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* [gentoo-commits] proj/sci:vtk commit in: /
@ 2013-07-11 20:26 Justin Lecher
  2013-06-26  7:09 ` [gentoo-commits] proj/sci:jlec " Justin Lecher
  2013-07-08 12:08 ` [gentoo-commits] proj/sci:master " Justin Lecher
  0 siblings, 2 replies; 27+ messages in thread
From: Justin Lecher @ 2013-07-11 20:26 UTC (permalink / raw
  To: gentoo-commits

commit:     e2667d72a9cda457057fc4531574c2634dc92387
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Fri Jun 21 10:44:31 2013 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Fri Jun 21 10:44:31 2013 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=e2667d72

Merge branch 'master' into jlec

* master: (29 commits)
  sci-chemistry/shiftx: Block shiftx2 at runtime
  sci-chemistry/shiftx: Fix patch and add patch for buffer overflow fix
  The announced, but forgotten, change in sci-libs/fox-4.1.2-r2 actually done.
  The announced, but forgotten, change in sci-libs/etsf_io-1.0.3-r2 actually done.
  sci-physics/abinit/files/6.12.3-gui-makefiles.tbz put back, its deletion was a mistake.
  sci-libs/trilinos: Version bump and rewrite
  sci-libs/coinor-clp: Version bump and patch for mpi
  For sci-libs/bigdft-abi and sci-physics/bigdft, filter LDFLAGS for cuda use not to break nvcc.
  To sci-libs/bigdft-abi and sci-physics/bigdft added dev-util/gdbus-codegen among dependencies.
  Spaces in the testing snippet of fortran code in sci-libs/bigdft-abi-1.0.4.ebuild protected from reformatting.
  fixed qt4 build
  fixing manifests
  big fixes of metadata and package sub-herd re-distribution
  sci-physics/openmx upgraded to 3.7.3 with some openMP and MPI C/F90 juggling, previous sci-physics/openmx-3.6 preserved for the time being.
  sci-chemistry/talosn: drop upstream path in favour of our
  sci-chemistry/modeller: Fix broken symlink, #473680
  sci-chemistry/mics: New package
  sci-chemistry/talosn: New package
  Abinit & friends upgraded to sci-physics/abinit-7.2.2. BigDFT moved from sci-libs to sci-physics, sci-physics/abinit uses sci-libs/bigdft-abi instead. Usage of LIBDIR/finclude abandoned in favour of /usr/include, as mostly used upstream. Old files cleaned up.
  Version of bigdft bumped to 1.7_pre24, moved from sci-libs to sci-physics. No longer used as a library by sci-physics/abinit. Usage of LIBDIR/finclude abandoned in favour of /usr/include, as used upstream.
  ...


 app-text/dgs/metadata.xml                          |   3 -
 app-text/jabref/ChangeLog                          |  10 +
 ...jabref-2.10b.ebuild => jabref-2.10_beta.ebuild} |   8 +-
 app-vim/freefem++-syntax/metadata.xml              |   7 +-
 app-vim/vim-gromacs/metadata.xml                   |   5 +-
 dev-db/cppdb/metadata.xml                          |  19 +-
 dev-libs/simclist/metadata.xml                     |  17 +-
 dev-ml/mlgmpidl/metadata.xml                       |  23 +-
 dev-ml/ocamlgraph/metadata.xml                     |  47 ++-
 dev-ml/zarith/metadata.xml                         |  20 +-
 dev-perl/opal-client/metadata.xml                  |   3 -
 dev-python/opal-client/metadata.xml                |   5 +-
 dev-tcltk/img_rotate/metadata.xml                  |   5 +-
 dev-tcltk/togl/metadata.xml                        |   3 -
 media-gfx/librecad/ChangeLog                       |   6 +
 media-gfx/librecad/Manifest                        |   4 +-
 media-gfx/librecad/files/1.0.0_rc2-gcc4.6.patch    |  38 ---
 .../files/librecad-1.0.0_rc2-version.patch         |  11 -
 media-gfx/librecad/librecad-1.0.2.ebuild           |  45 ---
 media-gfx/librecad/librecad-2.0.0_beta5.ebuild     |  48 ---
 media-gfx/librecad/librecad-2.0.0_rc1.ebuild       |  27 +-
 media-gfx/librecad/metadata.xml                    |  23 +-
 media-libs/OpenMOIV/metadata.xml                   |   3 -
 media-libs/libgfx/metadata.xml                     |   3 -
 profiles/package.mask                              |   6 +
 sci-biology/perlprimer/metadata.xml                |   3 -
 sci-chemistry/GromacsWrapper/metadata.xml          |   2 +-
 sci-chemistry/ball/metadata.xml                    |   2 +-
 sci-chemistry/burrow-owl/metadata.xml              |   5 +-
 sci-chemistry/camshift/metadata.xml                |   5 +-
 sci-chemistry/chemBuild/metadata.xml               |   2 +-
 sci-chemistry/chimera-bin/metadata.xml             |   2 +-
 sci-chemistry/chooch/metadata.xml                  |   5 +-
 sci-chemistry/cnsface/metadata.xml                 |   5 +-
 sci-chemistry/concoord/metadata.xml                |   2 +-
 sci-chemistry/coot/metadata.xml                    |   3 -
 sci-chemistry/cs-rosetta/metadata.xml              |   2 +-
 sci-chemistry/curvefit/metadata.xml                |   2 +-
 sci-chemistry/direx/metadata.xml                   |   3 -
 sci-chemistry/dssp2pdb/metadata.xml                |   3 -
 sci-chemistry/freeon/ChangeLog                     |   9 +
 ...ch => freeon-2012.05.03-no_internal_hdf5.patch} |  32 +-
 .../files/freeon-9999-no_internal_hdf5.patch       |  25 ++
 .../files/freeon-9999-no_internal_libs.patch       |  47 ---
 sci-chemistry/freeon/freeon-2012.05.03.ebuild      |   7 +-
 sci-chemistry/freeon/freeon-9999.ebuild            |   7 +-
 sci-chemistry/hydronmr/metadata.xml                |   2 +-
 sci-chemistry/jana2000/metadata.xml                |   3 -
 sci-chemistry/jligand/metadata.xml                 |   5 +-
 sci-chemistry/ligplot+/metadata.xml                |   2 +-
 sci-chemistry/mage/metadata.xml                    |   3 -
 sci-chemistry/mddnmr/metadata.xml                  |   5 +-
 sci-chemistry/mics/ChangeLog                       |  10 +
 sci-chemistry/mics/Manifest                        |   1 +
 .../{mgltools-autodocktools => mics}/metadata.xml  |   0
 sci-chemistry/mics/mics-1.00.2011.327.12.00.ebuild |  51 +++
 sci-chemistry/modelfree/metadata.xml               |   2 +-
 sci-chemistry/modeller/ChangeLog                   |   6 +
 ...odeller-9.12.ebuild => modeller-9.12-r1.ebuild} |   2 +-
 sci-chemistry/mtz2hkl/metadata.xml                 |   3 -
 sci-chemistry/mtz2sca/metadata.xml                 |   3 -
 sci-chemistry/nMOLDYN/ChangeLog                    |  12 +
 sci-chemistry/nMOLDYN/Manifest                     |   1 +
 sci-chemistry/{trajng => nMOLDYN}/metadata.xml     |   0
 sci-chemistry/nMOLDYN/nMOLDYN-3.0.10.ebuild        |  24 ++
 sci-chemistry/phenix-bin/metadata.xml              |   2 +-
 sci-chemistry/polygon/metadata.xml                 |   5 +-
 sci-chemistry/pymol-apbs-plugin/metadata.xml       |   5 +-
 sci-chemistry/rosetta-tools/metadata.xml           |   3 -
 sci-chemistry/rosetta/metadata.xml                 |  23 +-
 sci-chemistry/shiftx/ChangeLog                     |   7 +
 sci-chemistry/shiftx/files/1.1-Makefile.patch      |  15 +-
 sci-chemistry/shiftx/files/1.1-bfr-overflow.patch  |  16 +
 sci-chemistry/shiftx/metadata.xml                  |   3 -
 sci-chemistry/shiftx/shiftx-1.1.ebuild             |   7 +-
 sci-chemistry/shiftx2/metadata.xml                 |   2 +-
 sci-chemistry/simpson/metadata.xml                 |   2 +-
 sci-chemistry/smmp/metadata.xml                    |   5 +-
 sci-chemistry/specView/metadata.xml                |   2 +-
 sci-chemistry/ssp/metadata.xml                     |   2 +-
 sci-chemistry/talosn/ChangeLog                     |  16 +
 sci-chemistry/talosn/Manifest                      |   1 +
 .../metadata.xml                                   |   0
 .../talosn/talosn-4.01.2013.148.15.55-r2.ebuild    |  68 ++++
 sci-chemistry/ucsf-tools/metadata.xml              |   2 +-
 sci-chemistry/unio/metadata.xml                    |   5 +-
 sci-libs/Cgraph/metadata.xml                       |   5 +-
 sci-libs/bigdft-abi/ChangeLog                      |  29 ++
 sci-libs/bigdft-abi/Manifest                       |   1 +
 .../bigdft-abi-1.0.4.ebuild}                       |  78 +++--
 .../files/bigdft-abi-1.0.4-tests.tar.bz2           | Bin 0 -> 402968 bytes
 sci-libs/bigdft/metadata.xml                       |  19 +-
 sci-libs/cnsface-scripts/metadata.xml              |   3 -
 sci-libs/coinor-clp/ChangeLog                      |   6 +
 sci-libs/coinor-clp/Manifest                       |   2 +-
 ...-clp-1.15.0.ebuild => coinor-clp-1.15.1.ebuild} |   4 +-
 .../files/coinor-clp-1.15.1-mpi-header.patch       |  12 +
 sci-libs/driftwood/metadata.xml                    |   5 +-
 sci-libs/etsf_io/ChangeLog                         |  13 +-
 ..._io-1.0.3-r1.ebuild => etsf_io-1.0.3-r2.ebuild} |   6 +-
 sci-libs/etsf_io/metadata.xml                      |   5 +-
 sci-libs/fox/ChangeLog                             |  14 +-
 ...patch => 4.1.2-r2-install-customizations.patch} |   4 +-
 .../{fox-4.1.2-r1.ebuild => fox-4.1.2-r2.ebuild}   |  10 +-
 sci-libs/fox/metadata.xml                          |  19 +-
 sci-libs/libxc/ChangeLog                           |  11 +-
 sci-libs/libxc/Manifest                            |   2 +-
 ...libxc-1.1.0-r1.ebuild => libxc-1.2.0-r1.ebuild} |  26 +-
 .../{libxc-1.2.0.ebuild => libxc-2.0.1.ebuild}     |  27 +-
 sci-libs/libxc/libxc-9999.ebuild                   |  27 +-
 sci-libs/libxc/metadata.xml                        |   5 +-
 sci-libs/med/metadata.xml                          |   5 +-
 sci-libs/msms/metadata.xml                         |   5 +-
 sci-libs/mumps/ChangeLog                           |   5 +-
 sci-libs/mumps/mumps-4.10.0-r2.ebuild              |   5 +-
 sci-libs/pagmo/metadata.xml                        |  13 +-
 sci-libs/starparse/metadata.xml                    |   5 +-
 sci-libs/trilinos/ChangeLog                        |   7 +-
 sci-libs/trilinos/metadata.xml                     |  16 +
 sci-libs/trilinos/trilinos-11.2.3.ebuild           | 186 +++++++++++
 sci-libs/wannier90/ChangeLog                       |   7 +
 sci-libs/wannier90/metadata.xml                    |   5 +-
 ...annier90-1.2.ebuild => wannier90-1.2-r1.ebuild} |   0
 sci-mathematics/alt-ergo/metadata.xml              |  23 +-
 sci-mathematics/apron/metadata.xml                 |  31 +-
 sci-mathematics/flocq/metadata.xml                 |  17 +-
 sci-mathematics/frama-c/metadata.xml               |  28 +-
 sci-mathematics/gap-guava/metadata.xml             |   5 +-
 sci-mathematics/gappa/metadata.xml                 |  22 +-
 sci-mathematics/gappalib-coq/metadata.xml          |  15 +-
 sci-mathematics/giac/metadata.xml                  |  24 +-
 sci-mathematics/ltl2ba/metadata.xml                |   3 -
 sci-mathematics/pff/metadata.xml                   |  17 +-
 sci-mathematics/why/metadata.xml                   |  32 +-
 sci-physics/LoopTools/metadata.xml                 |   2 +-
 sci-physics/abinit/ChangeLog                       |  16 +
 sci-physics/abinit/Manifest                        |   3 +-
 sci-physics/abinit/abinit-7.0.5.ebuild             | 356 ---------------------
 .../{abinit-7.0.4.ebuild => abinit-7.2.2.ebuild}   |  75 +++--
 sci-physics/abinit/files/6.0.3-fftw.patch          |  14 -
 .../abinit/files/6.12.1-libabinit_options.patch    |  57 ----
 sci-physics/atompaw/ChangeLog                      |   7 +
 ...aw-3.0.1.9.ebuild => atompaw-3.0.1.9-r1.ebuild} |  11 +-
 sci-physics/atompaw/metadata.xml                   |  11 +-
 sci-physics/atompaw2abinit/metadata.xml            |   5 +-
 {sci-libs => sci-physics}/bigdft/ChangeLog         |  23 +-
 sci-physics/bigdft/Manifest                        |   1 +
 .../bigdft/bigdft-1.7_pre24.ebuild                 |  37 +--
 .../files/bigdft-1.7-dev.24-nolib_mods.patch       |  14 +-
 sci-physics/elk/ChangeLog                          |   4 +
 sci-physics/elk/elk-1.4.22.ebuild                  |   2 +-
 sci-physics/herwig++/metadata.xml                  |   2 +-
 sci-physics/openmx/ChangeLog                       |   7 +
 sci-physics/openmx/Manifest                        |   2 +
 sci-physics/openmx/files/3.7-fortran_objects.patch |  15 +
 sci-physics/openmx/metadata.xml                    |   2 +-
 sci-physics/openmx/openmx-3.7.3.ebuild             | 161 ++++++++++
 sci-physics/thepeg/metadata.xml                    |   2 +-
 sci-visualization/gnuplot/ChangeLog                |   3 +
 sci-visualization/gnuplot/gnuplot-4.7.9999.ebuild  |   2 +-
 sci-visualization/v_sim/metadata.xml               |   3 -
 www-apps/py-swish-e/metadata.xml                   |   5 +-
 x11-libs/tr/metadata.xml                           |   3 -
 163 files changed, 1278 insertions(+), 1264 deletions(-)


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* [gentoo-commits] proj/sci:vtk commit in: /
@ 2013-07-11 20:27 Justin Lecher
  0 siblings, 0 replies; 27+ messages in thread
From: Justin Lecher @ 2013-07-11 20:27 UTC (permalink / raw
  To: gentoo-commits

commit:     ffbc434cc003a1d815b290608ba3e4e5e371d20c
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Thu Jul 11 18:31:57 2013 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Thu Jul 11 18:31:57 2013 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=ffbc434c

Merge branch 'jlec'

* jlec:
  sci-chemistry/coot: Update pc patch


 sci-chemistry/coot/ChangeLog           |   3 +
 sci-chemistry/coot/files/9999-pc.patch | 561 +++++++++++++++++----------------
 2 files changed, 284 insertions(+), 280 deletions(-)


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* [gentoo-commits] proj/sci:vtk commit in: /
@ 2013-07-11 20:27 Justin Lecher
  0 siblings, 0 replies; 27+ messages in thread
From: Justin Lecher @ 2013-07-11 20:27 UTC (permalink / raw
  To: gentoo-commits

commit:     521c3879e88d373f4eb885af030528caa867d7e8
Author:     Sébastien Fabbro <bicatali <AT> gentoo <DOT> org>
AuthorDate: Tue Jul  9 23:48:53 2013 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Tue Jul  9 23:48:53 2013 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=521c3879

Merge branch 'master' of git://git.overlays.gentoo.org/proj/sci


 licenses/mpich                                     | 39 ----------------------
 sci-physics/lammps/ChangeLog                       | 12 +++++++
 sci-physics/lammps/Manifest                        |  1 +
 ...mmps-20130701.ebuild => lammps-20130708.ebuild} | 16 +++++++--
 4 files changed, 26 insertions(+), 42 deletions(-)


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* [gentoo-commits] proj/sci:vtk commit in: /
@ 2013-07-11 20:27 Justin Lecher
  0 siblings, 0 replies; 27+ messages in thread
From: Justin Lecher @ 2013-07-11 20:27 UTC (permalink / raw
  To: gentoo-commits

commit:     68f704a5acc2a2db8dd7eae6fd683576af41e28c
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Mon Jul  8 12:07:04 2013 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Mon Jul  8 12:07:04 2013 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=68f704a5

Merge branch 'jlec'

* jlec:
  Completly removed the directory check in the java source (we have everything under control in gentoo). Removed the .py extension from the -system.patch to make that part working again (it's installed without extensions to /usr/bin/!).
  Work in progress Signed-off-by: Justin Lecher <jlec <AT> gentoo.org>
  sci-chemistry/rosetta: Fix: Ebuild calls die in a subshell
  sci-chemistry/rosetta: Add patches from www.csrosetta.org
  update to new lange patches Signed-off-by: Justin Lecher <jlec <AT> gentoo.org>


 sci-chemistry/shiftx2/ChangeLog                    |   8 +-
 ...xes.patch => shiftx2-1.07_p20120106-java.patch} |  45 +++-
 .../files/shiftx2-1.07_p20120106-system.patch      | 231 +++++++++++++++++++++
 .../shiftx2/shiftx2-1.07_p20120106.ebuild          |  30 ++-
 4 files changed, 299 insertions(+), 15 deletions(-)


^ permalink raw reply	[flat|nested] 27+ messages in thread
* [gentoo-commits] proj/sci:vtk commit in: /
@ 2013-07-11 20:27 Justin Lecher
  0 siblings, 0 replies; 27+ messages in thread
From: Justin Lecher @ 2013-07-11 20:27 UTC (permalink / raw
  To: gentoo-commits

commit:     bafcd12ba1034dd265fe4ac8d4f8497afdef8fe3
Author:     Justin <jlec <AT> j-schmitz <DOT> net>
AuthorDate: Sun Jul  7 14:06:03 2013 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Sun Jul  7 14:06:03 2013 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=bafcd12b

Merge pull request #89 from gentryx/master

Added ebuild for LibGeoDecomp 0.2.0


 sci-libs/libgeodecomp/Manifest                           |  1 +
 ...bgeodecomp-0.1.0.ebuild => libgeodecomp-0.2.0.ebuild} | 16 +++++++++++++---
 2 files changed, 14 insertions(+), 3 deletions(-)


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* [gentoo-commits] proj/sci:vtk commit in: /
@ 2013-07-11 20:27 Justin Lecher
  0 siblings, 0 replies; 27+ messages in thread
From: Justin Lecher @ 2013-07-11 20:27 UTC (permalink / raw
  To: gentoo-commits

commit:     f1dcaee3267c375546293c9210d39b80c00c4ca1
Author:     Christoph Junghans <ottxor <AT> gentoo <DOT> org>
AuthorDate: Sun Jul  7 23:30:15 2013 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Sun Jul  7 23:30:15 2013 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=f1dcaee3

Merge branch 'master' of ssh://github.com/gentoo-science/sci


 sci-libs/libgeodecomp/Manifest                           |  1 +
 ...bgeodecomp-0.1.0.ebuild => libgeodecomp-0.2.0.ebuild} | 16 +++++++++++++---
 2 files changed, 14 insertions(+), 3 deletions(-)


^ permalink raw reply	[flat|nested] 27+ messages in thread
* [gentoo-commits] proj/sci:vtk commit in: /
@ 2013-07-11 20:27 Justin Lecher
  0 siblings, 0 replies; 27+ messages in thread
From: Justin Lecher @ 2013-07-11 20:27 UTC (permalink / raw
  To: gentoo-commits

commit:     9fbdb4ae6a0b9287dc4b9417e2ca7ced7b26c60b
Author:     Christoph Junghans <ottxor <AT> gentoo <DOT> org>
AuthorDate: Thu Jul  4 19:10:29 2013 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Thu Jul  4 19:10:29 2013 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=9fbdb4ae

Merge branch 'master' of ssh://github.com/gentoo-science/sci


 dev-util/amdapp/amdapp-2.8.ebuild                  | 19 ++++++-
 dev-util/intel-ocl-sdk/Manifest                    |  1 +
 .../intel-ocl-sdk/intel-ocl-sdk-3.0.67279.ebuild   | 65 ++++++++++++++++++++++
 dev-util/intel-ocl-sdk/metadata.xml                | 17 ++++++
 media-gfx/brlcad/ChangeLog                         |  3 +
 media-gfx/brlcad/Manifest                          |  1 +
 6 files changed, 103 insertions(+), 3 deletions(-)


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* [gentoo-commits] proj/sci:vtk commit in: /
@ 2013-07-11 20:27 Justin Lecher
  0 siblings, 0 replies; 27+ messages in thread
From: Justin Lecher @ 2013-07-11 20:27 UTC (permalink / raw
  To: gentoo-commits

commit:     f8f8325388e6a8978ef271640515a144b53a8ed5
Author:     Andreas Schäfer <gentryx <AT> gmx <DOT> de>
AuthorDate: Sat Jul  6 20:33:34 2013 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Sat Jul  6 20:33:34 2013 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=f8f83253

Merge /usr/local/portage/andis_overlay


 sci-libs/libgeodecomp/Manifest                           |  1 +
 ...bgeodecomp-0.1.0.ebuild => libgeodecomp-0.2.0.ebuild} | 16 +++++++++++++---
 2 files changed, 14 insertions(+), 3 deletions(-)


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* [gentoo-commits] proj/sci:vtk commit in: /
@ 2013-07-11 20:27 Justin Lecher
  0 siblings, 0 replies; 27+ messages in thread
From: Justin Lecher @ 2013-07-11 20:27 UTC (permalink / raw
  To: gentoo-commits

commit:     7a1714a356cddb1aa2bb3ca5773328f973fe56b2
Author:     Justin <jlec <AT> j-schmitz <DOT> net>
AuthorDate: Thu Jul  4 06:18:51 2013 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Thu Jul  4 06:18:51 2013 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=7a1714a3

Merge pull request #87 from gentryx/master

Fixed ebuild for AMDAPP and added updated ebuild for Intel OpenCL SDK


 dev-util/amdapp/amdapp-2.8.ebuild                  | 19 ++++++-
 dev-util/intel-ocl-sdk/Manifest                    |  1 +
 .../intel-ocl-sdk/intel-ocl-sdk-3.0.67279.ebuild   | 65 ++++++++++++++++++++++
 dev-util/intel-ocl-sdk/metadata.xml                | 17 ++++++
 4 files changed, 99 insertions(+), 3 deletions(-)


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* [gentoo-commits] proj/sci:vtk commit in: /
@ 2013-07-11 20:27 Justin Lecher
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From: Justin Lecher @ 2013-07-11 20:27 UTC (permalink / raw
  To: gentoo-commits

commit:     637e2d028af727c3d7c0ab09bb29bdd0f80beeb7
Author:     Andreas Schäfer <gentryx <AT> gmx <DOT> de>
AuthorDate: Wed Jul  3 19:57:02 2013 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Wed Jul  3 19:57:02 2013 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=637e2d02

Merge /usr/local/portage/andis_overlay


 dev-util/intel-ocl-sdk/metadata.xml | 5 ++++-
 1 file changed, 4 insertions(+), 1 deletion(-)


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* [gentoo-commits] proj/sci:vtk commit in: /
@ 2013-07-11 20:27 Justin Lecher
  0 siblings, 0 replies; 27+ messages in thread
From: Justin Lecher @ 2013-07-11 20:27 UTC (permalink / raw
  To: gentoo-commits

commit:     76e58b23060b68622a22a9812e954a44a9c7037b
Author:     Sébastien Fabbro <bicatali <AT> gentoo <DOT> org>
AuthorDate: Wed Jul  3 19:57:29 2013 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Wed Jul  3 19:57:29 2013 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=76e58b23

Merge branch 'master' of git://git.overlays.gentoo.org/proj/sci; github.com:gentoo-science/sci


 sci-physics/lammps/ChangeLog              |   9 +++
 sci-physics/lammps/Manifest               |   1 +
 sci-physics/lammps/lammps-20130701.ebuild | 105 ++++++++++++++++++++++++++++++
 sci-physics/lammps/metadata.xml           |  31 +++++++++
 sys-cluster/charm/ChangeLog               |   7 ++
 sys-cluster/charm/charm-6.5.1.ebuild      |  46 ++++++++-----
 sys-cluster/charm/metadata.xml            |   3 +
 7 files changed, 184 insertions(+), 18 deletions(-)


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* [gentoo-commits] proj/sci:vtk commit in: /
@ 2013-07-11 20:27 Justin Lecher
  0 siblings, 0 replies; 27+ messages in thread
From: Justin Lecher @ 2013-07-11 20:27 UTC (permalink / raw
  To: gentoo-commits

commit:     f2d3e656f959b32f0c70626924c0dc06de747be5
Author:     Andreas Schäfer <gentryx <AT> gmx <DOT> de>
AuthorDate: Wed Jul  3 19:53:51 2013 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Wed Jul  3 19:53:51 2013 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=f2d3e656

Merge /usr/local/portage/andis_overlay


 dev-util/amdapp/amdapp-2.8.ebuild                     |  6 ++++--
 dev-util/intel-ocl-sdk/intel-ocl-sdk-3.0.67279.ebuild | 10 +++++++---
 2 files changed, 11 insertions(+), 5 deletions(-)


^ permalink raw reply	[flat|nested] 27+ messages in thread
* [gentoo-commits] proj/sci:vtk commit in: /
@ 2013-07-11 20:27 Justin Lecher
  0 siblings, 0 replies; 27+ messages in thread
From: Justin Lecher @ 2013-07-11 20:27 UTC (permalink / raw
  To: gentoo-commits

commit:     70ee018686f6160008c53cc8e59ff3ce06612260
Author:     Andreas Schäfer <gentryx <AT> gmx <DOT> de>
AuthorDate: Wed Jul  3 03:54:22 2013 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Wed Jul  3 03:54:22 2013 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=70ee0186

Merge /usr/local/portage/andis_overlay


 dev-util/amdapp/amdapp-2.8.ebuild | 6 ++++--
 1 file changed, 4 insertions(+), 2 deletions(-)


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* [gentoo-commits] proj/sci:vtk commit in: /
@ 2013-07-11 20:27 Justin Lecher
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From: Justin Lecher @ 2013-07-11 20:27 UTC (permalink / raw
  To: gentoo-commits

commit:     c5d9b66462d9cc0c9a17de7c4e95c85f12701a23
Author:     Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
AuthorDate: Wed Jul  3 16:40:40 2013 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Wed Jul  3 16:40:40 2013 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=c5d9b664

Merge branch 'master' of github.com:gentoo-science/sci


 sci-geosciences/pydap/ChangeLog                    |  8 ++++-
 sci-geosciences/pydap/Manifest                     |  2 +-
 sci-geosciences/pydap/metadata.xml                 | 12 +++----
 sci-geosciences/pydap/pydap-3.0.3.ebuild           | 34 -------------------
 sci-geosciences/pydap/pydap-3.1.ebuild             | 38 ++++++++++++++++++++++
 sci-libs/armadillo/ChangeLog                       |  6 ++++
 sci-libs/armadillo/Manifest                        |  2 +-
 ...llo-3.820.1.ebuild => armadillo-3.900.6.ebuild} |  2 +-
 sci-libs/mlpack/ChangeLog                          |  6 ++++
 sci-libs/mlpack/Manifest                           |  2 +-
 .../{mlpack-1.0.5.ebuild => mlpack-1.0.6.ebuild}   |  0
 11 files changed, 67 insertions(+), 45 deletions(-)


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* [gentoo-commits] proj/sci:vtk commit in: /
@ 2013-07-11 20:26 Justin Lecher
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From: Justin Lecher @ 2013-07-11 20:26 UTC (permalink / raw
  To: gentoo-commits

commit:     0dbff7dea8ebc8bfc1b3708ba59cfcee34e0273c
Author:     Andreas Schäfer <gentryx <AT> gmx <DOT> de>
AuthorDate: Tue Jul  2 20:03:06 2013 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Tue Jul  2 20:03:06 2013 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=0dbff7de

Merge https://github.com/gentoo-science/sci


 app-doc/root-docs/ChangeLog                        |   6 +
 app-doc/root-docs/Manifest                         |   2 +-
 ...ocs-5.34.08.ebuild => root-docs-5.34.09.ebuild} |   2 +-
 metadata/layout.conf                               |   6 +
 sci-chemistry/ambertools/ChangeLog                 |   4 +-
 sci-chemistry/ambertools/ambertools-12.ebuild      |   2 +-
 sci-chemistry/pymol-plugins-ezviz/ChangeLog        |   5 +
 ...uild => pymol-plugins-ezviz-1.0.2005-r1.ebuild} |   1 +
 sci-libs/bigdft-abi/ChangeLog                      |   8 +
 ...abi-1.0.4.ebuild => bigdft-abi-1.0.4-r1.ebuild} |   3 +
 .../files/bigdft-abi-1.0.4-CUDA_gethostname.patch  |  22 +++
 sci-libs/msms/ChangeLog                            |  10 +-
 sci-libs/msms/Manifest                             |   3 +-
 sci-libs/msms/metadata.xml                         |   2 +-
 sci-libs/msms/msms-1.5.4-r1.ebuild                 |  54 ------
 .../{msms-1.5.6_rc2.ebuild => msms-1.5.6.ebuild}   |  19 +--
 sci-mathematics/ufc/ChangeLog                      |   5 +-
 sci-mathematics/ufc/ufc-1.4.2.ebuild               |   4 +-
 sci-physics/root/ChangeLog                         |   6 +
 sci-physics/root/Manifest                          |   5 +-
 sci-physics/root/metadata.xml                      |   1 +
 .../{root-5.34.08.ebuild => root-5.34.09.ebuild}   |  15 +-
 sys-cluster/charm/ChangeLog                        |  13 ++
 sys-cluster/charm/Manifest                         |   1 +
 sys-cluster/charm/charm-6.5.1.ebuild               | 181 +++++++++++++++++++++
 .../charm/files/charm-6.5.0-charmc-gentoo.patch    |  25 +++
 sys-cluster/charm/metadata.xml                     |  15 ++
 sys-cluster/empi/ChangeLog                         |  14 ++
 .../empi/{empi-0.8.ebuild => empi-0.9.ebuild}      |  14 +-
 .../empi/files/{ChangeLog-0.8 => ChangeLog-0.9}    |   0
 sys-cluster/empi/files/{empi-0.8 => empi-0.9}      |   4 +-
 .../files/{eselect.mpi-0.8 => eselect.mpi-0.9}     |   0
 sys-cluster/empi/metadata.xml                      |   8 +-
 sys-cluster/hpl/ChangeLog                          |   8 +
 sys-cluster/hpl/Manifest                           |   3 +-
 .../hpl/{hpl-2.0-r1.ebuild => hpl-2.1.ebuild}      |  33 ++--
 sys-cluster/openmpi/ChangeLog                      |  11 +-
 ...le-malloc-override-inside-of-Gentoo-sandb.patch |  42 +++++
 ...penmpi-1.6.4.ebuild => openmpi-1.6.4-r1.ebuild} |   4 +-
 39 files changed, 451 insertions(+), 110 deletions(-)


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* [gentoo-commits] proj/sci:vtk commit in: /
@ 2013-07-11 20:26 Justin Lecher
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From: Justin Lecher @ 2013-07-11 20:26 UTC (permalink / raw
  To: gentoo-commits

commit:     01912d585cd65e73ab596d080e2debe61de19930
Author:     Andreas Schäfer <gentryx <AT> gmx <DOT> de>
AuthorDate: Tue Jul  2 20:02:52 2013 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Tue Jul  2 20:02:52 2013 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=01912d58

Merge /usr/local/portage/andis_overlay


 dev-util/amdapp/amdapp-2.8.ebuild                     | 3 ++-
 dev-util/intel-ocl-sdk/intel-ocl-sdk-3.0.67279.ebuild | 6 ++++--
 2 files changed, 6 insertions(+), 3 deletions(-)


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* [gentoo-commits] proj/sci:vtk commit in: /
@ 2013-07-11 20:26 Justin Lecher
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From: Justin Lecher @ 2013-07-11 20:26 UTC (permalink / raw
  To: gentoo-commits

commit:     fcddbe9646bf40e7743f3505b5cdca29d766ae4d
Author:     Andreas Schäfer <gentryx <AT> gmx <DOT> de>
AuthorDate: Thu Jun 27 22:13:41 2013 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Thu Jun 27 22:13:41 2013 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=fcddbe96

Merge /usr/local/portage/andis_overlay


 dev-util/amdapp/amdapp-2.8.ebuild                  | 10 +++-
 dev-util/intel-ocl-sdk/Manifest                    |  1 +
 .../intel-ocl-sdk/intel-ocl-sdk-3.0.67279.ebuild   | 59 ++++++++++++++++++++++
 dev-util/intel-ocl-sdk/metadata.xml                | 14 +++++
 4 files changed, 83 insertions(+), 1 deletion(-)


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* [gentoo-commits] proj/sci:vtk commit in: /
@ 2013-07-11 20:26 Justin Lecher
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From: Justin Lecher @ 2013-07-11 20:26 UTC (permalink / raw
  To: gentoo-commits

commit:     f964406968cbe45f9268653af44c2dc6b52baadd
Author:     Sébastien Fabbro <bicatali <AT> gentoo <DOT> org>
AuthorDate: Wed Jun 26 15:26:34 2013 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Wed Jun 26 15:26:34 2013 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=f9644069

Merge branch 'master' of git://git.overlays.gentoo.org/proj/sci; github.com:gentoo-science/sci


 dev-lang/ispc/ChangeLog                            |  3 ++
 dev-lang/ispc/ispc-9999.ebuild                     |  3 +-
 sci-chemistry/gnome-chemistry-utils/ChangeLog      |  4 ++
 .../gnome-chemistry-utils-0.14.2.ebuild            |  2 +-
 sci-chemistry/gnome-chemistry-utils/metadata.xml   |  8 ++--
 sci-chemistry/modeller/ChangeLog                   |  4 ++
 ...ller-9.12-r1.ebuild => modeller-9.12-r2.ebuild} |  3 +-
 sci-chemistry/pymol/ChangeLog                      |  3 ++
 sci-chemistry/pymol/pymol-9999.ebuild              |  2 +-
 sci-chemistry/ucsf-tools/ChangeLog                 |  3 ++
 sci-chemistry/ucsf-tools/ucsf-tools-9999.ebuild    | 13 +++++-
 sci-physics/lammps/ChangeLog                       |  3 ++
 sci-physics/lammps/lammps-20130526.ebuild          | 25 +++++------
 sys-cluster/charm/ChangeLog                        |  3 ++
 sys-cluster/charm/charm-6.5.0.ebuild               | 51 ++++++++--------------
 ...orline.patch => modules-3.2.10-errorline.patch} |  1 -
 .../modules/files/modules-3.2.9c-errorline.patch   |  1 -
 sys-cluster/modules/modules-3.2.10.ebuild          |  6 +--
 18 files changed, 79 insertions(+), 59 deletions(-)


^ permalink raw reply	[flat|nested] 27+ messages in thread
* [gentoo-commits] proj/sci:vtk commit in: /
@ 2013-07-11 20:26 Justin Lecher
  0 siblings, 0 replies; 27+ messages in thread
From: Justin Lecher @ 2013-07-11 20:26 UTC (permalink / raw
  To: gentoo-commits

commit:     9fb3b01bb87df3f976ef259d9aa4a09012ac4988
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Wed Jun 26 14:54:49 2013 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Wed Jun 26 14:54:49 2013 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=9fb3b01b

Merge branch 'master-broken'

* master-broken:
  sci-chemistry/ucsf-tools: Fix compilation with latest gcc
  sci-chemistry/modeller: Fix lib position, #474696
  sci-chemistry/pymol: Update repo uri
  sci-chemistry/pymol: Update repo uri



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* [gentoo-commits] proj/sci:vtk commit in: /
@ 2013-07-11 20:26 Justin Lecher
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From: Justin Lecher @ 2013-07-11 20:26 UTC (permalink / raw
  To: gentoo-commits

commit:     f43609fc308239ce00e3b66ad121c43dbf15b1ed
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Mon Jun 17 05:55:15 2013 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Mon Jun 17 05:55:15 2013 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=f43609fc

Merge branch 'master' into jlec

* master: (120 commits)
  add missing masks for live ebuilds
  dev-python/healpy: Initial import
  dev-java/jhealpix: Initial import
  sci-astronomy/healpix_idl: Initial import
  sci-astronomy/healpix_cxx: Initial import
  sci-astronomy/chealpix: Initial import
  sci-biology/twinscan: Bump to EAPI=5 and fix license
  sci-biology/ssaha2-bin: Version Bump; restrict license; add QA_PREBUILT for binaries
  sci-biology/smalt-bin: Version Bump; restrict license; add QA_PREBUILT for binaries
  sci-biology/sequin: Version BUmp; restrcit license; add QA_PREBUILT for binaries; install html files into sys path
  sci-biology/quicktree: Bump to EAPI=5 and fix license
  sci-biology/gap2caf: Bump to EAPI=5 and fix license; make it build with eautoreconf
  sci-biology/erpin: Bump to EAPI=5 and respect FLAGS / AR
  sci-biology/clover: Version BUmp; fixed license; respect LDFLAGS
  sci-chemistry/shiftx2: Respect FLAGS
  Enhanced the sci-chemistry/shiftx ebuild. Still needs some love for the emake part (portage complains about LDFLAGS not respected), but should work.
  sci-chemistry/pymol-plugins-psico: Bump to EAPI=5 and distutils-r1.eclass
  sci-chemistry/smmp: Bump to EAPI=5 and python-r1.eclass
  sci-chemistry/specView: Bump to EAPI=5 and python-single-r1.eclass
  sci-chemistry/pyquante: Bump to EAPI=5 and distutils-r1.eclass
  ...


 app-benchmarks/btl/ChangeLog                       |   5 +-
 app-benchmarks/btl/btl-9999.ebuild                 |  11 +-
 app-benchmarks/btl/metadata.xml                    |  14 +-
 app-benchmarks/numbench/ChangeLog                  |   8 +-
 app-benchmarks/numbench/metadata.xml               |  14 +-
 app-benchmarks/numbench/numbench-0.2.ebuild        |  28 +-
 app-benchmarks/numbench/numbench-9999.ebuild       |  28 +-
 app-doc/blacs-docs/Manifest                        |   2 +-
 app-doc/blas-docs/Manifest                         |   6 +-
 app-doc/lapack-docs/Manifest                       |   4 +-
 app-doc/root-docs/Manifest                         |   5 -
 app-text/dgs/Manifest                              |   2 +-
 app-vim/freefem++-syntax/Manifest                  |   2 +-
 dev-cpp/growler-arch/Manifest                      |   4 +-
 dev-cpp/growler-core/Manifest                      |   2 +-
 dev-cpp/growler-math/Manifest                      |   2 +-
 dev-cpp/growler-thread/Manifest                    |   2 +-
 dev-java/jeuclid-core/Manifest                     |   2 +-
 dev-java/jgraphx/ChangeLog                         |   7 +-
 dev-java/jgraphx/Manifest                          |   3 -
 dev-java/jgraphx/jgraphx-1.2.0.7.ebuild            |  44 --
 dev-java/jgraphx/jgraphx-1.3.0.2.ebuild            |  44 --
 dev-java/jgraphx/jgraphx-1.4.1.0.ebuild            |  18 +-
 dev-java/jgraphx/jgraphx-1.4.1.2.ebuild            |  44 --
 dev-java/jgraphx/jgraphx-1.8.0.6.ebuild            |  20 +-
 dev-java/jgraphx/metadata.xml                      |   4 +-
 dev-java/jhealpix/ChangeLog                        |   9 +
 dev-java/jhealpix/Manifest                         |   1 +
 dev-java/jhealpix/jhealpix-3.11.ebuild             |  43 ++
 dev-java/jhealpix/metadata.xml                     |  11 +
 dev-java/joda-convert/Manifest                     |   2 +-
 dev-java/vecmath/Manifest                          |   4 +-
 dev-lang/ispc/ChangeLog                            |   3 +
 dev-lang/ispc/ispc-9999.ebuild                     |   2 +-
 dev-lang/julia/ChangeLog                           |   5 +-
 dev-lang/julia/julia-9999.ebuild                   |   2 +-
 dev-lang/julia/metadata.xml                        |   4 +-
 dev-lang/path64/ChangeLog                          |   6 +-
 dev-lang/path64/metadata.xml                       |  22 +-
 dev-lang/path64/path64-9999.ebuild                 |   4 +-
 dev-libs/asmjit/ChangeLog                          |   8 +-
 dev-libs/asmjit/Manifest                           |   2 +-
 ...-1.0_beta_p2.ebuild => asmjit-1.0_beta4.ebuild} |   6 +-
 dev-libs/asmjit/metadata.xml                       |  12 +-
 dev-libs/libunzip/Manifest                         |   2 +-
 dev-libs/simclist/Manifest                         |   5 +-
 dev-ml/mlgmpidl/Manifest                           |   6 +-
 dev-ml/ocamlgraph/Manifest                         |   4 -
 dev-perl/BTLib/Manifest                            |   2 +-
 dev-perl/Lab-Instrument/Manifest                   |   2 +-
 dev-perl/Lab-Tools/Manifest                        |   2 +-
 dev-perl/Lab-VISA/Manifest                         |   2 +-
 dev-perl/go-db-perl/Manifest                       |   2 +-
 dev-perl/opal-client/Manifest                      |   2 +-
 dev-python/GOGrapher/ChangeLog                     |   3 +
 dev-python/GOGrapher/GOGrapher-9999.ebuild         |  21 +-
 dev-python/astropy/ChangeLog                       |   8 +
 dev-python/astropy/astropy-9999.ebuild             |  40 +-
 dev-python/astropy/metadata.xml                    |  10 +-
 dev-python/astropysics/ChangeLog                   |   6 +-
 dev-python/astropysics/astropysics-9999.ebuild     |  55 +-
 dev-python/astropysics/metadata.xml                |   4 +-
 dev-python/coards/ChangeLog                        |   8 +-
 dev-python/coards/Manifest                         |   2 +-
 dev-python/coards/coards-0.2.2.ebuild              |  22 -
 dev-python/coards/coards-1.0.5.ebuild              |  23 +
 dev-python/coards/metadata.xml                     |  10 +-
 dev-python/coords/ChangeLog                        |   6 +-
 dev-python/coords/Manifest                         |   2 +-
 dev-python/coords/coords-0.37.ebuild               |  22 +-
 dev-python/coords/metadata.xml                     |   4 +-
 dev-python/cosmocalc/ChangeLog                     |   6 +-
 dev-python/cosmocalc/Manifest                      |   2 +-
 dev-python/cosmocalc/cosmocalc-0.1.2-r1.ebuild     |  23 +-
 dev-python/cosmocalc/metadata.xml                  |   4 +-
 dev-python/dimensionful/ChangeLog                  |   6 +-
 dev-python/dimensionful/dimensionful-9999.ebuild   |  37 +-
 dev-python/dimensionful/metadata.xml               |   8 +-
 dev-python/emcee/ChangeLog                         |   8 +-
 dev-python/emcee/Manifest                          |   2 +-
 dev-python/emcee/emcee-1.0.1.ebuild                |  35 -
 dev-python/emcee/emcee-1.2.0.ebuild                |  27 +
 dev-python/emcee/metadata.xml                      |   4 +-
 dev-python/ffc/ChangeLog                           |   8 +-
 dev-python/ffc/Manifest                            |   2 +-
 dev-python/ffc/ffc-0.9.4.ebuild                    |  23 -
 dev-python/ffc/ffc-1.2.0.ebuild                    |  18 +
 dev-python/ffc/metadata.xml                        |   4 +-
 dev-python/fiat/ChangeLog                          |   8 +-
 dev-python/fiat/Manifest                           |   2 +-
 .../fiat/{fiat-0.9.2.ebuild => fiat-1.1.ebuild}    |  14 +-
 dev-python/fiat/metadata.xml                       |   4 +-
 dev-python/go-parser/ChangeLog                     |   6 +-
 dev-python/go-parser/Manifest                      |   2 +-
 dev-python/go-parser/go-parser-9999.ebuild         |  13 +-
 dev-python/go-parser/metadata.xml                  |  10 +-
 dev-python/healpy/ChangeLog                        |   9 +
 dev-python/healpy/Manifest                         |   1 +
 dev-python/healpy/healpy-1.6.2.ebuild              |  34 +
 dev-python/healpy/metadata.xml                     |  10 +
 dev-python/inference/ChangeLog                     |   7 +-
 dev-python/inference/inference-0.4.ebuild          |  31 +-
 dev-python/inference/metadata.xml                  |   4 +-
 dev-python/instant/ChangeLog                       |   8 +-
 dev-python/instant/Manifest                        |   2 +-
 dev-python/instant/instant-0.9.8.ebuild            |  23 -
 dev-python/instant/instant-1.2.0.ebuild            |  18 +
 dev-python/instant/metadata.xml                    |   4 +-
 dev-python/meshpy/ChangeLog                        |   8 +-
 dev-python/meshpy/Manifest                         |   2 +-
 ...meshpy-0.91.2.ebuild => meshpy-2013.1.2.ebuild} |  29 +-
 dev-python/meshpy/metadata.xml                     |   5 +-
 dev-python/numpydoc/ChangeLog                      |   6 +-
 dev-python/numpydoc/Manifest                       |   2 +-
 dev-python/numpydoc/metadata.xml                   |   4 +-
 dev-python/numpydoc/numpydoc-0.4.ebuild            |  22 +-
 dev-python/omniorbpy/ChangeLog                     |   6 +-
 dev-python/omniorbpy/Manifest                      |   2 +-
 dev-python/omniorbpy/metadata.xml                  |   2 +-
 dev-python/omniorbpy/omniorbpy-3.4.ebuild          |  90 +--
 dev-python/opal-client/ChangeLog                   |   8 +-
 dev-python/opal-client/Manifest                    |   2 +-
 dev-python/opal-client/metadata.xml                |   8 +-
 dev-python/opal-client/opal-client-2.2-r1.ebuild   |  55 --
 dev-python/opal-client/opal-client-2.4.1.ebuild    |  42 ++
 dev-python/pyhdf/ChangeLog                         |   8 +
 dev-python/pyhdf/Manifest                          |   2 +-
 dev-python/pyhdf/metadata.xml                      |  16 +-
 dev-python/pyhdf/pyhdf-0.8.3.ebuild                |  29 +-
 dev-python/pythoncgns/ChangeLog                    |   6 +-
 dev-python/pythoncgns/Manifest                     |   2 +-
 dev-python/pythoncgns/metadata.xml                 |   2 +-
 dev-python/pythoncgns/pythoncgns-2009.10.30.ebuild |  10 +-
 dev-python/ufl/ChangeLog                           |   5 +-
 dev-python/ufl/Manifest                            |   2 +-
 dev-python/ufl/metadata.xml                        |   4 +-
 dev-python/ufl/ufl-0.5.4.ebuild                    |  17 +-
 dev-python/viper/ChangeLog                         |   8 +-
 dev-python/viper/Manifest                          |   2 +-
 dev-python/viper/metadata.xml                      |   4 +-
 dev-python/viper/viper-0.4.6.ebuild                |  23 -
 dev-python/viper/viper-1.0.1.ebuild                |  18 +
 dev-tcltk/img_rotate/ChangeLog                     |   6 +-
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 dev-util/smartgit/Manifest                         |   2 +-
 licenses/GRL                                       |  15 +
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 net-misc/dhcp/ChangeLog                            |  61 --
 net-misc/dhcp/Manifest                             |   1 -
 net-misc/dhcp/dhcp-4.2.3_p2-r1.ebuild              | 245 -------
 net-misc/dhcp/files/dhcp-3.0-fix-perms.patch       |  15 -
 net-misc/dhcp/files/dhcp-3.0.3-dhclient-dbus.patch |  84 ---
 .../dhcp/files/dhcp-3.0.3-dhclient-no-down.patch   |  70 --
 net-misc/dhcp/files/dhcp-4.0-dhclient-ntp.patch    | 216 ------
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 .../dhcp/files/dhcp-4.2.0-errwarn-message.patch    |  31 -
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 net-misc/dhcp/files/dhcp-4.2.2-bind-disable.patch  |  13 -
 .../files/dhcp-4.2.2-bind-parallel-build.patch     |  14 -
 .../files/dhcp-4.2.2-dhclient-resolvconf.patch     | 409 ------------
 .../files/dhcp-4.2.2-dhclient-stdin-conf.patch     | 113 ----
 net-misc/dhcp/files/dhcp-4.2.2-gpxe-cid.patch      | 132 ----
 net-misc/dhcp/files/dhcp-4.2.2-improved-xid.patch  | 138 ----
 net-misc/dhcp/files/dhcp-4.2.2-lpf-ib.patch        | 538 ---------------
 net-misc/dhcp/files/dhcp-4.2.2-nogateway.patch     |  46 --
 net-misc/dhcp/files/dhcp-4.2.2-xen-checksum.patch  | 249 -------
 net-misc/dhcp/files/dhcp-4.2.3-options.patch       | 391 -----------
 net-misc/dhcp/files/dhcpd.conf2                    |  28 -
 net-misc/dhcp/files/dhcpd.init2                    |  94 ---
 net-misc/dhcp/files/dhcpd.init5                    | 114 ----
 net-misc/dhcp/files/dhcrelay.conf                  |  13 -
 net-misc/dhcp/files/dhcrelay.init2                 |  29 -
 net-misc/dhcp/metadata.xml                         |  10 -
 perl-core/encoding-warnings/Manifest               |   2 +-
 profiles/arch/amd64/no-multilib/package.mask       |  27 -
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 .../astrometry/files/0.38-array-bounds.patch       |  11 -
 .../astrometry/files/0.38-as-needed.patch          | 694 -------------------
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 .../astrometry/files/0.38-system-libs.patch        |  48 --
 .../astrometry/files/0.43-as-needed.patch          | 366 ++++++++++
 ...r-flags.patch => 0.43-respect-user-flags.patch} |   3 +
 .../astrometry/files/0.43-system-libs.patch        | 742 +++++++++++++++++++++
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 sci-biology/sequin/sequin-20090722.ebuild          |  32 -
 sci-biology/sequin/sequin-20121202.ebuild          |  44 ++
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 .../{modeller-9.8.ebuild => modeller-9.12.ebuild}  |  96 ++-
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 sci-chemistry/nmrview/ChangeLog                    |   6 +-
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 sci-chemistry/nwchem/nwchem-6.1.1.ebuild           | 126 ----
 sci-chemistry/nwchem/nwchem-6.3.ebuild             |  10 +-
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 sci-chemistry/phaser/metadata.xml                  |  30 -
 sci-chemistry/phaser/phaser-2.1.4-r1.ebuild        | 138 ----
 sci-chemistry/phaser/phaser-2.1.4.ebuild           | 114 ----
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 .../polygon/files/{0710-db.patch => 0612-db.patch} |  20 +-
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 sci-chemistry/shiftx2/Manifest                     |   1 +
 sci-chemistry/shiftx2/files/gentoo-fixes.patch     | 194 ++++++
 sci-chemistry/shiftx2/metadata.xml                 |  39 ++
 .../shiftx2/shiftx2-1.07_p20120106.ebuild          | 112 ++++
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 sci-libs/coinhsl/metadata.xml                      |  12 +
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 .../{ipopt-3.10.3.ebuild => ipopt-3.11.0.ebuild}   |  19 +-
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 sci-libs/trilinos/trilinos-10.10.1.ebuild          | 124 ----
 sci-libs/trilinos/trilinos-11.0.3.ebuild           |  12 +-
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 sci-mathematics/cadabra/cadabra-1.25.ebuild        |  89 ---
 sci-mathematics/cadabra/cadabra-1.28.ebuild        |  87 ---
 sci-mathematics/cadabra/cadabra-1.29.ebuild        |  87 ---
 sci-mathematics/cadabra/cadabra-1.31.ebuild        |  14 +-
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 sci-mathematics/pest/Manifest                      |   6 +-
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 sci-misc/opennlp-maxent/Manifest                   |   2 +-
 sci-misc/opennlp-tools/Manifest                    |  88 +--
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 sci-misc/salome-kernel/Manifest                    |   4 +-
 sci-misc/salome-pycalculator/Manifest              |   4 +-
 sci-misc/stanford-parser/Manifest                  |   2 +-
 sci-misc/stanford-tagger/Manifest                  |   2 +-
 sci-physics/espresso++/ChangeLog                   |   4 +
 sci-physics/espresso++/espresso++-9999.ebuild      |  22 +-
 sci-physics/espresso++/metadata.xml                |  16 +-
 sci-physics/espresso/ChangeLog                     |   4 +
 sci-physics/espresso/espresso-9999.ebuild          |  24 +-
 sci-physics/espresso/metadata.xml                  |  10 +-
 sci-physics/qcl/Manifest                           |   8 +-
 sci-visualization/gnuplot/ChangeLog                |   4 +
 sci-visualization/gnuplot/gnuplot-4.6.9999.ebuild  |   2 +-
 sci-visualization/gnuplot/gnuplot-4.7.9999.ebuild  |   2 +-
 sci-visualization/nodemon/Manifest                 |   2 +-
 sys-cluster/condor/ChangeLog                       |  40 --
 sys-cluster/condor/Manifest                        |   2 -
 sys-cluster/condor/condor-7.5.2.ebuild             | 160 -----
 sys-cluster/condor/condor-7.5.4.ebuild             | 160 -----
 sys-cluster/condor/files/condor.confd              |   2 -
 sys-cluster/condor/files/condor.initd              |  64 --
 sys-cluster/condor/files/condor_config.local       |  11 -
 sys-cluster/condor/metadata.xml                    |  26 -
 sys-cluster/ganglia_jobmonarch/Manifest            |   2 +-
 sys-cluster/lustre/ChangeLog                       |   4 +
 sys-cluster/lustre/lustre-9999.ebuild              |   6 +-
 sys-cluster/lustre/metadata.xml                    |  20 +-
 sys-cluster/modules/modules-3.2.9c-r1.ebuild       |   2 +-
 sys-cluster/mpe2/ChangeLog                         |  15 -
 sys-cluster/mpe2/Manifest                          |   1 -
 .../files/slog2sdk-trace_rlog-makefile-fixes.patch |  68 --
 .../slog2sdk-trace_sample-makefile-fixes.patch     |  68 --
 sys-cluster/mpe2/metadata.xml                      |  10 -
 sys-cluster/mpe2/mpe2-1.0.6_p1.ebuild              | 148 ----
 sys-cluster/nullmpi/ChangeLog                      |   6 +-
 sys-cluster/nullmpi/Manifest                       |   2 +-
 sys-cluster/nullmpi/metadata.xml                   |  10 +-
 sys-cluster/nullmpi/nullmpi-0.7.ebuild             |   4 +-
 sys-cluster/nullmpi/nullmpi-9999.ebuild            |  16 +-
 sys-cluster/pyslice/Manifest                       |   2 +-
 sys-devel/gdebugger/Manifest                       |   4 +-
 sys-infiniband/librxe/Manifest                     |   2 +-
 www-apps/py-swish-e/ChangeLog                      |   6 +-
 www-apps/py-swish-e/Manifest                       |   2 +-
 www-apps/py-swish-e/metadata.xml                   |   8 +-
 www-apps/py-swish-e/py-swish-e-0.5.ebuild          |  12 +-
 x11-libs/tr/Manifest                               |   2 +-
 x11-libs/xview-bin/ChangeLog                       |   3 +
 x11-libs/xview-bin/xview-bin-3.2_p1428.ebuild      |   2 +-
 x11-misc/envytools/ChangeLog                       |   6 +-
 x11-misc/envytools/envytools-9999.ebuild           |  18 +-
 x11-misc/envytools/metadata.xml                    |  10 +-
 579 files changed, 4325 insertions(+), 8161 deletions(-)


^ permalink raw reply	[flat|nested] 27+ messages in thread
* [gentoo-commits] proj/sci:master commit in: /
@ 2013-07-08 12:08 Justin Lecher
  2013-07-11 20:26 ` [gentoo-commits] proj/sci:vtk " Justin Lecher
  0 siblings, 1 reply; 27+ messages in thread
From: Justin Lecher @ 2013-07-08 12:08 UTC (permalink / raw
  To: gentoo-commits

commit:     871dd6c9683391d6caedb0c82efac78e8befd55c
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Sun Jun 30 15:31:13 2013 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Sun Jun 30 15:31:13 2013 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=871dd6c9

Merge branch 'master' into jlec

* master: (36 commits)
  sci-libs/msms: Version BUmp; Bump to new distutil-r1.eclass
  app-doc/root-docs: version bump
  sci-physics/root: version bump
  sys-cluster/hpl: version bump and fixes
  fixed deps
  In sci-libs/bigdft-abi-1.0.4-r1, CUDA support made compile.
  moved to gx86
  moved to gx86
  Beautify
  Beautify
  Beautify.
  Added new package: projections
  Added new package: projections
  Bashified package name mangling.
  sys-cluster/modules: Prefix keyworded. Added tests. FHS fixes. Add bunch of fedora patches
  Fixed missing use flag.
  sci-chemistry/ucsf-tools: Fix compilation with latest gcc
  sci-chemistry/modeller: Fix lib position, #474696
  sci-chemistry/pymol: Update repo uri
  sci-chemistry/pymol: Update repo uri
  ...


 app-admin/eselect/ChangeLog                        |   6 +
 app-admin/eselect/Manifest                         |   2 +-
 ...1.3.4-r100.ebuild => eselect-1.3.5-r100.ebuild} |   0
 app-doc/root-docs/ChangeLog                        |   6 +
 app-doc/root-docs/Manifest                         |   2 +-
 ...ocs-5.34.08.ebuild => root-docs-5.34.09.ebuild} |   2 +-
 dev-java/fits/ChangeLog                            |   9 +-
 dev-java/fits/Manifest                             |   2 +-
 .../{fits-1.08.1.ebuild => fits-1.11.0.ebuild}     |   6 +-
 dev-lang/ispc/ChangeLog                            |   3 +
 dev-lang/ispc/ispc-9999.ebuild                     |   3 +-
 sci-chemistry/ambertools/ChangeLog                 |   4 +-
 sci-chemistry/ambertools/ambertools-12.ebuild      |   2 +-
 sci-chemistry/gnome-chemistry-utils/ChangeLog      |   4 +
 .../gnome-chemistry-utils-0.14.2.ebuild            |   2 +-
 sci-chemistry/gnome-chemistry-utils/metadata.xml   |   8 +-
 sci-chemistry/modeller/ChangeLog                   |   4 +
 ...ller-9.12-r1.ebuild => modeller-9.12-r2.ebuild} |   3 +-
 sci-chemistry/pymol/ChangeLog                      |   3 +
 sci-chemistry/pymol/pymol-9999.ebuild              |   2 +-
 sci-chemistry/ucsf-tools/ChangeLog                 |   3 +
 sci-chemistry/ucsf-tools/ucsf-tools-9999.ebuild    |  13 +-
 sci-libs/bigdft-abi/ChangeLog                      |   8 +
 ...abi-1.0.4.ebuild => bigdft-abi-1.0.4-r1.ebuild} |   3 +
 .../files/bigdft-abi-1.0.4-CUDA_gethostname.patch  |  22 +++
 sci-libs/lwpr/ChangeLog                            |   9 +-
 sci-libs/lwpr/Manifest                             |   2 +-
 sci-libs/lwpr/files/lwpr-1.2.2-setup.py.patch      |  12 --
 sci-libs/lwpr/lwpr-1.2.2.ebuild                    |  83 ---------
 sci-libs/lwpr/lwpr-1.2.5.ebuild                    |  51 ++++++
 sci-libs/lwpr/metadata.xml                         |  10 +-
 sci-libs/msms/ChangeLog                            |  10 +-
 sci-libs/msms/Manifest                             |   3 +-
 sci-libs/msms/metadata.xml                         |   2 +-
 sci-libs/msms/msms-1.5.4-r1.ebuild                 |  54 ------
 .../{msms-1.5.6_rc2.ebuild => msms-1.5.6.ebuild}   |  19 +--
 sci-physics/lammps/ChangeLog                       |  55 ------
 sci-physics/lammps/Manifest                        |   3 -
 sci-physics/lammps/lammps-20130512.ebuild          |  72 --------
 sci-physics/lammps/lammps-20130514.ebuild          |  75 ---------
 sci-physics/lammps/lammps-20130526.ebuild          |  75 ---------
 sci-physics/lammps/metadata.xml                    |  30 ----
 sci-physics/root/ChangeLog                         |   6 +
 sci-physics/root/Manifest                          |   5 +-
 sci-physics/root/metadata.xml                      |   1 +
 .../{root-5.34.08.ebuild => root-5.34.09.ebuild}   |  15 +-
 sys-cluster/charm/ChangeLog                        |  26 ---
 sys-cluster/charm/Manifest                         |   1 -
 sys-cluster/charm/charm-6.5.0.ebuild               | 175 -------------------
 .../charm/files/charm-6.5.0-charmc-gentoo.patch    |  25 ---
 sys-cluster/charm/metadata.xml                     |  10 --
 sys-cluster/charmdebug/ChangeLog                   |  12 ++
 sys-cluster/charmdebug/Manifest                    |   1 +
 sys-cluster/charmdebug/charmdebug-6.2.0.ebuild     |  31 ++++
 .../charmdebug}/metadata.xml                       |   0
 sys-cluster/hpl/ChangeLog                          |   8 +
 sys-cluster/hpl/Manifest                           |   3 +-
 .../hpl/{hpl-2.0-r1.ebuild => hpl-2.1.ebuild}      |  33 ++--
 sys-cluster/modules/ChangeLog                      |  10 ++
 sys-cluster/modules/files/createmodule.py          | 186 +++++++++++++++++++++
 sys-cluster/modules/files/createmodule.sh          | 166 ++++++++++++++++++
 .../modules/files/modules-3.2.10-avail.patch       |  12 ++
 .../modules/files/modules-3.2.10-bindir.patch      |  11 ++
 .../modules/files/modules-3.2.10-clear.patch       |  11 ++
 ...orline.patch => modules-3.2.10-errorline.patch} |   1 -
 .../modules/files/modules-3.2.10-versioning.patch  |  10 ++
 .../modules/files/modules-3.2.9c-errorline.patch   |   1 -
 sys-cluster/modules/files/modules.sh.in            |   7 +
 sys-cluster/modules/metadata.xml                   |  20 ++-
 sys-cluster/modules/modules-3.2.10-r1.ebuild       |  61 +++++++
 sys-cluster/modules/modules-3.2.10.ebuild          |   6 +-
 sys-cluster/projections/ChangeLog                  |  13 ++
 sys-cluster/projections/Manifest                   |   1 +
 .../projections}/metadata.xml                      |   0
 sys-cluster/projections/projections-6.2.1.ebuild   |  30 ++++
 75 files changed, 811 insertions(+), 774 deletions(-)


^ permalink raw reply	[flat|nested] 27+ messages in thread
* [gentoo-commits] proj/sci:jlec commit in: /
@ 2013-07-08 11:54 Justin Lecher
  2013-07-11 20:26 ` [gentoo-commits] proj/sci:vtk " Justin Lecher
  0 siblings, 1 reply; 27+ messages in thread
From: Justin Lecher @ 2013-07-08 11:54 UTC (permalink / raw
  To: gentoo-commits

commit:     e88605269a92bfb4a232752657f59519603709da
Author:     Nicolas Bock <nicolasbock <AT> gmail <DOT> com>
AuthorDate: Wed Jun 26 18:32:49 2013 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Wed Jun 26 18:32:49 2013 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=e8860526

Merge branch 'master' of github.com:gentoo-science/sci


 dev-java/fits/ChangeLog                            |   9 +-
 dev-java/fits/Manifest                             |   2 +-
 .../{fits-1.08.1.ebuild => fits-1.11.0.ebuild}     |   6 +-
 sci-libs/lwpr/ChangeLog                            |   9 +-
 sci-libs/lwpr/Manifest                             |   2 +-
 sci-libs/lwpr/files/lwpr-1.2.2-setup.py.patch      |  12 --
 sci-libs/lwpr/lwpr-1.2.2.ebuild                    |  83 ---------
 sci-libs/lwpr/lwpr-1.2.5.ebuild                    |  51 ++++++
 sci-libs/lwpr/metadata.xml                         |  10 +-
 sys-cluster/modules/ChangeLog                      |  10 ++
 sys-cluster/modules/files/createmodule.py          | 186 +++++++++++++++++++++
 sys-cluster/modules/files/createmodule.sh          | 166 ++++++++++++++++++
 .../modules/files/modules-3.2.10-avail.patch       |  12 ++
 .../modules/files/modules-3.2.10-bindir.patch      |  11 ++
 .../modules/files/modules-3.2.10-clear.patch       |  11 ++
 .../modules/files/modules-3.2.10-versioning.patch  |  10 ++
 sys-cluster/modules/files/modules.sh.in            |   7 +
 sys-cluster/modules/metadata.xml                   |  20 ++-
 sys-cluster/modules/modules-3.2.10-r1.ebuild       |  61 +++++++
 19 files changed, 561 insertions(+), 117 deletions(-)


^ permalink raw reply	[flat|nested] 27+ messages in thread
* [gentoo-commits] proj/sci:jlec commit in: /
@ 2013-07-08 11:54 Justin Lecher
  2013-07-11 20:26 ` [gentoo-commits] proj/sci:vtk " Justin Lecher
  0 siblings, 1 reply; 27+ messages in thread
From: Justin Lecher @ 2013-07-08 11:54 UTC (permalink / raw
  To: gentoo-commits

commit:     5bdbd20181a8d1c6e88a852b8c869804ebf450d1
Author:     Sébastien Fabbro <bicatali <AT> gentoo <DOT> org>
AuthorDate: Wed Jun 26 16:53:22 2013 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Wed Jun 26 16:53:22 2013 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=5bdbd201

Merge branch 'master' of git://git.overlays.gentoo.org/proj/sci; github.com:gentoo-science/sci


 sci-physics/lammps/ChangeLog              | 3 +++
 sci-physics/lammps/lammps-20130526.ebuild | 2 +-
 2 files changed, 4 insertions(+), 1 deletion(-)


^ permalink raw reply	[flat|nested] 27+ messages in thread
* [gentoo-commits] proj/sci:ccp4 commit in: /
@ 2013-07-08 11:54 Justin Lecher
  2013-07-11 20:26 ` [gentoo-commits] proj/sci:vtk " Justin Lecher
  0 siblings, 1 reply; 27+ messages in thread
From: Justin Lecher @ 2013-07-08 11:54 UTC (permalink / raw
  To: gentoo-commits

commit:     d1167d3e9fbea263a965cb527c1ec46e27318474
Author:     Justin <jlec <AT> j-schmitz <DOT> net>
AuthorDate: Wed Jun 26 07:24:32 2013 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Wed Jun 26 07:24:32 2013 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=d1167d3e

Merge pull request #86 from gentryx/master

Added TCL patch to modules 3.2.10


 ...odules-3.2.9c-errorline.patch => modules-3.2.10-errorline.patch} | 1 -
 sys-cluster/modules/files/modules-3.2.9c-errorline.patch            | 1 -
 sys-cluster/modules/modules-3.2.10.ebuild                           | 6 +++---
 3 files changed, 3 insertions(+), 5 deletions(-)


^ permalink raw reply	[flat|nested] 27+ messages in thread
* [gentoo-commits] proj/sci:jlec commit in: /
@ 2013-06-26  7:09 Justin Lecher
  2013-07-11 20:26 ` [gentoo-commits] proj/sci:vtk " Justin Lecher
  0 siblings, 1 reply; 27+ messages in thread
From: Justin Lecher @ 2013-06-26  7:09 UTC (permalink / raw
  To: gentoo-commits

commit:     c40b625da6a65449986d4c2f7f1d90728531725c
Author:     Justin <jlec <AT> j-schmitz <DOT> net>
AuthorDate: Fri Jun 21 13:50:53 2013 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Fri Jun 21 13:50:53 2013 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=c40b625d

Merge pull request #85 from ercpe/jlec

Changes to the patch files to make the shiftx2 package working again.


 sci-chemistry/shiftx2/ChangeLog                    |  8 +++-
 .../files/shiftx2-1.07_p20120106-java.patch        | 45 +++++++++++++++++++---
 .../files/shiftx2-1.07_p20120106-system.patch      |  6 +--
 3 files changed, 49 insertions(+), 10 deletions(-)


^ permalink raw reply	[flat|nested] 27+ messages in thread
end of thread, other threads:[~2013-07-11 20:27 UTC | newest]

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2013-07-08 12:08 [gentoo-commits] proj/sci:master " Justin Lecher
2013-07-11 20:26 ` [gentoo-commits] proj/sci:vtk " Justin Lecher
2013-07-08 11:54 [gentoo-commits] proj/sci:jlec " Justin Lecher
2013-07-11 20:26 ` [gentoo-commits] proj/sci:vtk " Justin Lecher
2013-07-08 11:54 [gentoo-commits] proj/sci:jlec " Justin Lecher
2013-07-11 20:26 ` [gentoo-commits] proj/sci:vtk " Justin Lecher
2013-07-08 11:54 [gentoo-commits] proj/sci:ccp4 " Justin Lecher
2013-07-11 20:26 ` [gentoo-commits] proj/sci:vtk " Justin Lecher
2013-06-26  7:09 [gentoo-commits] proj/sci:jlec " Justin Lecher
2013-07-11 20:26 ` [gentoo-commits] proj/sci:vtk " Justin Lecher

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