commit: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
CommitDate: Tue May 28 20:05:48 2013 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=56145872
Moved html documentation one folder up.
Package-Manager: portage-2.2.0_alpha177
---
sci-physics/lammps/ChangeLog | 3 +++
sci-physics/lammps/lammps-20130526.ebuild | 2 +-
2 files changed, 4 insertions(+), 1 deletion(-)
diff --git a/sci-physics/lammps/ChangeLog b/sci-physics/lammps/ChangeLog
index decccfa..7e5c044 100644
--- a/sci-physics/lammps/ChangeLog
+++ b/sci-physics/lammps/ChangeLog
@@ -2,6 +2,9 @@
# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+ 28 May 2013; Nicolas Bock <nicolasbock@gmail.com> lammps-20130526.ebuild:
+ Moved html documentation one folder up.
+
*lammps-20130526 (28 May 2013)
28 May 2013; Nicolas Bock <nicolasbock@gmail.com> +lammps-20130526.ebuild:
diff --git a/sci-physics/lammps/lammps-20130526.ebuild b/sci-physics/lammps/lammps-20130526.ebuild
index 198fd2f..fe092cf 100644
--- a/sci-physics/lammps/lammps-20130526.ebuild
+++ b/sci-physics/lammps/lammps-20130526.ebuild
@@ -70,6 +70,6 @@ src_install() {
dodoc README
if use doc; then
dodoc doc/Manual.pdf
- dohtml -r doc
+ dohtml -r doc/*
fi
}
^ permalink raw reply related [flat|nested] 34+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-physics/lammps/
@ 2013-06-26 5:04 Christoph Junghans
0 siblings, 0 replies; 34+ messages in thread
From: Christoph Junghans @ 2013-06-26 5:04 UTC (permalink / raw
To: gentoo-commits
commit: 3114fa5fef6a9d59605bc0ca3463329f86862964
Author: Christoph Junghans <ottxor <AT> gentoo <DOT> org>
AuthorDate: Wed Jun 26 05:03:54 2013 +0000
Commit: Christoph Junghans <ottxor <AT> gentoo <DOT> org>
CommitDate: Wed Jun 26 05:03:54 2013 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=3114fa5f
clean up
Package-Manager: portage-2.2.0_alpha185
---
sci-physics/lammps/ChangeLog | 3 +++
sci-physics/lammps/lammps-20130526.ebuild | 25 ++++++++++++-------------
2 files changed, 15 insertions(+), 13 deletions(-)
diff --git a/sci-physics/lammps/ChangeLog b/sci-physics/lammps/ChangeLog
index 7e5c044..7734e65 100644
--- a/sci-physics/lammps/ChangeLog
+++ b/sci-physics/lammps/ChangeLog
@@ -2,6 +2,9 @@
# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+ 26 Jun 2013; Christoph Junghans <ottxor@gentoo.org> lammps-20130526.ebuild:
+ clean up
+
28 May 2013; Nicolas Bock <nicolasbock@gmail.com> lammps-20130526.ebuild:
Moved html documentation one folder up.
diff --git a/sci-physics/lammps/lammps-20130526.ebuild b/sci-physics/lammps/lammps-20130526.ebuild
index fe092cf..af4830c 100644
--- a/sci-physics/lammps/lammps-20130526.ebuild
+++ b/sci-physics/lammps/lammps-20130526.ebuild
@@ -8,40 +8,39 @@ FORTRAN_NEEDED="package-meam"
inherit eutils fortran-2
-LAMMPSDATE="26May13"
+MY_P="${PN}-$(date -d "${PV}" +"%d%b%y")"
DESCRIPTION="Large-scale Atomic/Molecular Massively Parallel Simulator"
HOMEPAGE="http://lammps.sandia.gov/"
-SRC_URI="http://lammps.sandia.gov/tars/lammps-${LAMMPSDATE}.tar.gz"
+SRC_URI="http://lammps.sandia.gov/tars/${MY_P}.tar.gz"
LICENSE="GPL-2"
SLOT="0"
-KEYWORDS="~amd64 ~x86"
+KEYWORDS="~amd64"
IUSE="doc examples gzip lammps-memalign mpi package-dipole package-meam package-rigid"
DEPEND="mpi? ( virtual/mpi )"
RDEPEND="${DEPEND}"
-S="${WORKDIR}/${PN}-${LAMMPSDATE}"
+S="${WORKDIR}/${MY_P}"
lmp_emake() {
- local LAMMPS_INCLUDEFLAGS=
- use gzip && LAMMPS_INCLUDEFLAGS+=" -DLAMMPS_GZIP"
- use lammps-memalign && LAMMPS_INCLUDEFLAGS+=" -DLAMMPS_MEMALIGN"
+ local LAMMPS_INCLUDEFLAGS="$(usex gzip '-DLAMMPS_GZIP' '')"
+ LAMMPS_INCLUDEFLAGS+="$(usex ' -DLAMMPS_MEMALIGN' '')"
# Note: The lammps makefile uses CC to indicate the C++ compiler.
emake \
ARCHIVE=$(tc-getAR) \
- CC=$(use mpi && echo mpic++ || echo $(tc-getCXX)) \
- F90=$(use mpi && echo mpif90 || echo $(tc-getFC)) \
- LINK=$(use mpi && echo mpic++ || echo $(tc-getCXX)) \
+ CC=$(usex mpi "mpic++" "$(tc-getCXX)") \
+ F90=$(usex mpi "mpif90" "$(tc-getFC)") \
+ LINK=$(usex mpi "mpic++" "$(tc-getCXX)") \
CCFLAGS="${CXXFLAGS}" \
F90FLAGS="${FCFLAGS}" \
LINKFLAGS="${LDFLAGS}" \
LMP_INC="${LAMMPS_INCLUDEFLAGS}" \
- MPI_INC=$(use mpi || echo -I../STUBS) \
- MPI_PATH=$(use mpi || echo -L../STUBS) \
- MPI_LIB=$(use mpi || echo -lmpi_stubs) \
+ MPI_INC=$(usex mpi '' "-I../STUBS") \
+ MPI_PATH=$(usex mpi '' '-L../STUBS') \
+ MPI_LIB=$(usex mpi '' '-lmpi_stubs') \
"$@"
}
^ permalink raw reply related [flat|nested] 34+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-physics/lammps/
@ 2013-06-26 16:31 Nicolas Bock
0 siblings, 0 replies; 34+ messages in thread
From: Nicolas Bock @ 2013-06-26 16:31 UTC (permalink / raw
To: gentoo-commits
commit: 2c5177e49869b09accc6acaa46dd656d033b17b6
Author: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
AuthorDate: Wed Jun 26 16:31:09 2013 +0000
Commit: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
CommitDate: Wed Jun 26 16:31:09 2013 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=2c5177e4
Fixed missing use flag.
Package-Manager: portage-2.2.0_alpha185
---
sci-physics/lammps/ChangeLog | 3 +++
sci-physics/lammps/lammps-20130526.ebuild | 2 +-
2 files changed, 4 insertions(+), 1 deletion(-)
diff --git a/sci-physics/lammps/ChangeLog b/sci-physics/lammps/ChangeLog
index 7734e65..23023fc 100644
--- a/sci-physics/lammps/ChangeLog
+++ b/sci-physics/lammps/ChangeLog
@@ -2,6 +2,9 @@
# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+ 26 Jun 2013; Nicolas Bock <nicolasbock@gmail.com> lammps-20130526.ebuild:
+ Fixed missing use flag.
+
26 Jun 2013; Christoph Junghans <ottxor@gentoo.org> lammps-20130526.ebuild:
clean up
diff --git a/sci-physics/lammps/lammps-20130526.ebuild b/sci-physics/lammps/lammps-20130526.ebuild
index af4830c..ff7c442 100644
--- a/sci-physics/lammps/lammps-20130526.ebuild
+++ b/sci-physics/lammps/lammps-20130526.ebuild
@@ -26,7 +26,7 @@ S="${WORKDIR}/${MY_P}"
lmp_emake() {
local LAMMPS_INCLUDEFLAGS="$(usex gzip '-DLAMMPS_GZIP' '')"
- LAMMPS_INCLUDEFLAGS+="$(usex ' -DLAMMPS_MEMALIGN' '')"
+ LAMMPS_INCLUDEFLAGS+="$(usex lammps-memalign ' -DLAMMPS_MEMALIGN' '')"
# Note: The lammps makefile uses CC to indicate the C++ compiler.
emake \
^ permalink raw reply related [flat|nested] 34+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-physics/lammps/
@ 2013-06-26 18:33 Nicolas Bock
0 siblings, 0 replies; 34+ messages in thread
From: Nicolas Bock @ 2013-06-26 18:33 UTC (permalink / raw
To: gentoo-commits
commit: fc3eca20c4318ed31aa1e9b924b38cba48e6bab0
Author: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
AuthorDate: Wed Jun 26 18:32:29 2013 +0000
Commit: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
CommitDate: Wed Jun 26 18:32:29 2013 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=fc3eca20
Bashified package name mangling.
Thanks to ottxor for suggesting and helpful discussions.
Package-Manager: portage-2.2.0_alpha185
---
sci-physics/lammps/ChangeLog | 4 ++++
sci-physics/lammps/lammps-20130526.ebuild | 33 ++++++++++++++++++++++++++++++-
2 files changed, 36 insertions(+), 1 deletion(-)
diff --git a/sci-physics/lammps/ChangeLog b/sci-physics/lammps/ChangeLog
index 23023fc..ac52ff6 100644
--- a/sci-physics/lammps/ChangeLog
+++ b/sci-physics/lammps/ChangeLog
@@ -3,6 +3,10 @@
# $Header: $
26 Jun 2013; Nicolas Bock <nicolasbock@gmail.com> lammps-20130526.ebuild:
+ Bashified package name mangling. Thanks to ottxor for suggesting and helpful
+ discussions.
+
+ 26 Jun 2013; Nicolas Bock <nicolasbock@gmail.com> lammps-20130526.ebuild:
Fixed missing use flag.
26 Jun 2013; Christoph Junghans <ottxor@gentoo.org> lammps-20130526.ebuild:
diff --git a/sci-physics/lammps/lammps-20130526.ebuild b/sci-physics/lammps/lammps-20130526.ebuild
index ff7c442..cfc247b 100644
--- a/sci-physics/lammps/lammps-20130526.ebuild
+++ b/sci-physics/lammps/lammps-20130526.ebuild
@@ -8,7 +8,38 @@ FORTRAN_NEEDED="package-meam"
inherit eutils fortran-2
-MY_P="${PN}-$(date -d "${PV}" +"%d%b%y")"
+convert_month() {
+ case $1 in
+ 01) echo Jan
+ ;;
+ 02) echo Feb
+ ;;
+ 03) echo Mar
+ ;;
+ 04) echo Apr
+ ;;
+ 05) echo May
+ ;;
+ 06) echo Jun
+ ;;
+ 07) echo Jul
+ ;;
+ 08) echo Aug
+ ;;
+ 09) echo Sep
+ ;;
+ 10) echo Oct
+ ;;
+ 11) echo Nov
+ ;;
+ 12) echo Dec
+ ;;
+ *) echo unknown
+ ;;
+ esac
+}
+
+MY_P=${PN}-$((${PV:6:2}))$(convert_month ${PV:4:2})${PV:2:2}
DESCRIPTION="Large-scale Atomic/Molecular Massively Parallel Simulator"
HOMEPAGE="http://lammps.sandia.gov/"
^ permalink raw reply related [flat|nested] 34+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-physics/lammps/
@ 2013-06-27 0:01 Christoph Junghans
0 siblings, 0 replies; 34+ messages in thread
From: Christoph Junghans @ 2013-06-27 0:01 UTC (permalink / raw
To: gentoo-commits
commit: a6750bd491d834f5e066b606da0200411053ab99
Author: Christoph Junghans <ottxor <AT> gentoo <DOT> org>
AuthorDate: Wed Jun 26 23:53:01 2013 +0000
Commit: Christoph Junghans <ottxor <AT> gentoo <DOT> org>
CommitDate: Wed Jun 26 23:53:01 2013 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=a6750bd4
moved to gx86
---
sci-physics/lammps/ChangeLog | 65 ------------------
sci-physics/lammps/lammps-20130512.ebuild | 72 --------------------
sci-physics/lammps/lammps-20130514.ebuild | 75 ---------------------
sci-physics/lammps/lammps-20130526.ebuild | 105 ------------------------------
sci-physics/lammps/metadata.xml | 30 ---------
5 files changed, 347 deletions(-)
diff --git a/sci-physics/lammps/ChangeLog b/sci-physics/lammps/ChangeLog
deleted file mode 100644
index ac52ff6..0000000
--- a/sci-physics/lammps/ChangeLog
+++ /dev/null
@@ -1,65 +0,0 @@
-# ChangeLog for sci-physics/lammps
-# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
-# $Header: $
-
- 26 Jun 2013; Nicolas Bock <nicolasbock@gmail.com> lammps-20130526.ebuild:
- Bashified package name mangling. Thanks to ottxor for suggesting and helpful
- discussions.
-
- 26 Jun 2013; Nicolas Bock <nicolasbock@gmail.com> lammps-20130526.ebuild:
- Fixed missing use flag.
-
- 26 Jun 2013; Christoph Junghans <ottxor@gentoo.org> lammps-20130526.ebuild:
- clean up
-
- 28 May 2013; Nicolas Bock <nicolasbock@gmail.com> lammps-20130526.ebuild:
- Moved html documentation one folder up.
-
-*lammps-20130526 (28 May 2013)
-
- 28 May 2013; Nicolas Bock <nicolasbock@gmail.com> +lammps-20130526.ebuild:
- Version bump.
-
- 28 May 2013; Nicolas Bock <nicolasbock@gmail.com> lammps-20130514.ebuild:
- Added html documentation.
-
- 16 May 2013; Nicolas Bock <nicolasbock@gmail.com> lammps-20130514.ebuild:
- Fixed spelling in doc install.
-
-*lammps-20130514 (16 May 2013)
-
- 16 May 2013; Nicolas Bock <nicolasbock@gmail.com> +lammps-20130514.ebuild:
- Version bump to 14 May 2013.
-
- 15 May 2013; Nicolas Bock <nicolasbock@gmail.com> lammps-20130512.ebuild
- -files/Makefile.gentoo-serial.patch:
- Added mpi use flag. This ebuild builds either the serial version (without the
- mpi use flag), or the parallel version.
-
- 10 May 2013; Nicolas Bock <nicolasbock@gmail.com> lammps-20130512.ebuild:
- Moved a variable definition.
-
- 10 May 2013; Nicolas Bock <nicolasbock@gmail.com> lammps-20130512.ebuild,
- metadata.xml:
- Added more use flags to control the build process. It seems, at least on my
- system, that the LAMMPS_MEMALIGN option is a guarantee for a segfault. I made
- the use of this macro optional.
-
- 10 May 2013; Nicolas Bock <nicolasbock@gmail.com> lammps-20130512.ebuild:
- Cleaned up the make command line arguments.
-
- 10 May 2013; Nicolas Bock <nicolasbock@gmail.com> lammps-20130512.ebuild:
- The meam package doesn't like to be built in parallel.
-
- 10 May 2013; Nicolas Bock <nicolasbock@gmail.com> lammps-20130512.ebuild,
- metadata.xml:
- lammps: Added use flags for some optional packages.
-
- 10 May 2013; Nicolas Bock <nicolasbock@gmail.com> metadata.xml:
- Added maintainer (myself) to metadata.xml for lammps.
-
-*lammps-20130512 (10 May 2013)
-
- 10 May 2013; Nicolas Bock <nicolasbock@gmail.com>
- +files/Makefile.gentoo-serial.patch, +lammps-20130512.ebuild, +metadata.xml:
- Added first draft version of lammps. For now this is only the serial version.
diff --git a/sci-physics/lammps/lammps-20130512.ebuild b/sci-physics/lammps/lammps-20130512.ebuild
deleted file mode 100644
index dcb882e..0000000
--- a/sci-physics/lammps/lammps-20130512.ebuild
+++ /dev/null
@@ -1,72 +0,0 @@
-# Copyright 1999-2013 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: $
-
-EAPI=5
-
-FORTRAN_NEEDED="package-meam"
-
-inherit eutils fortran-2
-
-LAMMPSDATE="12May13"
-
-DESCRIPTION="Large-scale Atomic/Molecular Massively Parallel Simulator"
-HOMEPAGE="http://lammps.sandia.gov/"
-SRC_URI="http://lammps.sandia.gov/tars/lammps-${LAMMPSDATE}.tar.gz"
-
-LICENSE="GPL-2"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE="doc examples gzip lammps-memalign mpi package-dipole package-meam package-rigid"
-
-DEPEND="mpi? ( virtual/mpi )"
-RDEPEND="${DEPEND}"
-
-S="${WORKDIR}/${PN}-${LAMMPSDATE}"
-
-lmp_emake() {
- local LAMMPS_INCLUDEFLAGS=
- use gzip && LAMMPS_INCLUDEFLAGS+=" -DLAMMPS_GZIP"
- use lammps-memalign && LAMMPS_INCLUDEFLAGS+=" -DLAMMPS_MEMALIGN"
-
- # Note: The lammps makefile uses CC to indicate the C++ compiler.
- emake \
- ARCHIVE=$(tc-getAR) \
- CC=$(use mpi && echo mpic++ || echo $(tc-getCXX)) \
- F90=$(use mpi && echo mpif90 || echo $(tc-getFC)) \
- LINK=$(use mpi && echo mpic++ || echo $(tc-getCXX)) \
- CCFLAGS="${CXXFLAGS}" \
- F90FLAGS="${FCFLAGS}" \
- LINKFLAGS="${LDFLAGS}" \
- LMP_INC="${LAMMPS_INCLUDEFLAGS}" \
- MPI_INC=$(use mpi || echo -I../STUBS) \
- MPI_PATH=$(use mpi || echo -L../STUBS) \
- MPI_LIB=$(use mpi || echo -lmpi_stubs) \
- "$@"
-}
-
-src_compile() {
- # Compile stubs for serial version.
- use mpi || lmp_emake -C src stubs
-
- # Build optional packages.
- if use package-meam; then
- lmp_emake -C src yes-meam
- lmp_emake -j1 -C lib/meam -f Makefile.gfortran
- fi
- use package-dipole && emake -C src yes-dipole
- use package-rigid && emake -C src yes-rigid
-
- # Compile.
- lmp_emake -C src serial
-}
-
-src_install() {
- newbin "$S/src/lmp_serial" "lmp"
- if use examples; then
- insinto "/usr/share/doc/${PF}"
- doins -r examples
- fi
- dodoc README
- use doc && dohtml -r docs/*.html
-}
diff --git a/sci-physics/lammps/lammps-20130514.ebuild b/sci-physics/lammps/lammps-20130514.ebuild
deleted file mode 100644
index 61c2e12..0000000
--- a/sci-physics/lammps/lammps-20130514.ebuild
+++ /dev/null
@@ -1,75 +0,0 @@
-# Copyright 1999-2013 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: $
-
-EAPI=5
-
-FORTRAN_NEEDED="package-meam"
-
-inherit eutils fortran-2
-
-LAMMPSDATE="14May13"
-
-DESCRIPTION="Large-scale Atomic/Molecular Massively Parallel Simulator"
-HOMEPAGE="http://lammps.sandia.gov/"
-SRC_URI="http://lammps.sandia.gov/tars/lammps-${LAMMPSDATE}.tar.gz"
-
-LICENSE="GPL-2"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE="doc examples gzip lammps-memalign mpi package-dipole package-meam package-rigid"
-
-DEPEND="mpi? ( virtual/mpi )"
-RDEPEND="${DEPEND}"
-
-S="${WORKDIR}/${PN}-${LAMMPSDATE}"
-
-lmp_emake() {
- local LAMMPS_INCLUDEFLAGS=
- use gzip && LAMMPS_INCLUDEFLAGS+=" -DLAMMPS_GZIP"
- use lammps-memalign && LAMMPS_INCLUDEFLAGS+=" -DLAMMPS_MEMALIGN"
-
- # Note: The lammps makefile uses CC to indicate the C++ compiler.
- emake \
- ARCHIVE=$(tc-getAR) \
- CC=$(use mpi && echo mpic++ || echo $(tc-getCXX)) \
- F90=$(use mpi && echo mpif90 || echo $(tc-getFC)) \
- LINK=$(use mpi && echo mpic++ || echo $(tc-getCXX)) \
- CCFLAGS="${CXXFLAGS}" \
- F90FLAGS="${FCFLAGS}" \
- LINKFLAGS="${LDFLAGS}" \
- LMP_INC="${LAMMPS_INCLUDEFLAGS}" \
- MPI_INC=$(use mpi || echo -I../STUBS) \
- MPI_PATH=$(use mpi || echo -L../STUBS) \
- MPI_LIB=$(use mpi || echo -lmpi_stubs) \
- "$@"
-}
-
-src_compile() {
- # Compile stubs for serial version.
- use mpi || lmp_emake -C src stubs
-
- # Build optional packages.
- if use package-meam; then
- lmp_emake -C src yes-meam
- lmp_emake -j1 -C lib/meam -f Makefile.gfortran
- fi
- use package-dipole && emake -C src yes-dipole
- use package-rigid && emake -C src yes-rigid
-
- # Compile.
- lmp_emake -C src serial
-}
-
-src_install() {
- newbin "src/lmp_serial" "lmp"
- if use examples; then
- insinto "/usr/share/doc/${PF}"
- doins -r examples
- fi
- dodoc README
- if use doc; then
- dodoc doc/Manual.pdf
- dohtml -r doc
- fi
-}
diff --git a/sci-physics/lammps/lammps-20130526.ebuild b/sci-physics/lammps/lammps-20130526.ebuild
deleted file mode 100644
index cfc247b..0000000
--- a/sci-physics/lammps/lammps-20130526.ebuild
+++ /dev/null
@@ -1,105 +0,0 @@
-# Copyright 1999-2013 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: $
-
-EAPI=5
-
-FORTRAN_NEEDED="package-meam"
-
-inherit eutils fortran-2
-
-convert_month() {
- case $1 in
- 01) echo Jan
- ;;
- 02) echo Feb
- ;;
- 03) echo Mar
- ;;
- 04) echo Apr
- ;;
- 05) echo May
- ;;
- 06) echo Jun
- ;;
- 07) echo Jul
- ;;
- 08) echo Aug
- ;;
- 09) echo Sep
- ;;
- 10) echo Oct
- ;;
- 11) echo Nov
- ;;
- 12) echo Dec
- ;;
- *) echo unknown
- ;;
- esac
-}
-
-MY_P=${PN}-$((${PV:6:2}))$(convert_month ${PV:4:2})${PV:2:2}
-
-DESCRIPTION="Large-scale Atomic/Molecular Massively Parallel Simulator"
-HOMEPAGE="http://lammps.sandia.gov/"
-SRC_URI="http://lammps.sandia.gov/tars/${MY_P}.tar.gz"
-
-LICENSE="GPL-2"
-SLOT="0"
-KEYWORDS="~amd64"
-IUSE="doc examples gzip lammps-memalign mpi package-dipole package-meam package-rigid"
-
-DEPEND="mpi? ( virtual/mpi )"
-RDEPEND="${DEPEND}"
-
-S="${WORKDIR}/${MY_P}"
-
-lmp_emake() {
- local LAMMPS_INCLUDEFLAGS="$(usex gzip '-DLAMMPS_GZIP' '')"
- LAMMPS_INCLUDEFLAGS+="$(usex lammps-memalign ' -DLAMMPS_MEMALIGN' '')"
-
- # Note: The lammps makefile uses CC to indicate the C++ compiler.
- emake \
- ARCHIVE=$(tc-getAR) \
- CC=$(usex mpi "mpic++" "$(tc-getCXX)") \
- F90=$(usex mpi "mpif90" "$(tc-getFC)") \
- LINK=$(usex mpi "mpic++" "$(tc-getCXX)") \
- CCFLAGS="${CXXFLAGS}" \
- F90FLAGS="${FCFLAGS}" \
- LINKFLAGS="${LDFLAGS}" \
- LMP_INC="${LAMMPS_INCLUDEFLAGS}" \
- MPI_INC=$(usex mpi '' "-I../STUBS") \
- MPI_PATH=$(usex mpi '' '-L../STUBS') \
- MPI_LIB=$(usex mpi '' '-lmpi_stubs') \
- "$@"
-}
-
-src_compile() {
- # Compile stubs for serial version.
- use mpi || lmp_emake -C src stubs
-
- # Build optional packages.
- if use package-meam; then
- lmp_emake -C src yes-meam
- lmp_emake -j1 -C lib/meam -f Makefile.gfortran
- fi
- use package-dipole && emake -C src yes-dipole
- use package-rigid && emake -C src yes-rigid
-
- # Compile.
- lmp_emake -C src serial
-}
-
-src_install() {
- newbin "src/lmp_serial" "lmp"
- if use examples; then
- insinto "/usr/share/doc/${PF}"
- doins -r examples
- fi
- dodoc README
- if use doc; then
- dodoc doc/Manual.pdf
- dohtml -r doc/*
- fi
-}
diff --git a/sci-physics/lammps/metadata.xml b/sci-physics/lammps/metadata.xml
deleted file mode 100644
index b5e2ddd..0000000
--- a/sci-physics/lammps/metadata.xml
+++ /dev/null
@@ -1,30 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
- <longdescription lang="en">
- LAMMPS is a classical molecular dynamics code, and an acronym for
- Large-scale Atomic/Molecular Massively Parallel Simulator.
-
- LAMMPS has potentials for soft materials (biomolecules, polymers) and
- solid-state materials (metals, semiconductors) and coarse-grained or
- mesoscopic systems. It can be used to model atoms or, more generically,
- as a parallel particle simulator at the atomic, meso, or continuum
- scale.
-
- LAMMPS runs on single processors or in parallel using message-passing
- techniques and a spatial-decomposition of the simulation domain. The
- code is designed to be easy to modify or extend with new functionality.
- </longdescription>
- <use>
- <flag name="lammps-memalign">Enables the use of the posix_memalign()
- call instead of malloc() when large chunks or memory are allocated
- by LAMMPS</flag>
- <flag name="package-meam">modified EAM potential</flag>
- <flag name="package-dipole">point dipole particles</flag>
- <flag name="package-rigid">rigid bodies</flag>
- </use>
- <maintainer>
- <email>nicolasbock@gmail.com</email>
- </maintainer>
-</pkgmetadata>
-
^ permalink raw reply related [flat|nested] 34+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-physics/lammps/
@ 2013-07-03 16:41 Nicolas Bock
0 siblings, 0 replies; 34+ messages in thread
From: Nicolas Bock @ 2013-07-03 16:41 UTC (permalink / raw
To: gentoo-commits
commit: 9c9f63650c60fe29306477afb94ac5b66b808e90
Author: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
AuthorDate: Wed Jul 3 15:25:50 2013 +0000
Commit: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
CommitDate: Wed Jul 3 15:25:50 2013 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=9c9f6365
Version bump to 1-Jul-2013.
Package-Manager: portage-2.2.0_alpha186
---
sci-physics/lammps/ChangeLog | 9 +++
sci-physics/lammps/lammps-20130701.ebuild | 105 ++++++++++++++++++++++++++++++
sci-physics/lammps/metadata.xml | 31 +++++++++
3 files changed, 145 insertions(+)
diff --git a/sci-physics/lammps/ChangeLog b/sci-physics/lammps/ChangeLog
new file mode 100644
index 0000000..2f4ea9e
--- /dev/null
+++ b/sci-physics/lammps/ChangeLog
@@ -0,0 +1,9 @@
+# ChangeLog for sci-physics/lammps
+# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
+# $Header: $
+
+*lammps-20130701 (03 Jul 2013)
+
+ 03 Jul 2013; Nicolas Bock <nicolasbock@gmail.com> +lammps-20130701.ebuild,
+ +metadata.xml:
+ Version bump to 1-Jul-2013.
diff --git a/sci-physics/lammps/lammps-20130701.ebuild b/sci-physics/lammps/lammps-20130701.ebuild
new file mode 100644
index 0000000..4793d83
--- /dev/null
+++ b/sci-physics/lammps/lammps-20130701.ebuild
@@ -0,0 +1,105 @@
+# Copyright 1999-2013 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-physics/lammps/lammps-20130526.ebuild,v 1.1 2013/06/26 23:53:11 ottxor Exp $
+
+EAPI=5
+
+FORTRAN_NEEDED="package-meam"
+
+inherit eutils fortran-2
+
+convert_month() {
+ case $1 in
+ 01) echo Jan
+ ;;
+ 02) echo Feb
+ ;;
+ 03) echo Mar
+ ;;
+ 04) echo Apr
+ ;;
+ 05) echo May
+ ;;
+ 06) echo Jun
+ ;;
+ 07) echo Jul
+ ;;
+ 08) echo Aug
+ ;;
+ 09) echo Sep
+ ;;
+ 10) echo Oct
+ ;;
+ 11) echo Nov
+ ;;
+ 12) echo Dec
+ ;;
+ *) echo unknown
+ ;;
+ esac
+}
+
+MY_P=${PN}-$((${PV:6:2}))$(convert_month ${PV:4:2})${PV:2:2}
+
+DESCRIPTION="Large-scale Atomic/Molecular Massively Parallel Simulator"
+HOMEPAGE="http://lammps.sandia.gov/"
+SRC_URI="http://lammps.sandia.gov/tars/${MY_P}.tar.gz"
+
+LICENSE="GPL-2"
+SLOT="0"
+KEYWORDS="~amd64"
+IUSE="doc examples gzip lammps-memalign mpi package-dipole package-meam package-rigid"
+
+DEPEND="mpi? ( virtual/mpi )"
+RDEPEND="${DEPEND}"
+
+S="${WORKDIR}/${MY_P}"
+
+lmp_emake() {
+ local LAMMPS_INCLUDEFLAGS="$(usex gzip '-DLAMMPS_GZIP' '')"
+ LAMMPS_INCLUDEFLAGS+="$(usex lammps-memalign ' -DLAMMPS_MEMALIGN' '')"
+
+ # Note: The lammps makefile uses CC to indicate the C++ compiler.
+ emake \
+ ARCHIVE=$(tc-getAR) \
+ CC=$(usex mpi "mpic++" "$(tc-getCXX)") \
+ F90=$(usex mpi "mpif90" "$(tc-getFC)") \
+ LINK=$(usex mpi "mpic++" "$(tc-getCXX)") \
+ CCFLAGS="${CXXFLAGS}" \
+ F90FLAGS="${FCFLAGS}" \
+ LINKFLAGS="${LDFLAGS}" \
+ LMP_INC="${LAMMPS_INCLUDEFLAGS}" \
+ MPI_INC=$(usex mpi '' "-I../STUBS") \
+ MPI_PATH=$(usex mpi '' '-L../STUBS') \
+ MPI_LIB=$(usex mpi '' '-lmpi_stubs') \
+ "$@"
+}
+
+src_compile() {
+ # Compile stubs for serial version.
+ use mpi || lmp_emake -C src stubs
+
+ # Build optional packages.
+ if use package-meam; then
+ lmp_emake -C src yes-meam
+ lmp_emake -j1 -C lib/meam -f Makefile.gfortran
+ fi
+ use package-dipole && emake -C src yes-dipole
+ use package-rigid && emake -C src yes-rigid
+
+ # Compile.
+ lmp_emake -C src serial
+}
+
+src_install() {
+ newbin "src/lmp_serial" "lmp"
+ if use examples; then
+ insinto "/usr/share/doc/${PF}"
+ doins -r examples
+ fi
+ dodoc README
+ if use doc; then
+ dodoc doc/Manual.pdf
+ dohtml -r doc/*
+ fi
+}
diff --git a/sci-physics/lammps/metadata.xml b/sci-physics/lammps/metadata.xml
new file mode 100644
index 0000000..1acfbc7
--- /dev/null
+++ b/sci-physics/lammps/metadata.xml
@@ -0,0 +1,31 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+ <longdescription lang="en">
+ LAMMPS is a classical molecular dynamics code, and an acronym for
+ Large-scale Atomic/Molecular Massively Parallel Simulator.
+
+ LAMMPS has potentials for soft materials (biomolecules, polymers) and
+ solid-state materials (metals, semiconductors) and coarse-grained or
+ mesoscopic systems. It can be used to model atoms or, more generically,
+ as a parallel particle simulator at the atomic, meso, or continuum
+ scale.
+
+ LAMMPS runs on single processors or in parallel using message-passing
+ techniques and a spatial-decomposition of the simulation domain. The
+ code is designed to be easy to modify or extend with new functionality.
+ </longdescription>
+ <use>
+ <flag name="lammps-memalign">Enables the use of the posix_memalign()
+ call instead of malloc() when large chunks or memory are allocated
+ by LAMMPS</flag>
+ <flag name="package-meam">modified EAM potential</flag>
+ <flag name="package-dipole">point dipole particles</flag>
+ <flag name="package-rigid">rigid bodies</flag>
+ </use>
+ <herd>sci-physics</herd>
+ <maintainer>
+ <email>nicolasbock@gmail.com</email>
+ </maintainer>
+</pkgmetadata>
+
^ permalink raw reply related [flat|nested] 34+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-physics/lammps/
@ 2013-07-09 20:55 Nicolas Bock
0 siblings, 0 replies; 34+ messages in thread
From: Nicolas Bock @ 2013-07-09 20:55 UTC (permalink / raw
To: gentoo-commits
commit: ab7389777b4e30ec86e051225ee8dcb0ab7f550c
Author: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
AuthorDate: Tue Jul 9 20:53:56 2013 +0000
Commit: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
CommitDate: Tue Jul 9 20:53:56 2013 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=ab738977
Added current version: sci-physics/lammps-20130708.
* Fixed bug in lammps to gentoo version string conversion. In bash arithmetic
operations, a string literal with a leading "0" is interpreted in base 8.
* Added potentials, which were not installed in previous versions.
* Moved examples from /usr/share/doc/${PF} to /usr/share/lammps-${PF}.
Package-Manager: portage-2.2.0_alpha187
---
sci-physics/lammps/ChangeLog | 9 +++
sci-physics/lammps/lammps-20130708.ebuild | 115 ++++++++++++++++++++++++++++++
2 files changed, 124 insertions(+)
diff --git a/sci-physics/lammps/ChangeLog b/sci-physics/lammps/ChangeLog
index 2f4ea9e..66e3d00 100644
--- a/sci-physics/lammps/ChangeLog
+++ b/sci-physics/lammps/ChangeLog
@@ -2,6 +2,15 @@
# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+*lammps-20130708 (09 Jul 2013)
+
+ 09 Jul 2013; Nicolas Bock <nicolasbock@gmail.com> +lammps-20130708.ebuild:
+ Added current version: sci-physics/lammps-20130708. * Fixed bug in lammps to
+ gentoo version string conversion. In bash arithmetic operations, a string
+ literal with a leading "0" is interpreted in base 8. * Added potentials, which
+ were not installed in previous versions. * Moved examples from
+ /usr/share/doc/${PF} to /usr/share/lammps-${PF}.
+
*lammps-20130701 (03 Jul 2013)
03 Jul 2013; Nicolas Bock <nicolasbock@gmail.com> +lammps-20130701.ebuild,
diff --git a/sci-physics/lammps/lammps-20130708.ebuild b/sci-physics/lammps/lammps-20130708.ebuild
new file mode 100644
index 0000000..6a4a817
--- /dev/null
+++ b/sci-physics/lammps/lammps-20130708.ebuild
@@ -0,0 +1,115 @@
+# Copyright 1999-2013 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-physics/lammps/lammps-20130526.ebuild,v 1.1 2013/06/26 23:53:11 ottxor Exp $
+
+EAPI=5
+
+FORTRAN_NEEDED="package-meam"
+
+inherit eutils fortran-2
+
+convert_month() {
+ case $1 in
+ 01) echo Jan
+ ;;
+ 02) echo Feb
+ ;;
+ 03) echo Mar
+ ;;
+ 04) echo Apr
+ ;;
+ 05) echo May
+ ;;
+ 06) echo Jun
+ ;;
+ 07) echo Jul
+ ;;
+ 08) echo Aug
+ ;;
+ 09) echo Sep
+ ;;
+ 10) echo Oct
+ ;;
+ 11) echo Nov
+ ;;
+ 12) echo Dec
+ ;;
+ *) echo unknown
+ ;;
+ esac
+}
+
+MY_P=${PN}-$((10#${PV:6:2}))$(convert_month ${PV:4:2})${PV:2:2}
+
+DESCRIPTION="Large-scale Atomic/Molecular Massively Parallel Simulator"
+HOMEPAGE="http://lammps.sandia.gov/"
+SRC_URI="http://lammps.sandia.gov/tars/${MY_P}.tar.gz"
+
+LICENSE="GPL-2"
+SLOT="0"
+KEYWORDS="~amd64"
+IUSE="doc examples gzip lammps-memalign mpi package-dipole package-meam package-rigid"
+
+DEPEND="mpi? ( virtual/mpi )"
+RDEPEND="${DEPEND}"
+
+S="${WORKDIR}/${MY_P}"
+
+lmp_emake() {
+ local LAMMPS_INCLUDEFLAGS="$(usex gzip '-DLAMMPS_GZIP' '')"
+ LAMMPS_INCLUDEFLAGS+="$(usex lammps-memalign ' -DLAMMPS_MEMALIGN' '')"
+
+ # Note: The lammps makefile uses CC to indicate the C++ compiler.
+ emake \
+ ARCHIVE=$(tc-getAR) \
+ CC=$(usex mpi "mpic++" "$(tc-getCXX)") \
+ F90=$(usex mpi "mpif90" "$(tc-getFC)") \
+ LINK=$(usex mpi "mpic++" "$(tc-getCXX)") \
+ CCFLAGS="${CXXFLAGS}" \
+ F90FLAGS="${FCFLAGS}" \
+ LINKFLAGS="${LDFLAGS}" \
+ LMP_INC="${LAMMPS_INCLUDEFLAGS}" \
+ MPI_INC=$(usex mpi '' "-I../STUBS") \
+ MPI_PATH=$(usex mpi '' '-L../STUBS') \
+ MPI_LIB=$(usex mpi '' '-lmpi_stubs') \
+ "$@"
+}
+
+src_compile() {
+ # Compile stubs for serial version.
+ use mpi || lmp_emake -C src stubs
+
+ # Build optional packages.
+ if use package-meam; then
+ lmp_emake -C src yes-meam
+ lmp_emake -j1 -C lib/meam -f Makefile.gfortran
+ fi
+ use package-dipole && emake -C src yes-dipole
+ use package-rigid && emake -C src yes-rigid
+
+ # Compile.
+ lmp_emake -C src serial
+}
+
+src_install() {
+ newbin "src/lmp_serial" "lmp"
+
+ local LAMMPS_POTENTIALS="/usr/share/${PF}/potentials"
+ insinto "${LAMMPS_POTENTIALS}"
+ doins potentials/*
+ echo "LAMMPS_POTENTIALS=${LAMMPS_POTENTIALS}" > 99lammps
+ doenvd 99lammps
+
+ if use examples; then
+ local LAMMPS_EXAMPLES="/usr/share/${PF}/examples"
+ elog "The examples can be found in ${LAMMPS_EXAMPLES}"
+ insinto "${LAMMPS_EXAMPLES}"
+ doins -r examples/*
+ fi
+
+ dodoc README
+ if use doc; then
+ dodoc doc/Manual.pdf
+ dohtml -r doc/*
+ fi
+}
^ permalink raw reply related [flat|nested] 34+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-physics/lammps/
@ 2013-07-09 20:55 Nicolas Bock
0 siblings, 0 replies; 34+ messages in thread
From: Nicolas Bock @ 2013-07-09 20:55 UTC (permalink / raw
To: gentoo-commits
commit: cb5c01fb6cf42293bb625c452c935047a7add49f
Author: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
AuthorDate: Tue Jul 9 20:55:24 2013 +0000
Commit: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
CommitDate: Tue Jul 9 20:55:24 2013 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=cb5c01fb
sci-physics/lammps: Fixed repoman warning.
Package-Manager: portage-2.2.0_alpha187
---
sci-physics/lammps/ChangeLog | 3 +++
sci-physics/lammps/lammps-20130708.ebuild | 2 +-
2 files changed, 4 insertions(+), 1 deletion(-)
diff --git a/sci-physics/lammps/ChangeLog b/sci-physics/lammps/ChangeLog
index 66e3d00..3671fad 100644
--- a/sci-physics/lammps/ChangeLog
+++ b/sci-physics/lammps/ChangeLog
@@ -2,6 +2,9 @@
# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+ 09 Jul 2013; Nicolas Bock <nicolasbock@gmail.com> lammps-20130708.ebuild:
+ sci-physics/lammps: Fixed repoman warning.
+
*lammps-20130708 (09 Jul 2013)
09 Jul 2013; Nicolas Bock <nicolasbock@gmail.com> +lammps-20130708.ebuild:
diff --git a/sci-physics/lammps/lammps-20130708.ebuild b/sci-physics/lammps/lammps-20130708.ebuild
index 6a4a817..fa960e3 100644
--- a/sci-physics/lammps/lammps-20130708.ebuild
+++ b/sci-physics/lammps/lammps-20130708.ebuild
@@ -97,7 +97,7 @@ src_install() {
local LAMMPS_POTENTIALS="/usr/share/${PF}/potentials"
insinto "${LAMMPS_POTENTIALS}"
doins potentials/*
- echo "LAMMPS_POTENTIALS=${LAMMPS_POTENTIALS}" > 99lammps
+ echo "LAMMPS_POTENTIALS=${LAMMPS_POTENTIALS}" > 99lammps
doenvd 99lammps
if use examples; then
^ permalink raw reply related [flat|nested] 34+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-physics/lammps/
@ 2013-07-16 21:04 Nicolas Bock
0 siblings, 0 replies; 34+ messages in thread
From: Nicolas Bock @ 2013-07-16 21:04 UTC (permalink / raw
To: gentoo-commits
commit: 3bdd3582331709363c9323b99ce68b12d51c9ef3
Author: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
AuthorDate: Tue Jul 16 21:01:46 2013 +0000
Commit: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
CommitDate: Tue Jul 16 21:01:46 2013 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=3bdd3582
Version bump to sci-physics/lammps-20130711
Package-Manager: portage-2.2.0_alpha188
---
sci-physics/lammps/ChangeLog | 5 ++
sci-physics/lammps/lammps-20130711.ebuild | 115 ++++++++++++++++++++++++++++++
2 files changed, 120 insertions(+)
diff --git a/sci-physics/lammps/ChangeLog b/sci-physics/lammps/ChangeLog
index 3671fad..c183be1 100644
--- a/sci-physics/lammps/ChangeLog
+++ b/sci-physics/lammps/ChangeLog
@@ -2,6 +2,11 @@
# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+*lammps-20130711 (16 Jul 2013)
+
+ 16 Jul 2013; Nicolas Bock <nicolasbock@gmail.com> +lammps-20130711.ebuild:
+ Version bump to sci-physics/lammps-20130711
+
09 Jul 2013; Nicolas Bock <nicolasbock@gmail.com> lammps-20130708.ebuild:
sci-physics/lammps: Fixed repoman warning.
diff --git a/sci-physics/lammps/lammps-20130711.ebuild b/sci-physics/lammps/lammps-20130711.ebuild
new file mode 100644
index 0000000..fa960e3
--- /dev/null
+++ b/sci-physics/lammps/lammps-20130711.ebuild
@@ -0,0 +1,115 @@
+# Copyright 1999-2013 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-physics/lammps/lammps-20130526.ebuild,v 1.1 2013/06/26 23:53:11 ottxor Exp $
+
+EAPI=5
+
+FORTRAN_NEEDED="package-meam"
+
+inherit eutils fortran-2
+
+convert_month() {
+ case $1 in
+ 01) echo Jan
+ ;;
+ 02) echo Feb
+ ;;
+ 03) echo Mar
+ ;;
+ 04) echo Apr
+ ;;
+ 05) echo May
+ ;;
+ 06) echo Jun
+ ;;
+ 07) echo Jul
+ ;;
+ 08) echo Aug
+ ;;
+ 09) echo Sep
+ ;;
+ 10) echo Oct
+ ;;
+ 11) echo Nov
+ ;;
+ 12) echo Dec
+ ;;
+ *) echo unknown
+ ;;
+ esac
+}
+
+MY_P=${PN}-$((10#${PV:6:2}))$(convert_month ${PV:4:2})${PV:2:2}
+
+DESCRIPTION="Large-scale Atomic/Molecular Massively Parallel Simulator"
+HOMEPAGE="http://lammps.sandia.gov/"
+SRC_URI="http://lammps.sandia.gov/tars/${MY_P}.tar.gz"
+
+LICENSE="GPL-2"
+SLOT="0"
+KEYWORDS="~amd64"
+IUSE="doc examples gzip lammps-memalign mpi package-dipole package-meam package-rigid"
+
+DEPEND="mpi? ( virtual/mpi )"
+RDEPEND="${DEPEND}"
+
+S="${WORKDIR}/${MY_P}"
+
+lmp_emake() {
+ local LAMMPS_INCLUDEFLAGS="$(usex gzip '-DLAMMPS_GZIP' '')"
+ LAMMPS_INCLUDEFLAGS+="$(usex lammps-memalign ' -DLAMMPS_MEMALIGN' '')"
+
+ # Note: The lammps makefile uses CC to indicate the C++ compiler.
+ emake \
+ ARCHIVE=$(tc-getAR) \
+ CC=$(usex mpi "mpic++" "$(tc-getCXX)") \
+ F90=$(usex mpi "mpif90" "$(tc-getFC)") \
+ LINK=$(usex mpi "mpic++" "$(tc-getCXX)") \
+ CCFLAGS="${CXXFLAGS}" \
+ F90FLAGS="${FCFLAGS}" \
+ LINKFLAGS="${LDFLAGS}" \
+ LMP_INC="${LAMMPS_INCLUDEFLAGS}" \
+ MPI_INC=$(usex mpi '' "-I../STUBS") \
+ MPI_PATH=$(usex mpi '' '-L../STUBS') \
+ MPI_LIB=$(usex mpi '' '-lmpi_stubs') \
+ "$@"
+}
+
+src_compile() {
+ # Compile stubs for serial version.
+ use mpi || lmp_emake -C src stubs
+
+ # Build optional packages.
+ if use package-meam; then
+ lmp_emake -C src yes-meam
+ lmp_emake -j1 -C lib/meam -f Makefile.gfortran
+ fi
+ use package-dipole && emake -C src yes-dipole
+ use package-rigid && emake -C src yes-rigid
+
+ # Compile.
+ lmp_emake -C src serial
+}
+
+src_install() {
+ newbin "src/lmp_serial" "lmp"
+
+ local LAMMPS_POTENTIALS="/usr/share/${PF}/potentials"
+ insinto "${LAMMPS_POTENTIALS}"
+ doins potentials/*
+ echo "LAMMPS_POTENTIALS=${LAMMPS_POTENTIALS}" > 99lammps
+ doenvd 99lammps
+
+ if use examples; then
+ local LAMMPS_EXAMPLES="/usr/share/${PF}/examples"
+ elog "The examples can be found in ${LAMMPS_EXAMPLES}"
+ insinto "${LAMMPS_EXAMPLES}"
+ doins -r examples/*
+ fi
+
+ dodoc README
+ if use doc; then
+ dodoc doc/Manual.pdf
+ dohtml -r doc/*
+ fi
+}
^ permalink raw reply related [flat|nested] 34+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-physics/lammps/
@ 2013-08-13 22:20 Nicolas Bock
0 siblings, 0 replies; 34+ messages in thread
From: Nicolas Bock @ 2013-08-13 22:20 UTC (permalink / raw
To: gentoo-commits
commit: cbc23532432da103863939787f96f60de570c664
Author: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
AuthorDate: Tue Aug 13 22:15:51 2013 +0000
Commit: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
CommitDate: Tue Aug 13 22:15:51 2013 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=cbc23532
sci-physics/lammps-20130816: Version bump.
Package-Manager: portage-2.2.0_alpha195
---
sci-physics/lammps/ChangeLog | 5 ++
sci-physics/lammps/lammps-20130816.ebuild | 115 ++++++++++++++++++++++++++++++
2 files changed, 120 insertions(+)
diff --git a/sci-physics/lammps/ChangeLog b/sci-physics/lammps/ChangeLog
index c183be1..5bc3b87 100644
--- a/sci-physics/lammps/ChangeLog
+++ b/sci-physics/lammps/ChangeLog
@@ -2,6 +2,11 @@
# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+*lammps-20130816 (13 Aug 2013)
+
+ 13 Aug 2013; Nicolas Bock <nicolasbock@gmail.com> +lammps-20130816.ebuild:
+ sci-physics/lammps-20130816: Version bump.
+
*lammps-20130711 (16 Jul 2013)
16 Jul 2013; Nicolas Bock <nicolasbock@gmail.com> +lammps-20130711.ebuild:
diff --git a/sci-physics/lammps/lammps-20130816.ebuild b/sci-physics/lammps/lammps-20130816.ebuild
new file mode 100644
index 0000000..fa960e3
--- /dev/null
+++ b/sci-physics/lammps/lammps-20130816.ebuild
@@ -0,0 +1,115 @@
+# Copyright 1999-2013 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-physics/lammps/lammps-20130526.ebuild,v 1.1 2013/06/26 23:53:11 ottxor Exp $
+
+EAPI=5
+
+FORTRAN_NEEDED="package-meam"
+
+inherit eutils fortran-2
+
+convert_month() {
+ case $1 in
+ 01) echo Jan
+ ;;
+ 02) echo Feb
+ ;;
+ 03) echo Mar
+ ;;
+ 04) echo Apr
+ ;;
+ 05) echo May
+ ;;
+ 06) echo Jun
+ ;;
+ 07) echo Jul
+ ;;
+ 08) echo Aug
+ ;;
+ 09) echo Sep
+ ;;
+ 10) echo Oct
+ ;;
+ 11) echo Nov
+ ;;
+ 12) echo Dec
+ ;;
+ *) echo unknown
+ ;;
+ esac
+}
+
+MY_P=${PN}-$((10#${PV:6:2}))$(convert_month ${PV:4:2})${PV:2:2}
+
+DESCRIPTION="Large-scale Atomic/Molecular Massively Parallel Simulator"
+HOMEPAGE="http://lammps.sandia.gov/"
+SRC_URI="http://lammps.sandia.gov/tars/${MY_P}.tar.gz"
+
+LICENSE="GPL-2"
+SLOT="0"
+KEYWORDS="~amd64"
+IUSE="doc examples gzip lammps-memalign mpi package-dipole package-meam package-rigid"
+
+DEPEND="mpi? ( virtual/mpi )"
+RDEPEND="${DEPEND}"
+
+S="${WORKDIR}/${MY_P}"
+
+lmp_emake() {
+ local LAMMPS_INCLUDEFLAGS="$(usex gzip '-DLAMMPS_GZIP' '')"
+ LAMMPS_INCLUDEFLAGS+="$(usex lammps-memalign ' -DLAMMPS_MEMALIGN' '')"
+
+ # Note: The lammps makefile uses CC to indicate the C++ compiler.
+ emake \
+ ARCHIVE=$(tc-getAR) \
+ CC=$(usex mpi "mpic++" "$(tc-getCXX)") \
+ F90=$(usex mpi "mpif90" "$(tc-getFC)") \
+ LINK=$(usex mpi "mpic++" "$(tc-getCXX)") \
+ CCFLAGS="${CXXFLAGS}" \
+ F90FLAGS="${FCFLAGS}" \
+ LINKFLAGS="${LDFLAGS}" \
+ LMP_INC="${LAMMPS_INCLUDEFLAGS}" \
+ MPI_INC=$(usex mpi '' "-I../STUBS") \
+ MPI_PATH=$(usex mpi '' '-L../STUBS') \
+ MPI_LIB=$(usex mpi '' '-lmpi_stubs') \
+ "$@"
+}
+
+src_compile() {
+ # Compile stubs for serial version.
+ use mpi || lmp_emake -C src stubs
+
+ # Build optional packages.
+ if use package-meam; then
+ lmp_emake -C src yes-meam
+ lmp_emake -j1 -C lib/meam -f Makefile.gfortran
+ fi
+ use package-dipole && emake -C src yes-dipole
+ use package-rigid && emake -C src yes-rigid
+
+ # Compile.
+ lmp_emake -C src serial
+}
+
+src_install() {
+ newbin "src/lmp_serial" "lmp"
+
+ local LAMMPS_POTENTIALS="/usr/share/${PF}/potentials"
+ insinto "${LAMMPS_POTENTIALS}"
+ doins potentials/*
+ echo "LAMMPS_POTENTIALS=${LAMMPS_POTENTIALS}" > 99lammps
+ doenvd 99lammps
+
+ if use examples; then
+ local LAMMPS_EXAMPLES="/usr/share/${PF}/examples"
+ elog "The examples can be found in ${LAMMPS_EXAMPLES}"
+ insinto "${LAMMPS_EXAMPLES}"
+ doins -r examples/*
+ fi
+
+ dodoc README
+ if use doc; then
+ dodoc doc/Manual.pdf
+ dohtml -r doc/*
+ fi
+}
^ permalink raw reply related [flat|nested] 34+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-physics/lammps/
@ 2013-09-02 18:17 Nicolas Bock
0 siblings, 0 replies; 34+ messages in thread
From: Nicolas Bock @ 2013-09-02 18:17 UTC (permalink / raw
To: gentoo-commits
commit: bd3e90fb72008fc08a57e25d8533543a35046459
Author: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
AuthorDate: Mon Sep 2 18:14:58 2013 +0000
Commit: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
CommitDate: Mon Sep 2 18:14:58 2013 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=bd3e90fb
sci-physics/lammps: Version bump to 20130830.
Package-Manager: portage-2.2.1
---
sci-physics/lammps/ChangeLog | 5 ++
sci-physics/lammps/lammps-20130830.ebuild | 115 ++++++++++++++++++++++++++++++
2 files changed, 120 insertions(+)
diff --git a/sci-physics/lammps/ChangeLog b/sci-physics/lammps/ChangeLog
index 5bc3b87..b53b891 100644
--- a/sci-physics/lammps/ChangeLog
+++ b/sci-physics/lammps/ChangeLog
@@ -2,6 +2,11 @@
# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+*lammps-20130830 (02 Sep 2013)
+
+ 02 Sep 2013; Nicolas Bock <nicolasbock@gmail.com> +lammps-20130830.ebuild:
+ sci-physics/lammps: Version bump to 20130830.
+
*lammps-20130816 (13 Aug 2013)
13 Aug 2013; Nicolas Bock <nicolasbock@gmail.com> +lammps-20130816.ebuild:
diff --git a/sci-physics/lammps/lammps-20130830.ebuild b/sci-physics/lammps/lammps-20130830.ebuild
new file mode 100644
index 0000000..fa960e3
--- /dev/null
+++ b/sci-physics/lammps/lammps-20130830.ebuild
@@ -0,0 +1,115 @@
+# Copyright 1999-2013 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-physics/lammps/lammps-20130526.ebuild,v 1.1 2013/06/26 23:53:11 ottxor Exp $
+
+EAPI=5
+
+FORTRAN_NEEDED="package-meam"
+
+inherit eutils fortran-2
+
+convert_month() {
+ case $1 in
+ 01) echo Jan
+ ;;
+ 02) echo Feb
+ ;;
+ 03) echo Mar
+ ;;
+ 04) echo Apr
+ ;;
+ 05) echo May
+ ;;
+ 06) echo Jun
+ ;;
+ 07) echo Jul
+ ;;
+ 08) echo Aug
+ ;;
+ 09) echo Sep
+ ;;
+ 10) echo Oct
+ ;;
+ 11) echo Nov
+ ;;
+ 12) echo Dec
+ ;;
+ *) echo unknown
+ ;;
+ esac
+}
+
+MY_P=${PN}-$((10#${PV:6:2}))$(convert_month ${PV:4:2})${PV:2:2}
+
+DESCRIPTION="Large-scale Atomic/Molecular Massively Parallel Simulator"
+HOMEPAGE="http://lammps.sandia.gov/"
+SRC_URI="http://lammps.sandia.gov/tars/${MY_P}.tar.gz"
+
+LICENSE="GPL-2"
+SLOT="0"
+KEYWORDS="~amd64"
+IUSE="doc examples gzip lammps-memalign mpi package-dipole package-meam package-rigid"
+
+DEPEND="mpi? ( virtual/mpi )"
+RDEPEND="${DEPEND}"
+
+S="${WORKDIR}/${MY_P}"
+
+lmp_emake() {
+ local LAMMPS_INCLUDEFLAGS="$(usex gzip '-DLAMMPS_GZIP' '')"
+ LAMMPS_INCLUDEFLAGS+="$(usex lammps-memalign ' -DLAMMPS_MEMALIGN' '')"
+
+ # Note: The lammps makefile uses CC to indicate the C++ compiler.
+ emake \
+ ARCHIVE=$(tc-getAR) \
+ CC=$(usex mpi "mpic++" "$(tc-getCXX)") \
+ F90=$(usex mpi "mpif90" "$(tc-getFC)") \
+ LINK=$(usex mpi "mpic++" "$(tc-getCXX)") \
+ CCFLAGS="${CXXFLAGS}" \
+ F90FLAGS="${FCFLAGS}" \
+ LINKFLAGS="${LDFLAGS}" \
+ LMP_INC="${LAMMPS_INCLUDEFLAGS}" \
+ MPI_INC=$(usex mpi '' "-I../STUBS") \
+ MPI_PATH=$(usex mpi '' '-L../STUBS') \
+ MPI_LIB=$(usex mpi '' '-lmpi_stubs') \
+ "$@"
+}
+
+src_compile() {
+ # Compile stubs for serial version.
+ use mpi || lmp_emake -C src stubs
+
+ # Build optional packages.
+ if use package-meam; then
+ lmp_emake -C src yes-meam
+ lmp_emake -j1 -C lib/meam -f Makefile.gfortran
+ fi
+ use package-dipole && emake -C src yes-dipole
+ use package-rigid && emake -C src yes-rigid
+
+ # Compile.
+ lmp_emake -C src serial
+}
+
+src_install() {
+ newbin "src/lmp_serial" "lmp"
+
+ local LAMMPS_POTENTIALS="/usr/share/${PF}/potentials"
+ insinto "${LAMMPS_POTENTIALS}"
+ doins potentials/*
+ echo "LAMMPS_POTENTIALS=${LAMMPS_POTENTIALS}" > 99lammps
+ doenvd 99lammps
+
+ if use examples; then
+ local LAMMPS_EXAMPLES="/usr/share/${PF}/examples"
+ elog "The examples can be found in ${LAMMPS_EXAMPLES}"
+ insinto "${LAMMPS_EXAMPLES}"
+ doins -r examples/*
+ fi
+
+ dodoc README
+ if use doc; then
+ dodoc doc/Manual.pdf
+ dohtml -r doc/*
+ fi
+}
^ permalink raw reply related [flat|nested] 34+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-physics/lammps/
@ 2013-09-18 13:51 Nicolas Bock
0 siblings, 0 replies; 34+ messages in thread
From: Nicolas Bock @ 2013-09-18 13:51 UTC (permalink / raw
To: gentoo-commits
commit: c648f486e3607cc604c1c408a24886ccc425ca22
Author: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
AuthorDate: Wed Sep 18 13:51:08 2013 +0000
Commit: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
CommitDate: Wed Sep 18 13:51:08 2013 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=c648f486
sci-physics/lammps-20130917: Version bump.
Package-Manager: portage-2.2.1
---
sci-physics/lammps/ChangeLog | 5 ++
sci-physics/lammps/lammps-20130917.ebuild | 115 ++++++++++++++++++++++++++++++
2 files changed, 120 insertions(+)
diff --git a/sci-physics/lammps/ChangeLog b/sci-physics/lammps/ChangeLog
index b53b891..9b64e3a 100644
--- a/sci-physics/lammps/ChangeLog
+++ b/sci-physics/lammps/ChangeLog
@@ -2,6 +2,11 @@
# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+*lammps-20130917 (18 Sep 2013)
+
+ 18 Sep 2013; Nicolas Bock <nicolasbock@gmail.com> +lammps-20130917.ebuild:
+ sci-physics/lammps-20130917: Version bump.
+
*lammps-20130830 (02 Sep 2013)
02 Sep 2013; Nicolas Bock <nicolasbock@gmail.com> +lammps-20130830.ebuild:
diff --git a/sci-physics/lammps/lammps-20130917.ebuild b/sci-physics/lammps/lammps-20130917.ebuild
new file mode 100644
index 0000000..fa960e3
--- /dev/null
+++ b/sci-physics/lammps/lammps-20130917.ebuild
@@ -0,0 +1,115 @@
+# Copyright 1999-2013 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-physics/lammps/lammps-20130526.ebuild,v 1.1 2013/06/26 23:53:11 ottxor Exp $
+
+EAPI=5
+
+FORTRAN_NEEDED="package-meam"
+
+inherit eutils fortran-2
+
+convert_month() {
+ case $1 in
+ 01) echo Jan
+ ;;
+ 02) echo Feb
+ ;;
+ 03) echo Mar
+ ;;
+ 04) echo Apr
+ ;;
+ 05) echo May
+ ;;
+ 06) echo Jun
+ ;;
+ 07) echo Jul
+ ;;
+ 08) echo Aug
+ ;;
+ 09) echo Sep
+ ;;
+ 10) echo Oct
+ ;;
+ 11) echo Nov
+ ;;
+ 12) echo Dec
+ ;;
+ *) echo unknown
+ ;;
+ esac
+}
+
+MY_P=${PN}-$((10#${PV:6:2}))$(convert_month ${PV:4:2})${PV:2:2}
+
+DESCRIPTION="Large-scale Atomic/Molecular Massively Parallel Simulator"
+HOMEPAGE="http://lammps.sandia.gov/"
+SRC_URI="http://lammps.sandia.gov/tars/${MY_P}.tar.gz"
+
+LICENSE="GPL-2"
+SLOT="0"
+KEYWORDS="~amd64"
+IUSE="doc examples gzip lammps-memalign mpi package-dipole package-meam package-rigid"
+
+DEPEND="mpi? ( virtual/mpi )"
+RDEPEND="${DEPEND}"
+
+S="${WORKDIR}/${MY_P}"
+
+lmp_emake() {
+ local LAMMPS_INCLUDEFLAGS="$(usex gzip '-DLAMMPS_GZIP' '')"
+ LAMMPS_INCLUDEFLAGS+="$(usex lammps-memalign ' -DLAMMPS_MEMALIGN' '')"
+
+ # Note: The lammps makefile uses CC to indicate the C++ compiler.
+ emake \
+ ARCHIVE=$(tc-getAR) \
+ CC=$(usex mpi "mpic++" "$(tc-getCXX)") \
+ F90=$(usex mpi "mpif90" "$(tc-getFC)") \
+ LINK=$(usex mpi "mpic++" "$(tc-getCXX)") \
+ CCFLAGS="${CXXFLAGS}" \
+ F90FLAGS="${FCFLAGS}" \
+ LINKFLAGS="${LDFLAGS}" \
+ LMP_INC="${LAMMPS_INCLUDEFLAGS}" \
+ MPI_INC=$(usex mpi '' "-I../STUBS") \
+ MPI_PATH=$(usex mpi '' '-L../STUBS') \
+ MPI_LIB=$(usex mpi '' '-lmpi_stubs') \
+ "$@"
+}
+
+src_compile() {
+ # Compile stubs for serial version.
+ use mpi || lmp_emake -C src stubs
+
+ # Build optional packages.
+ if use package-meam; then
+ lmp_emake -C src yes-meam
+ lmp_emake -j1 -C lib/meam -f Makefile.gfortran
+ fi
+ use package-dipole && emake -C src yes-dipole
+ use package-rigid && emake -C src yes-rigid
+
+ # Compile.
+ lmp_emake -C src serial
+}
+
+src_install() {
+ newbin "src/lmp_serial" "lmp"
+
+ local LAMMPS_POTENTIALS="/usr/share/${PF}/potentials"
+ insinto "${LAMMPS_POTENTIALS}"
+ doins potentials/*
+ echo "LAMMPS_POTENTIALS=${LAMMPS_POTENTIALS}" > 99lammps
+ doenvd 99lammps
+
+ if use examples; then
+ local LAMMPS_EXAMPLES="/usr/share/${PF}/examples"
+ elog "The examples can be found in ${LAMMPS_EXAMPLES}"
+ insinto "${LAMMPS_EXAMPLES}"
+ doins -r examples/*
+ fi
+
+ dodoc README
+ if use doc; then
+ dodoc doc/Manual.pdf
+ dohtml -r doc/*
+ fi
+}
^ permalink raw reply related [flat|nested] 34+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-physics/lammps/
@ 2013-09-27 15:17 Nicolas Bock
0 siblings, 0 replies; 34+ messages in thread
From: Nicolas Bock @ 2013-09-27 15:17 UTC (permalink / raw
To: gentoo-commits
commit: 5e8eac3827cd40a0bac8164285f7a5a6c9080267
Author: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
AuthorDate: Fri Sep 27 15:17:34 2013 +0000
Commit: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
CommitDate: Fri Sep 27 15:17:34 2013 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=5e8eac38
sci-physics/lammps-20130923: Version bump.
I also removed older versions to clean up a bit.
Package-Manager: portage-2.2.1
---
sci-physics/lammps/ChangeLog | 7 ++
sci-physics/lammps/lammps-20130701.ebuild | 105 -------------------
sci-physics/lammps/lammps-20130711.ebuild | 115 ---------------------
...mmps-20130708.ebuild => lammps-20130923.ebuild} | 0
4 files changed, 7 insertions(+), 220 deletions(-)
diff --git a/sci-physics/lammps/ChangeLog b/sci-physics/lammps/ChangeLog
index 9b64e3a..de17828 100644
--- a/sci-physics/lammps/ChangeLog
+++ b/sci-physics/lammps/ChangeLog
@@ -2,6 +2,13 @@
# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+*lammps-20130923 (27 Sep 2013)
+
+ 27 Sep 2013; Nicolas Bock <nicolasbock@gmail.com> +lammps-20130923.ebuild,
+ -lammps-20130701.ebuild, -lammps-20130708.ebuild, -lammps-20130711.ebuild:
+ sci-physics/lammps-20130923: Version bump. I also removed older versions to
+ clean up a bit.
+
*lammps-20130917 (18 Sep 2013)
18 Sep 2013; Nicolas Bock <nicolasbock@gmail.com> +lammps-20130917.ebuild:
diff --git a/sci-physics/lammps/lammps-20130701.ebuild b/sci-physics/lammps/lammps-20130701.ebuild
deleted file mode 100644
index 4793d83..0000000
--- a/sci-physics/lammps/lammps-20130701.ebuild
+++ /dev/null
@@ -1,105 +0,0 @@
-# Copyright 1999-2013 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-physics/lammps/lammps-20130526.ebuild,v 1.1 2013/06/26 23:53:11 ottxor Exp $
-
-EAPI=5
-
-FORTRAN_NEEDED="package-meam"
-
-inherit eutils fortran-2
-
-convert_month() {
- case $1 in
- 01) echo Jan
- ;;
- 02) echo Feb
- ;;
- 03) echo Mar
- ;;
- 04) echo Apr
- ;;
- 05) echo May
- ;;
- 06) echo Jun
- ;;
- 07) echo Jul
- ;;
- 08) echo Aug
- ;;
- 09) echo Sep
- ;;
- 10) echo Oct
- ;;
- 11) echo Nov
- ;;
- 12) echo Dec
- ;;
- *) echo unknown
- ;;
- esac
-}
-
-MY_P=${PN}-$((${PV:6:2}))$(convert_month ${PV:4:2})${PV:2:2}
-
-DESCRIPTION="Large-scale Atomic/Molecular Massively Parallel Simulator"
-HOMEPAGE="http://lammps.sandia.gov/"
-SRC_URI="http://lammps.sandia.gov/tars/${MY_P}.tar.gz"
-
-LICENSE="GPL-2"
-SLOT="0"
-KEYWORDS="~amd64"
-IUSE="doc examples gzip lammps-memalign mpi package-dipole package-meam package-rigid"
-
-DEPEND="mpi? ( virtual/mpi )"
-RDEPEND="${DEPEND}"
-
-S="${WORKDIR}/${MY_P}"
-
-lmp_emake() {
- local LAMMPS_INCLUDEFLAGS="$(usex gzip '-DLAMMPS_GZIP' '')"
- LAMMPS_INCLUDEFLAGS+="$(usex lammps-memalign ' -DLAMMPS_MEMALIGN' '')"
-
- # Note: The lammps makefile uses CC to indicate the C++ compiler.
- emake \
- ARCHIVE=$(tc-getAR) \
- CC=$(usex mpi "mpic++" "$(tc-getCXX)") \
- F90=$(usex mpi "mpif90" "$(tc-getFC)") \
- LINK=$(usex mpi "mpic++" "$(tc-getCXX)") \
- CCFLAGS="${CXXFLAGS}" \
- F90FLAGS="${FCFLAGS}" \
- LINKFLAGS="${LDFLAGS}" \
- LMP_INC="${LAMMPS_INCLUDEFLAGS}" \
- MPI_INC=$(usex mpi '' "-I../STUBS") \
- MPI_PATH=$(usex mpi '' '-L../STUBS') \
- MPI_LIB=$(usex mpi '' '-lmpi_stubs') \
- "$@"
-}
-
-src_compile() {
- # Compile stubs for serial version.
- use mpi || lmp_emake -C src stubs
-
- # Build optional packages.
- if use package-meam; then
- lmp_emake -C src yes-meam
- lmp_emake -j1 -C lib/meam -f Makefile.gfortran
- fi
- use package-dipole && emake -C src yes-dipole
- use package-rigid && emake -C src yes-rigid
-
- # Compile.
- lmp_emake -C src serial
-}
-
-src_install() {
- newbin "src/lmp_serial" "lmp"
- if use examples; then
- insinto "/usr/share/doc/${PF}"
- doins -r examples
- fi
- dodoc README
- if use doc; then
- dodoc doc/Manual.pdf
- dohtml -r doc/*
- fi
-}
diff --git a/sci-physics/lammps/lammps-20130711.ebuild b/sci-physics/lammps/lammps-20130711.ebuild
deleted file mode 100644
index fa960e3..0000000
--- a/sci-physics/lammps/lammps-20130711.ebuild
+++ /dev/null
@@ -1,115 +0,0 @@
-# Copyright 1999-2013 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-physics/lammps/lammps-20130526.ebuild,v 1.1 2013/06/26 23:53:11 ottxor Exp $
-
-EAPI=5
-
-FORTRAN_NEEDED="package-meam"
-
-inherit eutils fortran-2
-
-convert_month() {
- case $1 in
- 01) echo Jan
- ;;
- 02) echo Feb
- ;;
- 03) echo Mar
- ;;
- 04) echo Apr
- ;;
- 05) echo May
- ;;
- 06) echo Jun
- ;;
- 07) echo Jul
- ;;
- 08) echo Aug
- ;;
- 09) echo Sep
- ;;
- 10) echo Oct
- ;;
- 11) echo Nov
- ;;
- 12) echo Dec
- ;;
- *) echo unknown
- ;;
- esac
-}
-
-MY_P=${PN}-$((10#${PV:6:2}))$(convert_month ${PV:4:2})${PV:2:2}
-
-DESCRIPTION="Large-scale Atomic/Molecular Massively Parallel Simulator"
-HOMEPAGE="http://lammps.sandia.gov/"
-SRC_URI="http://lammps.sandia.gov/tars/${MY_P}.tar.gz"
-
-LICENSE="GPL-2"
-SLOT="0"
-KEYWORDS="~amd64"
-IUSE="doc examples gzip lammps-memalign mpi package-dipole package-meam package-rigid"
-
-DEPEND="mpi? ( virtual/mpi )"
-RDEPEND="${DEPEND}"
-
-S="${WORKDIR}/${MY_P}"
-
-lmp_emake() {
- local LAMMPS_INCLUDEFLAGS="$(usex gzip '-DLAMMPS_GZIP' '')"
- LAMMPS_INCLUDEFLAGS+="$(usex lammps-memalign ' -DLAMMPS_MEMALIGN' '')"
-
- # Note: The lammps makefile uses CC to indicate the C++ compiler.
- emake \
- ARCHIVE=$(tc-getAR) \
- CC=$(usex mpi "mpic++" "$(tc-getCXX)") \
- F90=$(usex mpi "mpif90" "$(tc-getFC)") \
- LINK=$(usex mpi "mpic++" "$(tc-getCXX)") \
- CCFLAGS="${CXXFLAGS}" \
- F90FLAGS="${FCFLAGS}" \
- LINKFLAGS="${LDFLAGS}" \
- LMP_INC="${LAMMPS_INCLUDEFLAGS}" \
- MPI_INC=$(usex mpi '' "-I../STUBS") \
- MPI_PATH=$(usex mpi '' '-L../STUBS') \
- MPI_LIB=$(usex mpi '' '-lmpi_stubs') \
- "$@"
-}
-
-src_compile() {
- # Compile stubs for serial version.
- use mpi || lmp_emake -C src stubs
-
- # Build optional packages.
- if use package-meam; then
- lmp_emake -C src yes-meam
- lmp_emake -j1 -C lib/meam -f Makefile.gfortran
- fi
- use package-dipole && emake -C src yes-dipole
- use package-rigid && emake -C src yes-rigid
-
- # Compile.
- lmp_emake -C src serial
-}
-
-src_install() {
- newbin "src/lmp_serial" "lmp"
-
- local LAMMPS_POTENTIALS="/usr/share/${PF}/potentials"
- insinto "${LAMMPS_POTENTIALS}"
- doins potentials/*
- echo "LAMMPS_POTENTIALS=${LAMMPS_POTENTIALS}" > 99lammps
- doenvd 99lammps
-
- if use examples; then
- local LAMMPS_EXAMPLES="/usr/share/${PF}/examples"
- elog "The examples can be found in ${LAMMPS_EXAMPLES}"
- insinto "${LAMMPS_EXAMPLES}"
- doins -r examples/*
- fi
-
- dodoc README
- if use doc; then
- dodoc doc/Manual.pdf
- dohtml -r doc/*
- fi
-}
diff --git a/sci-physics/lammps/lammps-20130708.ebuild b/sci-physics/lammps/lammps-20130923.ebuild
similarity index 100%
rename from sci-physics/lammps/lammps-20130708.ebuild
rename to sci-physics/lammps/lammps-20130923.ebuild
^ permalink raw reply related [flat|nested] 34+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-physics/lammps/
@ 2013-10-16 4:49 Nicolas Bock
0 siblings, 0 replies; 34+ messages in thread
From: Nicolas Bock @ 2013-10-16 4:49 UTC (permalink / raw
To: gentoo-commits
commit: 5278c04ac8b71bc9224bd58e44f48ff4da4e3536
Author: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
AuthorDate: Wed Oct 16 04:48:31 2013 +0000
Commit: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
CommitDate: Wed Oct 16 04:48:40 2013 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=5278c04a
sci-physics/lammps-20130930: Version bump.
Package-Manager: portage-2.2.1
---
sci-physics/lammps/ChangeLog | 5 ++
sci-physics/lammps/lammps-20130930.ebuild | 115 ++++++++++++++++++++++++++++++
2 files changed, 120 insertions(+)
diff --git a/sci-physics/lammps/ChangeLog b/sci-physics/lammps/ChangeLog
index de17828..68103a1 100644
--- a/sci-physics/lammps/ChangeLog
+++ b/sci-physics/lammps/ChangeLog
@@ -2,6 +2,11 @@
# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+*lammps-20130930 (16 Oct 2013)
+
+ 16 Oct 2013; Nicolas Bock <nicolasbock@gmail.com> +lammps-20130930.ebuild:
+ sci-physics/lammps-20130930: Version bump.
+
*lammps-20130923 (27 Sep 2013)
27 Sep 2013; Nicolas Bock <nicolasbock@gmail.com> +lammps-20130923.ebuild,
diff --git a/sci-physics/lammps/lammps-20130930.ebuild b/sci-physics/lammps/lammps-20130930.ebuild
new file mode 100644
index 0000000..9ef5cdd
--- /dev/null
+++ b/sci-physics/lammps/lammps-20130930.ebuild
@@ -0,0 +1,115 @@
+# Copyright 1999-2013 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-physics/lammps/lammps-20130526.ebuild,v 1.1 2013/06/26 23:53:11 ottxor Exp $
+
+EAPI=5
+
+FORTRAN_NEEDED="package-meam"
+
+inherit eutils fortran-2
+
+convert_month() {
+ case $1 in
+ 01) echo Jan
+ ;;
+ 02) echo Feb
+ ;;
+ 03) echo Mar
+ ;;
+ 04) echo Apr
+ ;;
+ 05) echo May
+ ;;
+ 06) echo Jun
+ ;;
+ 07) echo Jul
+ ;;
+ 08) echo Aug
+ ;;
+ 09) echo Sep
+ ;;
+ 10) echo Oct
+ ;;
+ 11) echo Nov
+ ;;
+ 12) echo Dec
+ ;;
+ *) echo unknown
+ ;;
+ esac
+}
+
+MY_P=${PN}-$((10#${PV:6:2}))$(convert_month ${PV:4:2})${PV:2:2}
+
+DESCRIPTION="Large-scale Atomic/Molecular Massively Parallel Simulator"
+HOMEPAGE="http://lammps.sandia.gov/"
+SRC_URI="http://lammps.sandia.gov/tars/${MY_P}.tar.gz"
+
+LICENSE="GPL-2"
+SLOT="0"
+KEYWORDS="~amd64"
+IUSE="doc examples gzip lammps-memalign mpi package-dipole package-meam package-rigid"
+
+DEPEND="mpi? ( virtual/mpi )"
+RDEPEND="${DEPEND}"
+
+S="${WORKDIR}/${MY_P}"
+
+lmp_emake() {
+ local LAMMPS_INCLUDEFLAGS="$(usex gzip '-DLAMMPS_GZIP' '')"
+ LAMMPS_INCLUDEFLAGS+="$(usex lammps-memalign ' -DLAMMPS_MEMALIGN' '')"
+
+ # Note: The lammps makefile uses CC to indicate the C++ compiler.
+ emake \
+ ARCHIVE=$(tc-getAR) \
+ CC=$(usex mpi "mpic++" "$(tc-getCXX)") \
+ F90=$(usex mpi "mpif90" "$(tc-getFC)") \
+ LINK=$(usex mpi "mpic++" "$(tc-getCXX)") \
+ CCFLAGS="${CXXFLAGS}" \
+ F90FLAGS="${FCFLAGS}" \
+ LINKFLAGS="${LDFLAGS}" \
+ LMP_INC="${LAMMPS_INCLUDEFLAGS}" \
+ MPI_INC=$(usex mpi '' "-I../STUBS") \
+ MPI_PATH=$(usex mpi '' '-L../STUBS') \
+ MPI_LIB=$(usex mpi '' '-lmpi_stubs') \
+ "$@"
+}
+
+src_compile() {
+ # Compile stubs for serial version.
+ use mpi || lmp_emake -C src stubs
+
+ # Build optional packages.
+ if use package-meam; then
+ lmp_emake -C src yes-meam
+ lmp_emake -j1 -C lib/meam -f Makefile.gfortran
+ fi
+ use package-dipole && emake -C src yes-dipole
+ use package-rigid && emake -C src yes-rigid
+
+ # Compile.
+ lmp_emake -C src serial
+}
+
+src_install() {
+ newbin "src/lmp_serial" "lmp"
+
+ local LAMMPS_POTENTIALS="/usr/share/${PF}/potentials"
+ insinto "${LAMMPS_POTENTIALS}"
+ doins potentials/*
+ echo "LAMMPS_POTENTIALS=${LAMMPS_POTENTIALS}" > 99lammps
+ doenvd 99lammps
+
+ if use examples; then
+ local LAMMPS_EXAMPLES="/usr/share/${PF}/examples"
+ elog "The examples can be found in ${LAMMPS_EXAMPLES}"
+ insinto "${LAMMPS_EXAMPLES}"
+ doins -r examples/*
+ fi
+
+ dodoc README
+ if use doc; then
+ dodoc doc/Manual.pdf
+ dohtml -r doc/*
+ fi
+}
^ permalink raw reply related [flat|nested] 34+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-physics/lammps/
@ 2013-11-11 21:48 Nicolas Bock
0 siblings, 0 replies; 34+ messages in thread
From: Nicolas Bock @ 2013-11-11 21:48 UTC (permalink / raw
To: gentoo-commits
commit: eeacec667754fff85508f56fe25ec773b55b5766
Author: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
AuthorDate: Mon Nov 11 20:57:44 2013 +0000
Commit: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
CommitDate: Mon Nov 11 21:48:23 2013 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=eeacec66
sci-physics/lammps-20131111: Version bump.
Package-Manager: portage-2.2.7
---
sci-physics/lammps/ChangeLog | 5 ++
sci-physics/lammps/lammps-20131111.ebuild | 115 ++++++++++++++++++++++++++++++
2 files changed, 120 insertions(+)
diff --git a/sci-physics/lammps/ChangeLog b/sci-physics/lammps/ChangeLog
index 68103a1..17335b1 100644
--- a/sci-physics/lammps/ChangeLog
+++ b/sci-physics/lammps/ChangeLog
@@ -2,6 +2,11 @@
# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+*lammps-20131111 (11 Nov 2013)
+
+ 11 Nov 2013; Nicolas Bock <nicolasbock@gmail.com> +lammps-20131111.ebuild:
+ sci-physics/lammps-20131111: Version bump.
+
*lammps-20130930 (16 Oct 2013)
16 Oct 2013; Nicolas Bock <nicolasbock@gmail.com> +lammps-20130930.ebuild:
diff --git a/sci-physics/lammps/lammps-20131111.ebuild b/sci-physics/lammps/lammps-20131111.ebuild
new file mode 100644
index 0000000..9ef5cdd
--- /dev/null
+++ b/sci-physics/lammps/lammps-20131111.ebuild
@@ -0,0 +1,115 @@
+# Copyright 1999-2013 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-physics/lammps/lammps-20130526.ebuild,v 1.1 2013/06/26 23:53:11 ottxor Exp $
+
+EAPI=5
+
+FORTRAN_NEEDED="package-meam"
+
+inherit eutils fortran-2
+
+convert_month() {
+ case $1 in
+ 01) echo Jan
+ ;;
+ 02) echo Feb
+ ;;
+ 03) echo Mar
+ ;;
+ 04) echo Apr
+ ;;
+ 05) echo May
+ ;;
+ 06) echo Jun
+ ;;
+ 07) echo Jul
+ ;;
+ 08) echo Aug
+ ;;
+ 09) echo Sep
+ ;;
+ 10) echo Oct
+ ;;
+ 11) echo Nov
+ ;;
+ 12) echo Dec
+ ;;
+ *) echo unknown
+ ;;
+ esac
+}
+
+MY_P=${PN}-$((10#${PV:6:2}))$(convert_month ${PV:4:2})${PV:2:2}
+
+DESCRIPTION="Large-scale Atomic/Molecular Massively Parallel Simulator"
+HOMEPAGE="http://lammps.sandia.gov/"
+SRC_URI="http://lammps.sandia.gov/tars/${MY_P}.tar.gz"
+
+LICENSE="GPL-2"
+SLOT="0"
+KEYWORDS="~amd64"
+IUSE="doc examples gzip lammps-memalign mpi package-dipole package-meam package-rigid"
+
+DEPEND="mpi? ( virtual/mpi )"
+RDEPEND="${DEPEND}"
+
+S="${WORKDIR}/${MY_P}"
+
+lmp_emake() {
+ local LAMMPS_INCLUDEFLAGS="$(usex gzip '-DLAMMPS_GZIP' '')"
+ LAMMPS_INCLUDEFLAGS+="$(usex lammps-memalign ' -DLAMMPS_MEMALIGN' '')"
+
+ # Note: The lammps makefile uses CC to indicate the C++ compiler.
+ emake \
+ ARCHIVE=$(tc-getAR) \
+ CC=$(usex mpi "mpic++" "$(tc-getCXX)") \
+ F90=$(usex mpi "mpif90" "$(tc-getFC)") \
+ LINK=$(usex mpi "mpic++" "$(tc-getCXX)") \
+ CCFLAGS="${CXXFLAGS}" \
+ F90FLAGS="${FCFLAGS}" \
+ LINKFLAGS="${LDFLAGS}" \
+ LMP_INC="${LAMMPS_INCLUDEFLAGS}" \
+ MPI_INC=$(usex mpi '' "-I../STUBS") \
+ MPI_PATH=$(usex mpi '' '-L../STUBS') \
+ MPI_LIB=$(usex mpi '' '-lmpi_stubs') \
+ "$@"
+}
+
+src_compile() {
+ # Compile stubs for serial version.
+ use mpi || lmp_emake -C src stubs
+
+ # Build optional packages.
+ if use package-meam; then
+ lmp_emake -C src yes-meam
+ lmp_emake -j1 -C lib/meam -f Makefile.gfortran
+ fi
+ use package-dipole && emake -C src yes-dipole
+ use package-rigid && emake -C src yes-rigid
+
+ # Compile.
+ lmp_emake -C src serial
+}
+
+src_install() {
+ newbin "src/lmp_serial" "lmp"
+
+ local LAMMPS_POTENTIALS="/usr/share/${PF}/potentials"
+ insinto "${LAMMPS_POTENTIALS}"
+ doins potentials/*
+ echo "LAMMPS_POTENTIALS=${LAMMPS_POTENTIALS}" > 99lammps
+ doenvd 99lammps
+
+ if use examples; then
+ local LAMMPS_EXAMPLES="/usr/share/${PF}/examples"
+ elog "The examples can be found in ${LAMMPS_EXAMPLES}"
+ insinto "${LAMMPS_EXAMPLES}"
+ doins -r examples/*
+ fi
+
+ dodoc README
+ if use doc; then
+ dodoc doc/Manual.pdf
+ dohtml -r doc/*
+ fi
+}
^ permalink raw reply related [flat|nested] 34+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-physics/lammps/
@ 2013-11-22 19:33 Nicolas Bock
0 siblings, 0 replies; 34+ messages in thread
From: Nicolas Bock @ 2013-11-22 19:33 UTC (permalink / raw
To: gentoo-commits
commit: a4b5d437082d2e65136271532ff3ad58fd06d0bb
Author: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
AuthorDate: Fri Nov 22 19:32:32 2013 +0000
Commit: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
CommitDate: Fri Nov 22 19:32:32 2013 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=a4b5d437
sci-physics/lammps-20131123: Version bump.
Package-Manager: portage-2.2.7
---
sci-physics/lammps/ChangeLog | 5 ++
sci-physics/lammps/lammps-20131123.ebuild | 115 ++++++++++++++++++++++++++++++
2 files changed, 120 insertions(+)
diff --git a/sci-physics/lammps/ChangeLog b/sci-physics/lammps/ChangeLog
index 17335b1..d48b682 100644
--- a/sci-physics/lammps/ChangeLog
+++ b/sci-physics/lammps/ChangeLog
@@ -2,6 +2,11 @@
# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+*lammps-20131123 (22 Nov 2013)
+
+ 22 Nov 2013; Nicolas Bock <nicolasbock@gmail.com> +lammps-20131123.ebuild:
+ sci-physics/lammps-20131123: Version bump.
+
*lammps-20131111 (11 Nov 2013)
11 Nov 2013; Nicolas Bock <nicolasbock@gmail.com> +lammps-20131111.ebuild:
diff --git a/sci-physics/lammps/lammps-20131123.ebuild b/sci-physics/lammps/lammps-20131123.ebuild
new file mode 100644
index 0000000..9ef5cdd
--- /dev/null
+++ b/sci-physics/lammps/lammps-20131123.ebuild
@@ -0,0 +1,115 @@
+# Copyright 1999-2013 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-physics/lammps/lammps-20130526.ebuild,v 1.1 2013/06/26 23:53:11 ottxor Exp $
+
+EAPI=5
+
+FORTRAN_NEEDED="package-meam"
+
+inherit eutils fortran-2
+
+convert_month() {
+ case $1 in
+ 01) echo Jan
+ ;;
+ 02) echo Feb
+ ;;
+ 03) echo Mar
+ ;;
+ 04) echo Apr
+ ;;
+ 05) echo May
+ ;;
+ 06) echo Jun
+ ;;
+ 07) echo Jul
+ ;;
+ 08) echo Aug
+ ;;
+ 09) echo Sep
+ ;;
+ 10) echo Oct
+ ;;
+ 11) echo Nov
+ ;;
+ 12) echo Dec
+ ;;
+ *) echo unknown
+ ;;
+ esac
+}
+
+MY_P=${PN}-$((10#${PV:6:2}))$(convert_month ${PV:4:2})${PV:2:2}
+
+DESCRIPTION="Large-scale Atomic/Molecular Massively Parallel Simulator"
+HOMEPAGE="http://lammps.sandia.gov/"
+SRC_URI="http://lammps.sandia.gov/tars/${MY_P}.tar.gz"
+
+LICENSE="GPL-2"
+SLOT="0"
+KEYWORDS="~amd64"
+IUSE="doc examples gzip lammps-memalign mpi package-dipole package-meam package-rigid"
+
+DEPEND="mpi? ( virtual/mpi )"
+RDEPEND="${DEPEND}"
+
+S="${WORKDIR}/${MY_P}"
+
+lmp_emake() {
+ local LAMMPS_INCLUDEFLAGS="$(usex gzip '-DLAMMPS_GZIP' '')"
+ LAMMPS_INCLUDEFLAGS+="$(usex lammps-memalign ' -DLAMMPS_MEMALIGN' '')"
+
+ # Note: The lammps makefile uses CC to indicate the C++ compiler.
+ emake \
+ ARCHIVE=$(tc-getAR) \
+ CC=$(usex mpi "mpic++" "$(tc-getCXX)") \
+ F90=$(usex mpi "mpif90" "$(tc-getFC)") \
+ LINK=$(usex mpi "mpic++" "$(tc-getCXX)") \
+ CCFLAGS="${CXXFLAGS}" \
+ F90FLAGS="${FCFLAGS}" \
+ LINKFLAGS="${LDFLAGS}" \
+ LMP_INC="${LAMMPS_INCLUDEFLAGS}" \
+ MPI_INC=$(usex mpi '' "-I../STUBS") \
+ MPI_PATH=$(usex mpi '' '-L../STUBS') \
+ MPI_LIB=$(usex mpi '' '-lmpi_stubs') \
+ "$@"
+}
+
+src_compile() {
+ # Compile stubs for serial version.
+ use mpi || lmp_emake -C src stubs
+
+ # Build optional packages.
+ if use package-meam; then
+ lmp_emake -C src yes-meam
+ lmp_emake -j1 -C lib/meam -f Makefile.gfortran
+ fi
+ use package-dipole && emake -C src yes-dipole
+ use package-rigid && emake -C src yes-rigid
+
+ # Compile.
+ lmp_emake -C src serial
+}
+
+src_install() {
+ newbin "src/lmp_serial" "lmp"
+
+ local LAMMPS_POTENTIALS="/usr/share/${PF}/potentials"
+ insinto "${LAMMPS_POTENTIALS}"
+ doins potentials/*
+ echo "LAMMPS_POTENTIALS=${LAMMPS_POTENTIALS}" > 99lammps
+ doenvd 99lammps
+
+ if use examples; then
+ local LAMMPS_EXAMPLES="/usr/share/${PF}/examples"
+ elog "The examples can be found in ${LAMMPS_EXAMPLES}"
+ insinto "${LAMMPS_EXAMPLES}"
+ doins -r examples/*
+ fi
+
+ dodoc README
+ if use doc; then
+ dodoc doc/Manual.pdf
+ dohtml -r doc/*
+ fi
+}
^ permalink raw reply related [flat|nested] 34+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-physics/lammps/
@ 2013-12-04 19:04 Nicolas Bock
0 siblings, 0 replies; 34+ messages in thread
From: Nicolas Bock @ 2013-12-04 19:04 UTC (permalink / raw
To: gentoo-commits
commit: 81f582cdd4804ca7fa30088028cc0f41f137ad8f
Author: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
AuthorDate: Wed Dec 4 19:04:07 2013 +0000
Commit: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
CommitDate: Wed Dec 4 19:04:07 2013 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=81f582cd
sci-physics/lammps: Version bump to 20121201.
Package-Manager: portage-2.2.7
---
sci-physics/lammps/ChangeLog | 5 ++
sci-physics/lammps/lammps-20131201.ebuild | 115 ++++++++++++++++++++++++++++++
2 files changed, 120 insertions(+)
diff --git a/sci-physics/lammps/ChangeLog b/sci-physics/lammps/ChangeLog
index d48b682..44a640e 100644
--- a/sci-physics/lammps/ChangeLog
+++ b/sci-physics/lammps/ChangeLog
@@ -2,6 +2,11 @@
# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+*lammps-20131201 (04 Dec 2013)
+
+ 04 Dec 2013; Nicolas Bock <nicolasbock@gmail.com> +lammps-20131201.ebuild:
+ sci-physics/lammps: Version bump to 20121201.
+
*lammps-20131123 (22 Nov 2013)
22 Nov 2013; Nicolas Bock <nicolasbock@gmail.com> +lammps-20131123.ebuild:
diff --git a/sci-physics/lammps/lammps-20131201.ebuild b/sci-physics/lammps/lammps-20131201.ebuild
new file mode 100644
index 0000000..9ef5cdd
--- /dev/null
+++ b/sci-physics/lammps/lammps-20131201.ebuild
@@ -0,0 +1,115 @@
+# Copyright 1999-2013 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-physics/lammps/lammps-20130526.ebuild,v 1.1 2013/06/26 23:53:11 ottxor Exp $
+
+EAPI=5
+
+FORTRAN_NEEDED="package-meam"
+
+inherit eutils fortran-2
+
+convert_month() {
+ case $1 in
+ 01) echo Jan
+ ;;
+ 02) echo Feb
+ ;;
+ 03) echo Mar
+ ;;
+ 04) echo Apr
+ ;;
+ 05) echo May
+ ;;
+ 06) echo Jun
+ ;;
+ 07) echo Jul
+ ;;
+ 08) echo Aug
+ ;;
+ 09) echo Sep
+ ;;
+ 10) echo Oct
+ ;;
+ 11) echo Nov
+ ;;
+ 12) echo Dec
+ ;;
+ *) echo unknown
+ ;;
+ esac
+}
+
+MY_P=${PN}-$((10#${PV:6:2}))$(convert_month ${PV:4:2})${PV:2:2}
+
+DESCRIPTION="Large-scale Atomic/Molecular Massively Parallel Simulator"
+HOMEPAGE="http://lammps.sandia.gov/"
+SRC_URI="http://lammps.sandia.gov/tars/${MY_P}.tar.gz"
+
+LICENSE="GPL-2"
+SLOT="0"
+KEYWORDS="~amd64"
+IUSE="doc examples gzip lammps-memalign mpi package-dipole package-meam package-rigid"
+
+DEPEND="mpi? ( virtual/mpi )"
+RDEPEND="${DEPEND}"
+
+S="${WORKDIR}/${MY_P}"
+
+lmp_emake() {
+ local LAMMPS_INCLUDEFLAGS="$(usex gzip '-DLAMMPS_GZIP' '')"
+ LAMMPS_INCLUDEFLAGS+="$(usex lammps-memalign ' -DLAMMPS_MEMALIGN' '')"
+
+ # Note: The lammps makefile uses CC to indicate the C++ compiler.
+ emake \
+ ARCHIVE=$(tc-getAR) \
+ CC=$(usex mpi "mpic++" "$(tc-getCXX)") \
+ F90=$(usex mpi "mpif90" "$(tc-getFC)") \
+ LINK=$(usex mpi "mpic++" "$(tc-getCXX)") \
+ CCFLAGS="${CXXFLAGS}" \
+ F90FLAGS="${FCFLAGS}" \
+ LINKFLAGS="${LDFLAGS}" \
+ LMP_INC="${LAMMPS_INCLUDEFLAGS}" \
+ MPI_INC=$(usex mpi '' "-I../STUBS") \
+ MPI_PATH=$(usex mpi '' '-L../STUBS') \
+ MPI_LIB=$(usex mpi '' '-lmpi_stubs') \
+ "$@"
+}
+
+src_compile() {
+ # Compile stubs for serial version.
+ use mpi || lmp_emake -C src stubs
+
+ # Build optional packages.
+ if use package-meam; then
+ lmp_emake -C src yes-meam
+ lmp_emake -j1 -C lib/meam -f Makefile.gfortran
+ fi
+ use package-dipole && emake -C src yes-dipole
+ use package-rigid && emake -C src yes-rigid
+
+ # Compile.
+ lmp_emake -C src serial
+}
+
+src_install() {
+ newbin "src/lmp_serial" "lmp"
+
+ local LAMMPS_POTENTIALS="/usr/share/${PF}/potentials"
+ insinto "${LAMMPS_POTENTIALS}"
+ doins potentials/*
+ echo "LAMMPS_POTENTIALS=${LAMMPS_POTENTIALS}" > 99lammps
+ doenvd 99lammps
+
+ if use examples; then
+ local LAMMPS_EXAMPLES="/usr/share/${PF}/examples"
+ elog "The examples can be found in ${LAMMPS_EXAMPLES}"
+ insinto "${LAMMPS_EXAMPLES}"
+ doins -r examples/*
+ fi
+
+ dodoc README
+ if use doc; then
+ dodoc doc/Manual.pdf
+ dohtml -r doc/*
+ fi
+}
^ permalink raw reply related [flat|nested] 34+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-physics/lammps/
@ 2013-12-13 19:12 Nicolas Bock
0 siblings, 0 replies; 34+ messages in thread
From: Nicolas Bock @ 2013-12-13 19:12 UTC (permalink / raw
To: gentoo-commits
commit: 5282c34a575e3fa67292a8c6e078af65e9f84b72
Author: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
AuthorDate: Fri Dec 13 19:11:24 2013 +0000
Commit: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
CommitDate: Fri Dec 13 19:11:24 2013 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=5282c34a
sci-physics/lammps: updated maintainer email to gentoo.org
Package-Manager: portage-2.2.7
---
sci-physics/lammps/ChangeLog | 3 +++
sci-physics/lammps/metadata.xml | 2 +-
2 files changed, 4 insertions(+), 1 deletion(-)
diff --git a/sci-physics/lammps/ChangeLog b/sci-physics/lammps/ChangeLog
index 44a640e..af20ee2 100644
--- a/sci-physics/lammps/ChangeLog
+++ b/sci-physics/lammps/ChangeLog
@@ -2,6 +2,9 @@
# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+ 13 Dec 2013; Nicolas Bock <nicolasbock@gentoo.org> metadata.xml:
+ sci-physics/lammps: updated maintainer email to gentoo.org
+
*lammps-20131201 (04 Dec 2013)
04 Dec 2013; Nicolas Bock <nicolasbock@gmail.com> +lammps-20131201.ebuild:
diff --git a/sci-physics/lammps/metadata.xml b/sci-physics/lammps/metadata.xml
index 1acfbc7..7a1dc94 100644
--- a/sci-physics/lammps/metadata.xml
+++ b/sci-physics/lammps/metadata.xml
@@ -25,7 +25,7 @@
</use>
<herd>sci-physics</herd>
<maintainer>
- <email>nicolasbock@gmail.com</email>
+ <email>nicolasbock@gentoo.org</email>
</maintainer>
</pkgmetadata>
^ permalink raw reply related [flat|nested] 34+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-physics/lammps/
@ 2013-12-22 0:13 Christoph Junghans
0 siblings, 0 replies; 34+ messages in thread
From: Christoph Junghans @ 2013-12-22 0:13 UTC (permalink / raw
To: gentoo-commits
commit: 438bbf043e0ca5aa953a5f6bd9784e80870cbdbe
Author: Christoph Junghans <ottxor <AT> gentoo <DOT> org>
AuthorDate: Sun Dec 22 00:13:35 2013 +0000
Commit: Christoph Junghans <ottxor <AT> gentoo <DOT> org>
CommitDate: Sun Dec 22 00:13:35 2013 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=438bbf04
remove elog message
Package-Manager: portage-2.2.7
---
sci-physics/lammps/ChangeLog | 6 ++++++
sci-physics/lammps/lammps-20130816.ebuild | 1 -
sci-physics/lammps/lammps-20130830.ebuild | 1 -
sci-physics/lammps/lammps-20130917.ebuild | 1 -
sci-physics/lammps/lammps-20130923.ebuild | 1 -
sci-physics/lammps/lammps-20130930.ebuild | 1 -
sci-physics/lammps/lammps-20131111.ebuild | 1 -
sci-physics/lammps/lammps-20131123.ebuild | 1 -
sci-physics/lammps/lammps-20131201.ebuild | 1 -
9 files changed, 6 insertions(+), 8 deletions(-)
diff --git a/sci-physics/lammps/ChangeLog b/sci-physics/lammps/ChangeLog
index af20ee2..76ef3a9 100644
--- a/sci-physics/lammps/ChangeLog
+++ b/sci-physics/lammps/ChangeLog
@@ -2,6 +2,12 @@
# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+ 22 Dec 2013; Christoph Junghans <ottxor@gentoo.org> lammps-20130816.ebuild,
+ lammps-20130830.ebuild, lammps-20130917.ebuild, lammps-20130923.ebuild,
+ lammps-20130930.ebuild, lammps-20131111.ebuild, lammps-20131123.ebuild,
+ lammps-20131201.ebuild:
+ remove elog message
+
13 Dec 2013; Nicolas Bock <nicolasbock@gentoo.org> metadata.xml:
sci-physics/lammps: updated maintainer email to gentoo.org
diff --git a/sci-physics/lammps/lammps-20130816.ebuild b/sci-physics/lammps/lammps-20130816.ebuild
index fa960e3..93a69ed 100644
--- a/sci-physics/lammps/lammps-20130816.ebuild
+++ b/sci-physics/lammps/lammps-20130816.ebuild
@@ -102,7 +102,6 @@ src_install() {
if use examples; then
local LAMMPS_EXAMPLES="/usr/share/${PF}/examples"
- elog "The examples can be found in ${LAMMPS_EXAMPLES}"
insinto "${LAMMPS_EXAMPLES}"
doins -r examples/*
fi
diff --git a/sci-physics/lammps/lammps-20130830.ebuild b/sci-physics/lammps/lammps-20130830.ebuild
index fa960e3..93a69ed 100644
--- a/sci-physics/lammps/lammps-20130830.ebuild
+++ b/sci-physics/lammps/lammps-20130830.ebuild
@@ -102,7 +102,6 @@ src_install() {
if use examples; then
local LAMMPS_EXAMPLES="/usr/share/${PF}/examples"
- elog "The examples can be found in ${LAMMPS_EXAMPLES}"
insinto "${LAMMPS_EXAMPLES}"
doins -r examples/*
fi
diff --git a/sci-physics/lammps/lammps-20130917.ebuild b/sci-physics/lammps/lammps-20130917.ebuild
index fa960e3..93a69ed 100644
--- a/sci-physics/lammps/lammps-20130917.ebuild
+++ b/sci-physics/lammps/lammps-20130917.ebuild
@@ -102,7 +102,6 @@ src_install() {
if use examples; then
local LAMMPS_EXAMPLES="/usr/share/${PF}/examples"
- elog "The examples can be found in ${LAMMPS_EXAMPLES}"
insinto "${LAMMPS_EXAMPLES}"
doins -r examples/*
fi
diff --git a/sci-physics/lammps/lammps-20130923.ebuild b/sci-physics/lammps/lammps-20130923.ebuild
index fa960e3..93a69ed 100644
--- a/sci-physics/lammps/lammps-20130923.ebuild
+++ b/sci-physics/lammps/lammps-20130923.ebuild
@@ -102,7 +102,6 @@ src_install() {
if use examples; then
local LAMMPS_EXAMPLES="/usr/share/${PF}/examples"
- elog "The examples can be found in ${LAMMPS_EXAMPLES}"
insinto "${LAMMPS_EXAMPLES}"
doins -r examples/*
fi
diff --git a/sci-physics/lammps/lammps-20130930.ebuild b/sci-physics/lammps/lammps-20130930.ebuild
index 9ef5cdd..fe4c7ad 100644
--- a/sci-physics/lammps/lammps-20130930.ebuild
+++ b/sci-physics/lammps/lammps-20130930.ebuild
@@ -102,7 +102,6 @@ src_install() {
if use examples; then
local LAMMPS_EXAMPLES="/usr/share/${PF}/examples"
- elog "The examples can be found in ${LAMMPS_EXAMPLES}"
insinto "${LAMMPS_EXAMPLES}"
doins -r examples/*
fi
diff --git a/sci-physics/lammps/lammps-20131111.ebuild b/sci-physics/lammps/lammps-20131111.ebuild
index 9ef5cdd..fe4c7ad 100644
--- a/sci-physics/lammps/lammps-20131111.ebuild
+++ b/sci-physics/lammps/lammps-20131111.ebuild
@@ -102,7 +102,6 @@ src_install() {
if use examples; then
local LAMMPS_EXAMPLES="/usr/share/${PF}/examples"
- elog "The examples can be found in ${LAMMPS_EXAMPLES}"
insinto "${LAMMPS_EXAMPLES}"
doins -r examples/*
fi
diff --git a/sci-physics/lammps/lammps-20131123.ebuild b/sci-physics/lammps/lammps-20131123.ebuild
index 9ef5cdd..fe4c7ad 100644
--- a/sci-physics/lammps/lammps-20131123.ebuild
+++ b/sci-physics/lammps/lammps-20131123.ebuild
@@ -102,7 +102,6 @@ src_install() {
if use examples; then
local LAMMPS_EXAMPLES="/usr/share/${PF}/examples"
- elog "The examples can be found in ${LAMMPS_EXAMPLES}"
insinto "${LAMMPS_EXAMPLES}"
doins -r examples/*
fi
diff --git a/sci-physics/lammps/lammps-20131201.ebuild b/sci-physics/lammps/lammps-20131201.ebuild
index 9ef5cdd..fe4c7ad 100644
--- a/sci-physics/lammps/lammps-20131201.ebuild
+++ b/sci-physics/lammps/lammps-20131201.ebuild
@@ -102,7 +102,6 @@ src_install() {
if use examples; then
local LAMMPS_EXAMPLES="/usr/share/${PF}/examples"
- elog "The examples can be found in ${LAMMPS_EXAMPLES}"
insinto "${LAMMPS_EXAMPLES}"
doins -r examples/*
fi
^ permalink raw reply related [flat|nested] 34+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-physics/lammps/
@ 2013-12-29 0:31 Justin Lecher
0 siblings, 0 replies; 34+ messages in thread
From: Justin Lecher @ 2013-12-29 0:31 UTC (permalink / raw
To: gentoo-commits
commit: f22d15b68f957f56234b30a20e8a77b74cc5a40a
Author: Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Sat Dec 28 23:52:44 2013 +0000
Commit: Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Sat Dec 28 23:52:44 2013 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=f22d15b6
More up to date version in tree
Signed-off-by: Justin Lecher <jlec <AT> gentoo.org>
---
sci-physics/lammps/ChangeLog | 77 --------------------
sci-physics/lammps/lammps-20130816.ebuild | 114 ------------------------------
sci-physics/lammps/lammps-20130830.ebuild | 114 ------------------------------
sci-physics/lammps/lammps-20130917.ebuild | 114 ------------------------------
sci-physics/lammps/lammps-20130923.ebuild | 114 ------------------------------
sci-physics/lammps/lammps-20130930.ebuild | 114 ------------------------------
sci-physics/lammps/lammps-20131111.ebuild | 114 ------------------------------
sci-physics/lammps/lammps-20131123.ebuild | 114 ------------------------------
sci-physics/lammps/lammps-20131201.ebuild | 114 ------------------------------
sci-physics/lammps/metadata.xml | 31 --------
10 files changed, 1020 deletions(-)
diff --git a/sci-physics/lammps/ChangeLog b/sci-physics/lammps/ChangeLog
deleted file mode 100644
index 76ef3a9..0000000
--- a/sci-physics/lammps/ChangeLog
+++ /dev/null
@@ -1,77 +0,0 @@
-# ChangeLog for sci-physics/lammps
-# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
-# $Header: $
-
- 22 Dec 2013; Christoph Junghans <ottxor@gentoo.org> lammps-20130816.ebuild,
- lammps-20130830.ebuild, lammps-20130917.ebuild, lammps-20130923.ebuild,
- lammps-20130930.ebuild, lammps-20131111.ebuild, lammps-20131123.ebuild,
- lammps-20131201.ebuild:
- remove elog message
-
- 13 Dec 2013; Nicolas Bock <nicolasbock@gentoo.org> metadata.xml:
- sci-physics/lammps: updated maintainer email to gentoo.org
-
-*lammps-20131201 (04 Dec 2013)
-
- 04 Dec 2013; Nicolas Bock <nicolasbock@gmail.com> +lammps-20131201.ebuild:
- sci-physics/lammps: Version bump to 20121201.
-
-*lammps-20131123 (22 Nov 2013)
-
- 22 Nov 2013; Nicolas Bock <nicolasbock@gmail.com> +lammps-20131123.ebuild:
- sci-physics/lammps-20131123: Version bump.
-
-*lammps-20131111 (11 Nov 2013)
-
- 11 Nov 2013; Nicolas Bock <nicolasbock@gmail.com> +lammps-20131111.ebuild:
- sci-physics/lammps-20131111: Version bump.
-
-*lammps-20130930 (16 Oct 2013)
-
- 16 Oct 2013; Nicolas Bock <nicolasbock@gmail.com> +lammps-20130930.ebuild:
- sci-physics/lammps-20130930: Version bump.
-
-*lammps-20130923 (27 Sep 2013)
-
- 27 Sep 2013; Nicolas Bock <nicolasbock@gmail.com> +lammps-20130923.ebuild,
- -lammps-20130701.ebuild, -lammps-20130708.ebuild, -lammps-20130711.ebuild:
- sci-physics/lammps-20130923: Version bump. I also removed older versions to
- clean up a bit.
-
-*lammps-20130917 (18 Sep 2013)
-
- 18 Sep 2013; Nicolas Bock <nicolasbock@gmail.com> +lammps-20130917.ebuild:
- sci-physics/lammps-20130917: Version bump.
-
-*lammps-20130830 (02 Sep 2013)
-
- 02 Sep 2013; Nicolas Bock <nicolasbock@gmail.com> +lammps-20130830.ebuild:
- sci-physics/lammps: Version bump to 20130830.
-
-*lammps-20130816 (13 Aug 2013)
-
- 13 Aug 2013; Nicolas Bock <nicolasbock@gmail.com> +lammps-20130816.ebuild:
- sci-physics/lammps-20130816: Version bump.
-
-*lammps-20130711 (16 Jul 2013)
-
- 16 Jul 2013; Nicolas Bock <nicolasbock@gmail.com> +lammps-20130711.ebuild:
- Version bump to sci-physics/lammps-20130711
-
- 09 Jul 2013; Nicolas Bock <nicolasbock@gmail.com> lammps-20130708.ebuild:
- sci-physics/lammps: Fixed repoman warning.
-
-*lammps-20130708 (09 Jul 2013)
-
- 09 Jul 2013; Nicolas Bock <nicolasbock@gmail.com> +lammps-20130708.ebuild:
- Added current version: sci-physics/lammps-20130708. * Fixed bug in lammps to
- gentoo version string conversion. In bash arithmetic operations, a string
- literal with a leading "0" is interpreted in base 8. * Added potentials, which
- were not installed in previous versions. * Moved examples from
- /usr/share/doc/${PF} to /usr/share/lammps-${PF}.
-
-*lammps-20130701 (03 Jul 2013)
-
- 03 Jul 2013; Nicolas Bock <nicolasbock@gmail.com> +lammps-20130701.ebuild,
- +metadata.xml:
- Version bump to 1-Jul-2013.
diff --git a/sci-physics/lammps/lammps-20130816.ebuild b/sci-physics/lammps/lammps-20130816.ebuild
deleted file mode 100644
index 93a69ed..0000000
--- a/sci-physics/lammps/lammps-20130816.ebuild
+++ /dev/null
@@ -1,114 +0,0 @@
-# Copyright 1999-2013 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-physics/lammps/lammps-20130526.ebuild,v 1.1 2013/06/26 23:53:11 ottxor Exp $
-
-EAPI=5
-
-FORTRAN_NEEDED="package-meam"
-
-inherit eutils fortran-2
-
-convert_month() {
- case $1 in
- 01) echo Jan
- ;;
- 02) echo Feb
- ;;
- 03) echo Mar
- ;;
- 04) echo Apr
- ;;
- 05) echo May
- ;;
- 06) echo Jun
- ;;
- 07) echo Jul
- ;;
- 08) echo Aug
- ;;
- 09) echo Sep
- ;;
- 10) echo Oct
- ;;
- 11) echo Nov
- ;;
- 12) echo Dec
- ;;
- *) echo unknown
- ;;
- esac
-}
-
-MY_P=${PN}-$((10#${PV:6:2}))$(convert_month ${PV:4:2})${PV:2:2}
-
-DESCRIPTION="Large-scale Atomic/Molecular Massively Parallel Simulator"
-HOMEPAGE="http://lammps.sandia.gov/"
-SRC_URI="http://lammps.sandia.gov/tars/${MY_P}.tar.gz"
-
-LICENSE="GPL-2"
-SLOT="0"
-KEYWORDS="~amd64"
-IUSE="doc examples gzip lammps-memalign mpi package-dipole package-meam package-rigid"
-
-DEPEND="mpi? ( virtual/mpi )"
-RDEPEND="${DEPEND}"
-
-S="${WORKDIR}/${MY_P}"
-
-lmp_emake() {
- local LAMMPS_INCLUDEFLAGS="$(usex gzip '-DLAMMPS_GZIP' '')"
- LAMMPS_INCLUDEFLAGS+="$(usex lammps-memalign ' -DLAMMPS_MEMALIGN' '')"
-
- # Note: The lammps makefile uses CC to indicate the C++ compiler.
- emake \
- ARCHIVE=$(tc-getAR) \
- CC=$(usex mpi "mpic++" "$(tc-getCXX)") \
- F90=$(usex mpi "mpif90" "$(tc-getFC)") \
- LINK=$(usex mpi "mpic++" "$(tc-getCXX)") \
- CCFLAGS="${CXXFLAGS}" \
- F90FLAGS="${FCFLAGS}" \
- LINKFLAGS="${LDFLAGS}" \
- LMP_INC="${LAMMPS_INCLUDEFLAGS}" \
- MPI_INC=$(usex mpi '' "-I../STUBS") \
- MPI_PATH=$(usex mpi '' '-L../STUBS') \
- MPI_LIB=$(usex mpi '' '-lmpi_stubs') \
- "$@"
-}
-
-src_compile() {
- # Compile stubs for serial version.
- use mpi || lmp_emake -C src stubs
-
- # Build optional packages.
- if use package-meam; then
- lmp_emake -C src yes-meam
- lmp_emake -j1 -C lib/meam -f Makefile.gfortran
- fi
- use package-dipole && emake -C src yes-dipole
- use package-rigid && emake -C src yes-rigid
-
- # Compile.
- lmp_emake -C src serial
-}
-
-src_install() {
- newbin "src/lmp_serial" "lmp"
-
- local LAMMPS_POTENTIALS="/usr/share/${PF}/potentials"
- insinto "${LAMMPS_POTENTIALS}"
- doins potentials/*
- echo "LAMMPS_POTENTIALS=${LAMMPS_POTENTIALS}" > 99lammps
- doenvd 99lammps
-
- if use examples; then
- local LAMMPS_EXAMPLES="/usr/share/${PF}/examples"
- insinto "${LAMMPS_EXAMPLES}"
- doins -r examples/*
- fi
-
- dodoc README
- if use doc; then
- dodoc doc/Manual.pdf
- dohtml -r doc/*
- fi
-}
diff --git a/sci-physics/lammps/lammps-20130830.ebuild b/sci-physics/lammps/lammps-20130830.ebuild
deleted file mode 100644
index 93a69ed..0000000
--- a/sci-physics/lammps/lammps-20130830.ebuild
+++ /dev/null
@@ -1,114 +0,0 @@
-# Copyright 1999-2013 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-physics/lammps/lammps-20130526.ebuild,v 1.1 2013/06/26 23:53:11 ottxor Exp $
-
-EAPI=5
-
-FORTRAN_NEEDED="package-meam"
-
-inherit eutils fortran-2
-
-convert_month() {
- case $1 in
- 01) echo Jan
- ;;
- 02) echo Feb
- ;;
- 03) echo Mar
- ;;
- 04) echo Apr
- ;;
- 05) echo May
- ;;
- 06) echo Jun
- ;;
- 07) echo Jul
- ;;
- 08) echo Aug
- ;;
- 09) echo Sep
- ;;
- 10) echo Oct
- ;;
- 11) echo Nov
- ;;
- 12) echo Dec
- ;;
- *) echo unknown
- ;;
- esac
-}
-
-MY_P=${PN}-$((10#${PV:6:2}))$(convert_month ${PV:4:2})${PV:2:2}
-
-DESCRIPTION="Large-scale Atomic/Molecular Massively Parallel Simulator"
-HOMEPAGE="http://lammps.sandia.gov/"
-SRC_URI="http://lammps.sandia.gov/tars/${MY_P}.tar.gz"
-
-LICENSE="GPL-2"
-SLOT="0"
-KEYWORDS="~amd64"
-IUSE="doc examples gzip lammps-memalign mpi package-dipole package-meam package-rigid"
-
-DEPEND="mpi? ( virtual/mpi )"
-RDEPEND="${DEPEND}"
-
-S="${WORKDIR}/${MY_P}"
-
-lmp_emake() {
- local LAMMPS_INCLUDEFLAGS="$(usex gzip '-DLAMMPS_GZIP' '')"
- LAMMPS_INCLUDEFLAGS+="$(usex lammps-memalign ' -DLAMMPS_MEMALIGN' '')"
-
- # Note: The lammps makefile uses CC to indicate the C++ compiler.
- emake \
- ARCHIVE=$(tc-getAR) \
- CC=$(usex mpi "mpic++" "$(tc-getCXX)") \
- F90=$(usex mpi "mpif90" "$(tc-getFC)") \
- LINK=$(usex mpi "mpic++" "$(tc-getCXX)") \
- CCFLAGS="${CXXFLAGS}" \
- F90FLAGS="${FCFLAGS}" \
- LINKFLAGS="${LDFLAGS}" \
- LMP_INC="${LAMMPS_INCLUDEFLAGS}" \
- MPI_INC=$(usex mpi '' "-I../STUBS") \
- MPI_PATH=$(usex mpi '' '-L../STUBS') \
- MPI_LIB=$(usex mpi '' '-lmpi_stubs') \
- "$@"
-}
-
-src_compile() {
- # Compile stubs for serial version.
- use mpi || lmp_emake -C src stubs
-
- # Build optional packages.
- if use package-meam; then
- lmp_emake -C src yes-meam
- lmp_emake -j1 -C lib/meam -f Makefile.gfortran
- fi
- use package-dipole && emake -C src yes-dipole
- use package-rigid && emake -C src yes-rigid
-
- # Compile.
- lmp_emake -C src serial
-}
-
-src_install() {
- newbin "src/lmp_serial" "lmp"
-
- local LAMMPS_POTENTIALS="/usr/share/${PF}/potentials"
- insinto "${LAMMPS_POTENTIALS}"
- doins potentials/*
- echo "LAMMPS_POTENTIALS=${LAMMPS_POTENTIALS}" > 99lammps
- doenvd 99lammps
-
- if use examples; then
- local LAMMPS_EXAMPLES="/usr/share/${PF}/examples"
- insinto "${LAMMPS_EXAMPLES}"
- doins -r examples/*
- fi
-
- dodoc README
- if use doc; then
- dodoc doc/Manual.pdf
- dohtml -r doc/*
- fi
-}
diff --git a/sci-physics/lammps/lammps-20130917.ebuild b/sci-physics/lammps/lammps-20130917.ebuild
deleted file mode 100644
index 93a69ed..0000000
--- a/sci-physics/lammps/lammps-20130917.ebuild
+++ /dev/null
@@ -1,114 +0,0 @@
-# Copyright 1999-2013 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-physics/lammps/lammps-20130526.ebuild,v 1.1 2013/06/26 23:53:11 ottxor Exp $
-
-EAPI=5
-
-FORTRAN_NEEDED="package-meam"
-
-inherit eutils fortran-2
-
-convert_month() {
- case $1 in
- 01) echo Jan
- ;;
- 02) echo Feb
- ;;
- 03) echo Mar
- ;;
- 04) echo Apr
- ;;
- 05) echo May
- ;;
- 06) echo Jun
- ;;
- 07) echo Jul
- ;;
- 08) echo Aug
- ;;
- 09) echo Sep
- ;;
- 10) echo Oct
- ;;
- 11) echo Nov
- ;;
- 12) echo Dec
- ;;
- *) echo unknown
- ;;
- esac
-}
-
-MY_P=${PN}-$((10#${PV:6:2}))$(convert_month ${PV:4:2})${PV:2:2}
-
-DESCRIPTION="Large-scale Atomic/Molecular Massively Parallel Simulator"
-HOMEPAGE="http://lammps.sandia.gov/"
-SRC_URI="http://lammps.sandia.gov/tars/${MY_P}.tar.gz"
-
-LICENSE="GPL-2"
-SLOT="0"
-KEYWORDS="~amd64"
-IUSE="doc examples gzip lammps-memalign mpi package-dipole package-meam package-rigid"
-
-DEPEND="mpi? ( virtual/mpi )"
-RDEPEND="${DEPEND}"
-
-S="${WORKDIR}/${MY_P}"
-
-lmp_emake() {
- local LAMMPS_INCLUDEFLAGS="$(usex gzip '-DLAMMPS_GZIP' '')"
- LAMMPS_INCLUDEFLAGS+="$(usex lammps-memalign ' -DLAMMPS_MEMALIGN' '')"
-
- # Note: The lammps makefile uses CC to indicate the C++ compiler.
- emake \
- ARCHIVE=$(tc-getAR) \
- CC=$(usex mpi "mpic++" "$(tc-getCXX)") \
- F90=$(usex mpi "mpif90" "$(tc-getFC)") \
- LINK=$(usex mpi "mpic++" "$(tc-getCXX)") \
- CCFLAGS="${CXXFLAGS}" \
- F90FLAGS="${FCFLAGS}" \
- LINKFLAGS="${LDFLAGS}" \
- LMP_INC="${LAMMPS_INCLUDEFLAGS}" \
- MPI_INC=$(usex mpi '' "-I../STUBS") \
- MPI_PATH=$(usex mpi '' '-L../STUBS') \
- MPI_LIB=$(usex mpi '' '-lmpi_stubs') \
- "$@"
-}
-
-src_compile() {
- # Compile stubs for serial version.
- use mpi || lmp_emake -C src stubs
-
- # Build optional packages.
- if use package-meam; then
- lmp_emake -C src yes-meam
- lmp_emake -j1 -C lib/meam -f Makefile.gfortran
- fi
- use package-dipole && emake -C src yes-dipole
- use package-rigid && emake -C src yes-rigid
-
- # Compile.
- lmp_emake -C src serial
-}
-
-src_install() {
- newbin "src/lmp_serial" "lmp"
-
- local LAMMPS_POTENTIALS="/usr/share/${PF}/potentials"
- insinto "${LAMMPS_POTENTIALS}"
- doins potentials/*
- echo "LAMMPS_POTENTIALS=${LAMMPS_POTENTIALS}" > 99lammps
- doenvd 99lammps
-
- if use examples; then
- local LAMMPS_EXAMPLES="/usr/share/${PF}/examples"
- insinto "${LAMMPS_EXAMPLES}"
- doins -r examples/*
- fi
-
- dodoc README
- if use doc; then
- dodoc doc/Manual.pdf
- dohtml -r doc/*
- fi
-}
diff --git a/sci-physics/lammps/lammps-20130923.ebuild b/sci-physics/lammps/lammps-20130923.ebuild
deleted file mode 100644
index 93a69ed..0000000
--- a/sci-physics/lammps/lammps-20130923.ebuild
+++ /dev/null
@@ -1,114 +0,0 @@
-# Copyright 1999-2013 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-physics/lammps/lammps-20130526.ebuild,v 1.1 2013/06/26 23:53:11 ottxor Exp $
-
-EAPI=5
-
-FORTRAN_NEEDED="package-meam"
-
-inherit eutils fortran-2
-
-convert_month() {
- case $1 in
- 01) echo Jan
- ;;
- 02) echo Feb
- ;;
- 03) echo Mar
- ;;
- 04) echo Apr
- ;;
- 05) echo May
- ;;
- 06) echo Jun
- ;;
- 07) echo Jul
- ;;
- 08) echo Aug
- ;;
- 09) echo Sep
- ;;
- 10) echo Oct
- ;;
- 11) echo Nov
- ;;
- 12) echo Dec
- ;;
- *) echo unknown
- ;;
- esac
-}
-
-MY_P=${PN}-$((10#${PV:6:2}))$(convert_month ${PV:4:2})${PV:2:2}
-
-DESCRIPTION="Large-scale Atomic/Molecular Massively Parallel Simulator"
-HOMEPAGE="http://lammps.sandia.gov/"
-SRC_URI="http://lammps.sandia.gov/tars/${MY_P}.tar.gz"
-
-LICENSE="GPL-2"
-SLOT="0"
-KEYWORDS="~amd64"
-IUSE="doc examples gzip lammps-memalign mpi package-dipole package-meam package-rigid"
-
-DEPEND="mpi? ( virtual/mpi )"
-RDEPEND="${DEPEND}"
-
-S="${WORKDIR}/${MY_P}"
-
-lmp_emake() {
- local LAMMPS_INCLUDEFLAGS="$(usex gzip '-DLAMMPS_GZIP' '')"
- LAMMPS_INCLUDEFLAGS+="$(usex lammps-memalign ' -DLAMMPS_MEMALIGN' '')"
-
- # Note: The lammps makefile uses CC to indicate the C++ compiler.
- emake \
- ARCHIVE=$(tc-getAR) \
- CC=$(usex mpi "mpic++" "$(tc-getCXX)") \
- F90=$(usex mpi "mpif90" "$(tc-getFC)") \
- LINK=$(usex mpi "mpic++" "$(tc-getCXX)") \
- CCFLAGS="${CXXFLAGS}" \
- F90FLAGS="${FCFLAGS}" \
- LINKFLAGS="${LDFLAGS}" \
- LMP_INC="${LAMMPS_INCLUDEFLAGS}" \
- MPI_INC=$(usex mpi '' "-I../STUBS") \
- MPI_PATH=$(usex mpi '' '-L../STUBS') \
- MPI_LIB=$(usex mpi '' '-lmpi_stubs') \
- "$@"
-}
-
-src_compile() {
- # Compile stubs for serial version.
- use mpi || lmp_emake -C src stubs
-
- # Build optional packages.
- if use package-meam; then
- lmp_emake -C src yes-meam
- lmp_emake -j1 -C lib/meam -f Makefile.gfortran
- fi
- use package-dipole && emake -C src yes-dipole
- use package-rigid && emake -C src yes-rigid
-
- # Compile.
- lmp_emake -C src serial
-}
-
-src_install() {
- newbin "src/lmp_serial" "lmp"
-
- local LAMMPS_POTENTIALS="/usr/share/${PF}/potentials"
- insinto "${LAMMPS_POTENTIALS}"
- doins potentials/*
- echo "LAMMPS_POTENTIALS=${LAMMPS_POTENTIALS}" > 99lammps
- doenvd 99lammps
-
- if use examples; then
- local LAMMPS_EXAMPLES="/usr/share/${PF}/examples"
- insinto "${LAMMPS_EXAMPLES}"
- doins -r examples/*
- fi
-
- dodoc README
- if use doc; then
- dodoc doc/Manual.pdf
- dohtml -r doc/*
- fi
-}
diff --git a/sci-physics/lammps/lammps-20130930.ebuild b/sci-physics/lammps/lammps-20130930.ebuild
deleted file mode 100644
index fe4c7ad..0000000
--- a/sci-physics/lammps/lammps-20130930.ebuild
+++ /dev/null
@@ -1,114 +0,0 @@
-# Copyright 1999-2013 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-physics/lammps/lammps-20130526.ebuild,v 1.1 2013/06/26 23:53:11 ottxor Exp $
-
-EAPI=5
-
-FORTRAN_NEEDED="package-meam"
-
-inherit eutils fortran-2
-
-convert_month() {
- case $1 in
- 01) echo Jan
- ;;
- 02) echo Feb
- ;;
- 03) echo Mar
- ;;
- 04) echo Apr
- ;;
- 05) echo May
- ;;
- 06) echo Jun
- ;;
- 07) echo Jul
- ;;
- 08) echo Aug
- ;;
- 09) echo Sep
- ;;
- 10) echo Oct
- ;;
- 11) echo Nov
- ;;
- 12) echo Dec
- ;;
- *) echo unknown
- ;;
- esac
-}
-
-MY_P=${PN}-$((10#${PV:6:2}))$(convert_month ${PV:4:2})${PV:2:2}
-
-DESCRIPTION="Large-scale Atomic/Molecular Massively Parallel Simulator"
-HOMEPAGE="http://lammps.sandia.gov/"
-SRC_URI="http://lammps.sandia.gov/tars/${MY_P}.tar.gz"
-
-LICENSE="GPL-2"
-SLOT="0"
-KEYWORDS="~amd64"
-IUSE="doc examples gzip lammps-memalign mpi package-dipole package-meam package-rigid"
-
-DEPEND="mpi? ( virtual/mpi )"
-RDEPEND="${DEPEND}"
-
-S="${WORKDIR}/${MY_P}"
-
-lmp_emake() {
- local LAMMPS_INCLUDEFLAGS="$(usex gzip '-DLAMMPS_GZIP' '')"
- LAMMPS_INCLUDEFLAGS+="$(usex lammps-memalign ' -DLAMMPS_MEMALIGN' '')"
-
- # Note: The lammps makefile uses CC to indicate the C++ compiler.
- emake \
- ARCHIVE=$(tc-getAR) \
- CC=$(usex mpi "mpic++" "$(tc-getCXX)") \
- F90=$(usex mpi "mpif90" "$(tc-getFC)") \
- LINK=$(usex mpi "mpic++" "$(tc-getCXX)") \
- CCFLAGS="${CXXFLAGS}" \
- F90FLAGS="${FCFLAGS}" \
- LINKFLAGS="${LDFLAGS}" \
- LMP_INC="${LAMMPS_INCLUDEFLAGS}" \
- MPI_INC=$(usex mpi '' "-I../STUBS") \
- MPI_PATH=$(usex mpi '' '-L../STUBS') \
- MPI_LIB=$(usex mpi '' '-lmpi_stubs') \
- "$@"
-}
-
-src_compile() {
- # Compile stubs for serial version.
- use mpi || lmp_emake -C src stubs
-
- # Build optional packages.
- if use package-meam; then
- lmp_emake -C src yes-meam
- lmp_emake -j1 -C lib/meam -f Makefile.gfortran
- fi
- use package-dipole && emake -C src yes-dipole
- use package-rigid && emake -C src yes-rigid
-
- # Compile.
- lmp_emake -C src serial
-}
-
-src_install() {
- newbin "src/lmp_serial" "lmp"
-
- local LAMMPS_POTENTIALS="/usr/share/${PF}/potentials"
- insinto "${LAMMPS_POTENTIALS}"
- doins potentials/*
- echo "LAMMPS_POTENTIALS=${LAMMPS_POTENTIALS}" > 99lammps
- doenvd 99lammps
-
- if use examples; then
- local LAMMPS_EXAMPLES="/usr/share/${PF}/examples"
- insinto "${LAMMPS_EXAMPLES}"
- doins -r examples/*
- fi
-
- dodoc README
- if use doc; then
- dodoc doc/Manual.pdf
- dohtml -r doc/*
- fi
-}
diff --git a/sci-physics/lammps/lammps-20131111.ebuild b/sci-physics/lammps/lammps-20131111.ebuild
deleted file mode 100644
index fe4c7ad..0000000
--- a/sci-physics/lammps/lammps-20131111.ebuild
+++ /dev/null
@@ -1,114 +0,0 @@
-# Copyright 1999-2013 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-physics/lammps/lammps-20130526.ebuild,v 1.1 2013/06/26 23:53:11 ottxor Exp $
-
-EAPI=5
-
-FORTRAN_NEEDED="package-meam"
-
-inherit eutils fortran-2
-
-convert_month() {
- case $1 in
- 01) echo Jan
- ;;
- 02) echo Feb
- ;;
- 03) echo Mar
- ;;
- 04) echo Apr
- ;;
- 05) echo May
- ;;
- 06) echo Jun
- ;;
- 07) echo Jul
- ;;
- 08) echo Aug
- ;;
- 09) echo Sep
- ;;
- 10) echo Oct
- ;;
- 11) echo Nov
- ;;
- 12) echo Dec
- ;;
- *) echo unknown
- ;;
- esac
-}
-
-MY_P=${PN}-$((10#${PV:6:2}))$(convert_month ${PV:4:2})${PV:2:2}
-
-DESCRIPTION="Large-scale Atomic/Molecular Massively Parallel Simulator"
-HOMEPAGE="http://lammps.sandia.gov/"
-SRC_URI="http://lammps.sandia.gov/tars/${MY_P}.tar.gz"
-
-LICENSE="GPL-2"
-SLOT="0"
-KEYWORDS="~amd64"
-IUSE="doc examples gzip lammps-memalign mpi package-dipole package-meam package-rigid"
-
-DEPEND="mpi? ( virtual/mpi )"
-RDEPEND="${DEPEND}"
-
-S="${WORKDIR}/${MY_P}"
-
-lmp_emake() {
- local LAMMPS_INCLUDEFLAGS="$(usex gzip '-DLAMMPS_GZIP' '')"
- LAMMPS_INCLUDEFLAGS+="$(usex lammps-memalign ' -DLAMMPS_MEMALIGN' '')"
-
- # Note: The lammps makefile uses CC to indicate the C++ compiler.
- emake \
- ARCHIVE=$(tc-getAR) \
- CC=$(usex mpi "mpic++" "$(tc-getCXX)") \
- F90=$(usex mpi "mpif90" "$(tc-getFC)") \
- LINK=$(usex mpi "mpic++" "$(tc-getCXX)") \
- CCFLAGS="${CXXFLAGS}" \
- F90FLAGS="${FCFLAGS}" \
- LINKFLAGS="${LDFLAGS}" \
- LMP_INC="${LAMMPS_INCLUDEFLAGS}" \
- MPI_INC=$(usex mpi '' "-I../STUBS") \
- MPI_PATH=$(usex mpi '' '-L../STUBS') \
- MPI_LIB=$(usex mpi '' '-lmpi_stubs') \
- "$@"
-}
-
-src_compile() {
- # Compile stubs for serial version.
- use mpi || lmp_emake -C src stubs
-
- # Build optional packages.
- if use package-meam; then
- lmp_emake -C src yes-meam
- lmp_emake -j1 -C lib/meam -f Makefile.gfortran
- fi
- use package-dipole && emake -C src yes-dipole
- use package-rigid && emake -C src yes-rigid
-
- # Compile.
- lmp_emake -C src serial
-}
-
-src_install() {
- newbin "src/lmp_serial" "lmp"
-
- local LAMMPS_POTENTIALS="/usr/share/${PF}/potentials"
- insinto "${LAMMPS_POTENTIALS}"
- doins potentials/*
- echo "LAMMPS_POTENTIALS=${LAMMPS_POTENTIALS}" > 99lammps
- doenvd 99lammps
-
- if use examples; then
- local LAMMPS_EXAMPLES="/usr/share/${PF}/examples"
- insinto "${LAMMPS_EXAMPLES}"
- doins -r examples/*
- fi
-
- dodoc README
- if use doc; then
- dodoc doc/Manual.pdf
- dohtml -r doc/*
- fi
-}
diff --git a/sci-physics/lammps/lammps-20131123.ebuild b/sci-physics/lammps/lammps-20131123.ebuild
deleted file mode 100644
index fe4c7ad..0000000
--- a/sci-physics/lammps/lammps-20131123.ebuild
+++ /dev/null
@@ -1,114 +0,0 @@
-# Copyright 1999-2013 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-physics/lammps/lammps-20130526.ebuild,v 1.1 2013/06/26 23:53:11 ottxor Exp $
-
-EAPI=5
-
-FORTRAN_NEEDED="package-meam"
-
-inherit eutils fortran-2
-
-convert_month() {
- case $1 in
- 01) echo Jan
- ;;
- 02) echo Feb
- ;;
- 03) echo Mar
- ;;
- 04) echo Apr
- ;;
- 05) echo May
- ;;
- 06) echo Jun
- ;;
- 07) echo Jul
- ;;
- 08) echo Aug
- ;;
- 09) echo Sep
- ;;
- 10) echo Oct
- ;;
- 11) echo Nov
- ;;
- 12) echo Dec
- ;;
- *) echo unknown
- ;;
- esac
-}
-
-MY_P=${PN}-$((10#${PV:6:2}))$(convert_month ${PV:4:2})${PV:2:2}
-
-DESCRIPTION="Large-scale Atomic/Molecular Massively Parallel Simulator"
-HOMEPAGE="http://lammps.sandia.gov/"
-SRC_URI="http://lammps.sandia.gov/tars/${MY_P}.tar.gz"
-
-LICENSE="GPL-2"
-SLOT="0"
-KEYWORDS="~amd64"
-IUSE="doc examples gzip lammps-memalign mpi package-dipole package-meam package-rigid"
-
-DEPEND="mpi? ( virtual/mpi )"
-RDEPEND="${DEPEND}"
-
-S="${WORKDIR}/${MY_P}"
-
-lmp_emake() {
- local LAMMPS_INCLUDEFLAGS="$(usex gzip '-DLAMMPS_GZIP' '')"
- LAMMPS_INCLUDEFLAGS+="$(usex lammps-memalign ' -DLAMMPS_MEMALIGN' '')"
-
- # Note: The lammps makefile uses CC to indicate the C++ compiler.
- emake \
- ARCHIVE=$(tc-getAR) \
- CC=$(usex mpi "mpic++" "$(tc-getCXX)") \
- F90=$(usex mpi "mpif90" "$(tc-getFC)") \
- LINK=$(usex mpi "mpic++" "$(tc-getCXX)") \
- CCFLAGS="${CXXFLAGS}" \
- F90FLAGS="${FCFLAGS}" \
- LINKFLAGS="${LDFLAGS}" \
- LMP_INC="${LAMMPS_INCLUDEFLAGS}" \
- MPI_INC=$(usex mpi '' "-I../STUBS") \
- MPI_PATH=$(usex mpi '' '-L../STUBS') \
- MPI_LIB=$(usex mpi '' '-lmpi_stubs') \
- "$@"
-}
-
-src_compile() {
- # Compile stubs for serial version.
- use mpi || lmp_emake -C src stubs
-
- # Build optional packages.
- if use package-meam; then
- lmp_emake -C src yes-meam
- lmp_emake -j1 -C lib/meam -f Makefile.gfortran
- fi
- use package-dipole && emake -C src yes-dipole
- use package-rigid && emake -C src yes-rigid
-
- # Compile.
- lmp_emake -C src serial
-}
-
-src_install() {
- newbin "src/lmp_serial" "lmp"
-
- local LAMMPS_POTENTIALS="/usr/share/${PF}/potentials"
- insinto "${LAMMPS_POTENTIALS}"
- doins potentials/*
- echo "LAMMPS_POTENTIALS=${LAMMPS_POTENTIALS}" > 99lammps
- doenvd 99lammps
-
- if use examples; then
- local LAMMPS_EXAMPLES="/usr/share/${PF}/examples"
- insinto "${LAMMPS_EXAMPLES}"
- doins -r examples/*
- fi
-
- dodoc README
- if use doc; then
- dodoc doc/Manual.pdf
- dohtml -r doc/*
- fi
-}
diff --git a/sci-physics/lammps/lammps-20131201.ebuild b/sci-physics/lammps/lammps-20131201.ebuild
deleted file mode 100644
index fe4c7ad..0000000
--- a/sci-physics/lammps/lammps-20131201.ebuild
+++ /dev/null
@@ -1,114 +0,0 @@
-# Copyright 1999-2013 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-physics/lammps/lammps-20130526.ebuild,v 1.1 2013/06/26 23:53:11 ottxor Exp $
-
-EAPI=5
-
-FORTRAN_NEEDED="package-meam"
-
-inherit eutils fortran-2
-
-convert_month() {
- case $1 in
- 01) echo Jan
- ;;
- 02) echo Feb
- ;;
- 03) echo Mar
- ;;
- 04) echo Apr
- ;;
- 05) echo May
- ;;
- 06) echo Jun
- ;;
- 07) echo Jul
- ;;
- 08) echo Aug
- ;;
- 09) echo Sep
- ;;
- 10) echo Oct
- ;;
- 11) echo Nov
- ;;
- 12) echo Dec
- ;;
- *) echo unknown
- ;;
- esac
-}
-
-MY_P=${PN}-$((10#${PV:6:2}))$(convert_month ${PV:4:2})${PV:2:2}
-
-DESCRIPTION="Large-scale Atomic/Molecular Massively Parallel Simulator"
-HOMEPAGE="http://lammps.sandia.gov/"
-SRC_URI="http://lammps.sandia.gov/tars/${MY_P}.tar.gz"
-
-LICENSE="GPL-2"
-SLOT="0"
-KEYWORDS="~amd64"
-IUSE="doc examples gzip lammps-memalign mpi package-dipole package-meam package-rigid"
-
-DEPEND="mpi? ( virtual/mpi )"
-RDEPEND="${DEPEND}"
-
-S="${WORKDIR}/${MY_P}"
-
-lmp_emake() {
- local LAMMPS_INCLUDEFLAGS="$(usex gzip '-DLAMMPS_GZIP' '')"
- LAMMPS_INCLUDEFLAGS+="$(usex lammps-memalign ' -DLAMMPS_MEMALIGN' '')"
-
- # Note: The lammps makefile uses CC to indicate the C++ compiler.
- emake \
- ARCHIVE=$(tc-getAR) \
- CC=$(usex mpi "mpic++" "$(tc-getCXX)") \
- F90=$(usex mpi "mpif90" "$(tc-getFC)") \
- LINK=$(usex mpi "mpic++" "$(tc-getCXX)") \
- CCFLAGS="${CXXFLAGS}" \
- F90FLAGS="${FCFLAGS}" \
- LINKFLAGS="${LDFLAGS}" \
- LMP_INC="${LAMMPS_INCLUDEFLAGS}" \
- MPI_INC=$(usex mpi '' "-I../STUBS") \
- MPI_PATH=$(usex mpi '' '-L../STUBS') \
- MPI_LIB=$(usex mpi '' '-lmpi_stubs') \
- "$@"
-}
-
-src_compile() {
- # Compile stubs for serial version.
- use mpi || lmp_emake -C src stubs
-
- # Build optional packages.
- if use package-meam; then
- lmp_emake -C src yes-meam
- lmp_emake -j1 -C lib/meam -f Makefile.gfortran
- fi
- use package-dipole && emake -C src yes-dipole
- use package-rigid && emake -C src yes-rigid
-
- # Compile.
- lmp_emake -C src serial
-}
-
-src_install() {
- newbin "src/lmp_serial" "lmp"
-
- local LAMMPS_POTENTIALS="/usr/share/${PF}/potentials"
- insinto "${LAMMPS_POTENTIALS}"
- doins potentials/*
- echo "LAMMPS_POTENTIALS=${LAMMPS_POTENTIALS}" > 99lammps
- doenvd 99lammps
-
- if use examples; then
- local LAMMPS_EXAMPLES="/usr/share/${PF}/examples"
- insinto "${LAMMPS_EXAMPLES}"
- doins -r examples/*
- fi
-
- dodoc README
- if use doc; then
- dodoc doc/Manual.pdf
- dohtml -r doc/*
- fi
-}
diff --git a/sci-physics/lammps/metadata.xml b/sci-physics/lammps/metadata.xml
deleted file mode 100644
index 7a1dc94..0000000
--- a/sci-physics/lammps/metadata.xml
+++ /dev/null
@@ -1,31 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
- <longdescription lang="en">
- LAMMPS is a classical molecular dynamics code, and an acronym for
- Large-scale Atomic/Molecular Massively Parallel Simulator.
-
- LAMMPS has potentials for soft materials (biomolecules, polymers) and
- solid-state materials (metals, semiconductors) and coarse-grained or
- mesoscopic systems. It can be used to model atoms or, more generically,
- as a parallel particle simulator at the atomic, meso, or continuum
- scale.
-
- LAMMPS runs on single processors or in parallel using message-passing
- techniques and a spatial-decomposition of the simulation domain. The
- code is designed to be easy to modify or extend with new functionality.
- </longdescription>
- <use>
- <flag name="lammps-memalign">Enables the use of the posix_memalign()
- call instead of malloc() when large chunks or memory are allocated
- by LAMMPS</flag>
- <flag name="package-meam">modified EAM potential</flag>
- <flag name="package-dipole">point dipole particles</flag>
- <flag name="package-rigid">rigid bodies</flag>
- </use>
- <herd>sci-physics</herd>
- <maintainer>
- <email>nicolasbock@gentoo.org</email>
- </maintainer>
-</pkgmetadata>
-
^ permalink raw reply related [flat|nested] 34+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-physics/lammps/
@ 2014-02-01 23:05 Nicolas Bock
0 siblings, 0 replies; 34+ messages in thread
From: Nicolas Bock @ 2014-02-01 23:05 UTC (permalink / raw
To: gentoo-commits
commit: 42964d3e017f8448f79958d94118b5775e76b6ae
Author: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
AuthorDate: Sat Feb 1 23:04:13 2014 +0000
Commit: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
CommitDate: Sat Feb 1 23:04:13 2014 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=42964d3e
sci-physics/lammps: Upstream now releases a stable channel
I added Feb 1 2014 in the stable slot to indicate that upstream considers this
version more tested and stable than their normal frequent releases.
Package-Manager: portage-2.2.7
---
sci-physics/lammps/ChangeLog | 11 +++
sci-physics/lammps/lammps-20140201.ebuild | 114 ++++++++++++++++++++++++++++++
sci-physics/lammps/metadata.xml | 31 ++++++++
3 files changed, 156 insertions(+)
diff --git a/sci-physics/lammps/ChangeLog b/sci-physics/lammps/ChangeLog
new file mode 100644
index 0000000..c5700d3
--- /dev/null
+++ b/sci-physics/lammps/ChangeLog
@@ -0,0 +1,11 @@
+# ChangeLog for sci-physics/lammps
+# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
+# $Header: $
+
+*lammps-20140201 (01 Feb 2014)
+
+ 01 Feb 2014; Nicolas Bock <nicolasbock@gentoo.org> +lammps-20140201.ebuild,
+ +metadata.xml:
+ sci-physics/lammps: Upstream now releases a stable channel I added Feb 1 2014
+ in the stable slot to indicate that upstream considers this version more
+ tested and stable than their normal frequent releases.
diff --git a/sci-physics/lammps/lammps-20140201.ebuild b/sci-physics/lammps/lammps-20140201.ebuild
new file mode 100644
index 0000000..8c6e17b
--- /dev/null
+++ b/sci-physics/lammps/lammps-20140201.ebuild
@@ -0,0 +1,114 @@
+# Copyright 1999-2014 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-physics/lammps/lammps-20140129.ebuild,v 1.1 2014/01/27 18:20:39 nicolasbock Exp $
+
+EAPI=5
+
+FORTRAN_NEEDED="package-meam"
+
+inherit eutils fortran-2
+
+convert_month() {
+ case $1 in
+ 01) echo Jan
+ ;;
+ 02) echo Feb
+ ;;
+ 03) echo Mar
+ ;;
+ 04) echo Apr
+ ;;
+ 05) echo May
+ ;;
+ 06) echo Jun
+ ;;
+ 07) echo Jul
+ ;;
+ 08) echo Aug
+ ;;
+ 09) echo Sep
+ ;;
+ 10) echo Oct
+ ;;
+ 11) echo Nov
+ ;;
+ 12) echo Dec
+ ;;
+ *) echo unknown
+ ;;
+ esac
+}
+
+MY_P=${PN}-$((10#${PV:6:2}))$(convert_month ${PV:4:2})${PV:2:2}
+
+DESCRIPTION="Large-scale Atomic/Molecular Massively Parallel Simulator"
+HOMEPAGE="http://lammps.sandia.gov/"
+SRC_URI="http://lammps.sandia.gov/tars/${MY_P}.tar.gz"
+
+LICENSE="GPL-2"
+SLOT="stable"
+KEYWORDS="~amd64"
+IUSE="doc examples gzip lammps-memalign mpi package-dipole package-meam package-rigid"
+
+DEPEND="mpi? ( virtual/mpi )"
+RDEPEND="${DEPEND}"
+
+S="${WORKDIR}/${MY_P}"
+
+lmp_emake() {
+ local LAMMPS_INCLUDEFLAGS="$(usex gzip '-DLAMMPS_GZIP' '')"
+ LAMMPS_INCLUDEFLAGS+="$(usex lammps-memalign ' -DLAMMPS_MEMALIGN' '')"
+
+ # Note: The lammps makefile uses CC to indicate the C++ compiler.
+ emake \
+ ARCHIVE=$(tc-getAR) \
+ CC=$(usex mpi "mpic++" "$(tc-getCXX)") \
+ F90=$(usex mpi "mpif90" "$(tc-getFC)") \
+ LINK=$(usex mpi "mpic++" "$(tc-getCXX)") \
+ CCFLAGS="${CXXFLAGS}" \
+ F90FLAGS="${FCFLAGS}" \
+ LINKFLAGS="${LDFLAGS}" \
+ LMP_INC="${LAMMPS_INCLUDEFLAGS}" \
+ MPI_INC=$(usex mpi '' "-I../STUBS") \
+ MPI_PATH=$(usex mpi '' '-L../STUBS') \
+ MPI_LIB=$(usex mpi '' '-lmpi_stubs') \
+ "$@"
+}
+
+src_compile() {
+ # Compile stubs for serial version.
+ use mpi || lmp_emake -C src stubs
+
+ # Build optional packages.
+ if use package-meam; then
+ lmp_emake -C src yes-meam
+ lmp_emake -j1 -C lib/meam -f Makefile.gfortran
+ fi
+ use package-dipole && emake -C src yes-dipole
+ use package-rigid && emake -C src yes-rigid
+
+ # Compile.
+ lmp_emake -C src serial
+}
+
+src_install() {
+ newbin "src/lmp_serial" "lmp"
+
+ local LAMMPS_POTENTIALS="/usr/share/${PF}/potentials"
+ insinto "${LAMMPS_POTENTIALS}"
+ doins potentials/*
+ echo "LAMMPS_POTENTIALS=${LAMMPS_POTENTIALS}" > 99lammps
+ doenvd 99lammps
+
+ if use examples; then
+ local LAMMPS_EXAMPLES="/usr/share/${PF}/examples"
+ insinto "${LAMMPS_EXAMPLES}"
+ doins -r examples/*
+ fi
+
+ dodoc README
+ if use doc; then
+ dodoc doc/Manual.pdf
+ dohtml -r doc/*
+ fi
+}
diff --git a/sci-physics/lammps/metadata.xml b/sci-physics/lammps/metadata.xml
new file mode 100644
index 0000000..7a1dc94
--- /dev/null
+++ b/sci-physics/lammps/metadata.xml
@@ -0,0 +1,31 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+ <longdescription lang="en">
+ LAMMPS is a classical molecular dynamics code, and an acronym for
+ Large-scale Atomic/Molecular Massively Parallel Simulator.
+
+ LAMMPS has potentials for soft materials (biomolecules, polymers) and
+ solid-state materials (metals, semiconductors) and coarse-grained or
+ mesoscopic systems. It can be used to model atoms or, more generically,
+ as a parallel particle simulator at the atomic, meso, or continuum
+ scale.
+
+ LAMMPS runs on single processors or in parallel using message-passing
+ techniques and a spatial-decomposition of the simulation domain. The
+ code is designed to be easy to modify or extend with new functionality.
+ </longdescription>
+ <use>
+ <flag name="lammps-memalign">Enables the use of the posix_memalign()
+ call instead of malloc() when large chunks or memory are allocated
+ by LAMMPS</flag>
+ <flag name="package-meam">modified EAM potential</flag>
+ <flag name="package-dipole">point dipole particles</flag>
+ <flag name="package-rigid">rigid bodies</flag>
+ </use>
+ <herd>sci-physics</herd>
+ <maintainer>
+ <email>nicolasbock@gentoo.org</email>
+ </maintainer>
+</pkgmetadata>
+
^ permalink raw reply related [flat|nested] 34+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-physics/lammps/
@ 2014-02-05 4:36 Nicolas Bock
0 siblings, 0 replies; 34+ messages in thread
From: Nicolas Bock @ 2014-02-05 4:36 UTC (permalink / raw
To: gentoo-commits
commit: 9d7e73681526386b5c7ce095090fcc7707b476eb
Author: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
AuthorDate: Wed Feb 5 04:36:26 2014 +0000
Commit: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
CommitDate: Wed Feb 5 04:36:26 2014 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=9d7e7368
sci-physics/lammps: Added blocker for SLOT=0.
Package-Manager: portage-2.2.7
---
sci-physics/lammps/ChangeLog | 3 +++
sci-physics/lammps/lammps-20140201.ebuild | 5 ++++-
2 files changed, 7 insertions(+), 1 deletion(-)
diff --git a/sci-physics/lammps/ChangeLog b/sci-physics/lammps/ChangeLog
index c5700d3..469f665 100644
--- a/sci-physics/lammps/ChangeLog
+++ b/sci-physics/lammps/ChangeLog
@@ -2,6 +2,9 @@
# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+ 05 Feb 2014; Nicolas Bock <nicolasbock@gentoo.org> lammps-20140201.ebuild:
+ sci-physics/lammps: Added blocker for SLOT=0.
+
*lammps-20140201 (01 Feb 2014)
01 Feb 2014; Nicolas Bock <nicolasbock@gentoo.org> +lammps-20140201.ebuild,
diff --git a/sci-physics/lammps/lammps-20140201.ebuild b/sci-physics/lammps/lammps-20140201.ebuild
index 8c6e17b..ea1a0d9 100644
--- a/sci-physics/lammps/lammps-20140201.ebuild
+++ b/sci-physics/lammps/lammps-20140201.ebuild
@@ -51,7 +51,10 @@ KEYWORDS="~amd64"
IUSE="doc examples gzip lammps-memalign mpi package-dipole package-meam package-rigid"
DEPEND="mpi? ( virtual/mpi )"
-RDEPEND="${DEPEND}"
+RDEPEND="
+ ${DEPEND}
+ !${CATEGORY}/${PN}:0
+ "
S="${WORKDIR}/${MY_P}"
^ permalink raw reply related [flat|nested] 34+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-physics/lammps/
@ 2014-02-05 4:38 Nicolas Bock
0 siblings, 0 replies; 34+ messages in thread
From: Nicolas Bock @ 2014-02-05 4:38 UTC (permalink / raw
To: gentoo-commits
commit: 0aab773af53a3c31a9dd8a88a8560822ab3f19be
Author: Christoph Junghans <ottxor <AT> gentoo <DOT> org>
AuthorDate: Wed Feb 5 02:58:19 2014 +0000
Commit: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
CommitDate: Wed Feb 5 02:58:19 2014 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=0aab773a
block slot=0
Package-Manager: portage-2.2.7
---
sci-physics/lammps/ChangeLog | 3 +++
sci-physics/lammps/lammps-20140201.ebuild | 3 ++-
2 files changed, 5 insertions(+), 1 deletion(-)
diff --git a/sci-physics/lammps/ChangeLog b/sci-physics/lammps/ChangeLog
index c5700d3..009a973 100644
--- a/sci-physics/lammps/ChangeLog
+++ b/sci-physics/lammps/ChangeLog
@@ -2,6 +2,9 @@
# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+ 05 Feb 2014; Christoph Junghans <ottxor@gentoo.org> lammps-20140201.ebuild:
+ block slot=0
+
*lammps-20140201 (01 Feb 2014)
01 Feb 2014; Nicolas Bock <nicolasbock@gentoo.org> +lammps-20140201.ebuild,
diff --git a/sci-physics/lammps/lammps-20140201.ebuild b/sci-physics/lammps/lammps-20140201.ebuild
index 8c6e17b..ec553be 100644
--- a/sci-physics/lammps/lammps-20140201.ebuild
+++ b/sci-physics/lammps/lammps-20140201.ebuild
@@ -51,7 +51,8 @@ KEYWORDS="~amd64"
IUSE="doc examples gzip lammps-memalign mpi package-dipole package-meam package-rigid"
DEPEND="mpi? ( virtual/mpi )"
-RDEPEND="${DEPEND}"
+RDEPEND="${DEPEND}
+ !${CATEGORY}/${PN}:0"
S="${WORKDIR}/${MY_P}"
^ permalink raw reply related [flat|nested] 34+ messages in thread
* [gentoo-commits] proj/sci:master commit in: sci-physics/lammps/
@ 2014-02-06 19:56 Nicolas Bock
0 siblings, 0 replies; 34+ messages in thread
From: Nicolas Bock @ 2014-02-06 19:56 UTC (permalink / raw
To: gentoo-commits
commit: 32fedb93cad58e1a56cf2c40fc98cd713a78ea15
Author: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
AuthorDate: Thu Feb 6 19:55:12 2014 +0000
Commit: Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
CommitDate: Thu Feb 6 19:55:58 2014 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=32fedb93
sci-physics/lammps: Remove from sci overlay after moving it to main tree.
---
sci-physics/lammps/ChangeLog | 14 ----
sci-physics/lammps/lammps-20140201.ebuild | 117 ------------------------------
sci-physics/lammps/metadata.xml | 31 --------
3 files changed, 162 deletions(-)
diff --git a/sci-physics/lammps/ChangeLog b/sci-physics/lammps/ChangeLog
deleted file mode 100644
index 009a973..0000000
--- a/sci-physics/lammps/ChangeLog
+++ /dev/null
@@ -1,14 +0,0 @@
-# ChangeLog for sci-physics/lammps
-# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
-# $Header: $
-
- 05 Feb 2014; Christoph Junghans <ottxor@gentoo.org> lammps-20140201.ebuild:
- block slot=0
-
-*lammps-20140201 (01 Feb 2014)
-
- 01 Feb 2014; Nicolas Bock <nicolasbock@gentoo.org> +lammps-20140201.ebuild,
- +metadata.xml:
- sci-physics/lammps: Upstream now releases a stable channel I added Feb 1 2014
- in the stable slot to indicate that upstream considers this version more
- tested and stable than their normal frequent releases.
diff --git a/sci-physics/lammps/lammps-20140201.ebuild b/sci-physics/lammps/lammps-20140201.ebuild
deleted file mode 100644
index ea1a0d9..0000000
--- a/sci-physics/lammps/lammps-20140201.ebuild
+++ /dev/null
@@ -1,117 +0,0 @@
-# Copyright 1999-2014 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-physics/lammps/lammps-20140129.ebuild,v 1.1 2014/01/27 18:20:39 nicolasbock Exp $
-
-EAPI=5
-
-FORTRAN_NEEDED="package-meam"
-
-inherit eutils fortran-2
-
-convert_month() {
- case $1 in
- 01) echo Jan
- ;;
- 02) echo Feb
- ;;
- 03) echo Mar
- ;;
- 04) echo Apr
- ;;
- 05) echo May
- ;;
- 06) echo Jun
- ;;
- 07) echo Jul
- ;;
- 08) echo Aug
- ;;
- 09) echo Sep
- ;;
- 10) echo Oct
- ;;
- 11) echo Nov
- ;;
- 12) echo Dec
- ;;
- *) echo unknown
- ;;
- esac
-}
-
-MY_P=${PN}-$((10#${PV:6:2}))$(convert_month ${PV:4:2})${PV:2:2}
-
-DESCRIPTION="Large-scale Atomic/Molecular Massively Parallel Simulator"
-HOMEPAGE="http://lammps.sandia.gov/"
-SRC_URI="http://lammps.sandia.gov/tars/${MY_P}.tar.gz"
-
-LICENSE="GPL-2"
-SLOT="stable"
-KEYWORDS="~amd64"
-IUSE="doc examples gzip lammps-memalign mpi package-dipole package-meam package-rigid"
-
-DEPEND="mpi? ( virtual/mpi )"
-RDEPEND="
- ${DEPEND}
- !${CATEGORY}/${PN}:0
- "
-
-S="${WORKDIR}/${MY_P}"
-
-lmp_emake() {
- local LAMMPS_INCLUDEFLAGS="$(usex gzip '-DLAMMPS_GZIP' '')"
- LAMMPS_INCLUDEFLAGS+="$(usex lammps-memalign ' -DLAMMPS_MEMALIGN' '')"
-
- # Note: The lammps makefile uses CC to indicate the C++ compiler.
- emake \
- ARCHIVE=$(tc-getAR) \
- CC=$(usex mpi "mpic++" "$(tc-getCXX)") \
- F90=$(usex mpi "mpif90" "$(tc-getFC)") \
- LINK=$(usex mpi "mpic++" "$(tc-getCXX)") \
- CCFLAGS="${CXXFLAGS}" \
- F90FLAGS="${FCFLAGS}" \
- LINKFLAGS="${LDFLAGS}" \
- LMP_INC="${LAMMPS_INCLUDEFLAGS}" \
- MPI_INC=$(usex mpi '' "-I../STUBS") \
- MPI_PATH=$(usex mpi '' '-L../STUBS') \
- MPI_LIB=$(usex mpi '' '-lmpi_stubs') \
- "$@"
-}
-
-src_compile() {
- # Compile stubs for serial version.
- use mpi || lmp_emake -C src stubs
-
- # Build optional packages.
- if use package-meam; then
- lmp_emake -C src yes-meam
- lmp_emake -j1 -C lib/meam -f Makefile.gfortran
- fi
- use package-dipole && emake -C src yes-dipole
- use package-rigid && emake -C src yes-rigid
-
- # Compile.
- lmp_emake -C src serial
-}
-
-src_install() {
- newbin "src/lmp_serial" "lmp"
-
- local LAMMPS_POTENTIALS="/usr/share/${PF}/potentials"
- insinto "${LAMMPS_POTENTIALS}"
- doins potentials/*
- echo "LAMMPS_POTENTIALS=${LAMMPS_POTENTIALS}" > 99lammps
- doenvd 99lammps
-
- if use examples; then
- local LAMMPS_EXAMPLES="/usr/share/${PF}/examples"
- insinto "${LAMMPS_EXAMPLES}"
- doins -r examples/*
- fi
-
- dodoc README
- if use doc; then
- dodoc doc/Manual.pdf
- dohtml -r doc/*
- fi
-}
diff --git a/sci-physics/lammps/metadata.xml b/sci-physics/lammps/metadata.xml
deleted file mode 100644
index 7a1dc94..0000000
--- a/sci-physics/lammps/metadata.xml
+++ /dev/null
@@ -1,31 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
- <longdescription lang="en">
- LAMMPS is a classical molecular dynamics code, and an acronym for
- Large-scale Atomic/Molecular Massively Parallel Simulator.
-
- LAMMPS has potentials for soft materials (biomolecules, polymers) and
- solid-state materials (metals, semiconductors) and coarse-grained or
- mesoscopic systems. It can be used to model atoms or, more generically,
- as a parallel particle simulator at the atomic, meso, or continuum
- scale.
-
- LAMMPS runs on single processors or in parallel using message-passing
- techniques and a spatial-decomposition of the simulation domain. The
- code is designed to be easy to modify or extend with new functionality.
- </longdescription>
- <use>
- <flag name="lammps-memalign">Enables the use of the posix_memalign()
- call instead of malloc() when large chunks or memory are allocated
- by LAMMPS</flag>
- <flag name="package-meam">modified EAM potential</flag>
- <flag name="package-dipole">point dipole particles</flag>
- <flag name="package-rigid">rigid bodies</flag>
- </use>
- <herd>sci-physics</herd>
- <maintainer>
- <email>nicolasbock@gentoo.org</email>
- </maintainer>
-</pkgmetadata>
-
^ permalink raw reply related [flat|nested] 34+ messages in thread
end of thread, other threads:[~2014-02-06 19:56 UTC | newest]
Thread overview: 34+ messages (download: mbox.gz follow: Atom feed
-- links below jump to the message on this page --
2013-07-09 20:55 [gentoo-commits] proj/sci:master commit in: sci-physics/lammps/ Nicolas Bock
-- strict thread matches above, loose matches on Subject: below --
2014-02-06 19:56 Nicolas Bock
2014-02-05 4:38 Nicolas Bock
2014-02-05 4:36 Nicolas Bock
2014-02-01 23:05 Nicolas Bock
2013-12-29 0:31 Justin Lecher
2013-12-22 0:13 Christoph Junghans
2013-12-13 19:12 Nicolas Bock
2013-12-04 19:04 Nicolas Bock
2013-11-22 19:33 Nicolas Bock
2013-11-11 21:48 Nicolas Bock
2013-10-16 4:49 Nicolas Bock
2013-09-27 15:17 Nicolas Bock
2013-09-18 13:51 Nicolas Bock
2013-09-02 18:17 Nicolas Bock
2013-08-13 22:20 Nicolas Bock
2013-07-16 21:04 Nicolas Bock
2013-07-09 20:55 Nicolas Bock
2013-07-03 16:41 Nicolas Bock
2013-06-27 0:01 Christoph Junghans
2013-06-26 18:33 Nicolas Bock
2013-06-26 16:31 Nicolas Bock
2013-06-26 5:04 Christoph Junghans
2013-05-28 20:06 Nicolas Bock
2013-05-28 19:53 Nicolas Bock
2013-05-28 19:46 Nicolas Bock
2013-05-16 21:22 Nicolas Bock
2013-05-16 21:22 Nicolas Bock
2013-05-10 22:05 Nicolas Bock
2013-05-10 21:54 Nicolas Bock
2013-05-10 18:31 Nicolas Bock
2013-05-10 17:46 Nicolas Bock
2013-05-10 17:34 Nicolas Bock
2013-05-10 16:06 Nicolas Bock
This is a public inbox, see mirroring instructions
for how to clone and mirror all data and code used for this inbox