From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) by finch.gentoo.org (Postfix) with ESMTP id 385BA1381F3 for ; Mon, 17 Jun 2013 05:55:53 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id F08A0E0975; Mon, 17 Jun 2013 05:55:42 +0000 (UTC) Received: from smtp.gentoo.org (smtp.gentoo.org [140.211.166.183]) (using TLSv1 with cipher AECDH-AES256-SHA (256/256 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id 7AE90E0975 for ; Mon, 17 Jun 2013 05:55:42 +0000 (UTC) Received: from hornbill.gentoo.org (hornbill.gentoo.org [94.100.119.163]) (using TLSv1 with cipher AECDH-AES256-SHA (256/256 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id 549AB33E527 for ; Mon, 17 Jun 2013 05:55:41 +0000 (UTC) Received: from localhost.localdomain (localhost [127.0.0.1]) by hornbill.gentoo.org (Postfix) with ESMTP id E70AEE5461 for ; Mon, 17 Jun 2013 05:55:39 +0000 (UTC) From: "Justin Lecher" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Justin Lecher" Message-ID: <1371413932.e1e48799c623338fedab433347c64dfce9b9aebe.jlec@gentoo> Subject: [gentoo-commits] proj/sci:fixing commit in: / X-VCS-Repository: proj/sci X-VCS-Committer: jlec X-VCS-Committer-Name: Justin Lecher X-VCS-Revision: e1e48799c623338fedab433347c64dfce9b9aebe X-VCS-Branch: fixing Date: Mon, 17 Jun 2013 05:55:39 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Archives-Salt: b8b0c629-4c77-4ed0-ba10-9c9cce7ef689 X-Archives-Hash: 3644063e87968c5bde3ac017f376eae3 commit: e1e48799c623338fedab433347c64dfce9b9aebe Author: Justin Lecher gentoo org> AuthorDate: Sun Jun 16 20:18:52 2013 +0000 Commit: Justin Lecher gentoo org> CommitDate: Sun Jun 16 20:18:52 2013 +0000 URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=e1e48799 Merge branch 'fixing' * fixing: sci-biology/twinscan: Bump to EAPI=5 and fix license sci-biology/ssaha2-bin: Version Bump; restrict license; add QA_PREBUILT for binaries sci-biology/smalt-bin: Version Bump; restrict license; add QA_PREBUILT for binaries sci-biology/sequin: Version BUmp; restrcit license; add QA_PREBUILT for binaries; install html files into sys path sci-biology/quicktree: Bump to EAPI=5 and fix license sci-biology/gap2caf: Bump to EAPI=5 and fix license; make it build with eautoreconf sci-biology/erpin: Bump to EAPI=5 and respect FLAGS / AR sci-biology/clover: Version BUmp; fixed license; respect LDFLAGS sci-biology/clover/ChangeLog | 6 ++- sci-biology/clover/Manifest | 4 +- sci-biology/clover/clover-2010.02.19.ebuild | 43 --------------------- sci-biology/clover/clover-2011.10.24.ebuild | 40 +++++++++++++++++++ sci-biology/clover/metadata.xml | 6 ++- sci-biology/erpin/ChangeLog | 5 ++- sci-biology/erpin/Manifest | 4 +- sci-biology/erpin/erpin-5.5b.ebuild | 23 ++++++----- sci-biology/erpin/metadata.xml | 10 ++--- sci-biology/gap2caf/ChangeLog | 8 ++++ sci-biology/gap2caf/Manifest | 4 +- sci-biology/gap2caf/gap2caf-2.1.0.ebuild | 45 +++++++++++----------- sci-biology/gap2caf/metadata.xml | 10 ++--- sci-biology/quicktree/ChangeLog | 6 ++- sci-biology/quicktree/Manifest | 2 +- sci-biology/quicktree/metadata.xml | 10 ++--- sci-biology/quicktree/quicktree-1.1-r1.ebuild | 17 ++++---- sci-biology/sequin/ChangeLog | 9 ++++- sci-biology/sequin/Manifest | 4 +- sci-biology/sequin/sequin-20090722.ebuild | 32 --------------- sci-biology/sequin/sequin-20121202.ebuild | 44 +++++++++++++++++++++ sci-biology/smalt-bin/ChangeLog | 8 +++- sci-biology/smalt-bin/Manifest | 2 +- sci-biology/smalt-bin/metadata.xml | 10 ++--- sci-biology/smalt-bin/smalt-bin-0.5.1.ebuild | 25 ------------ sci-biology/smalt-bin/smalt-bin-0.7.4.ebuild | 31 +++++++++++++++ sci-biology/ssaha2-bin/ChangeLog | 6 ++- sci-biology/ssaha2-bin/Manifest | 9 ++--- sci-biology/ssaha2-bin/metadata.xml | 10 ++--- ...a2-bin-2.5.3.ebuild => ssaha2-bin-2.5.5.ebuild} | 26 ++++++++----- sci-biology/twinscan/ChangeLog | 6 ++- sci-biology/twinscan/Manifest | 2 +- sci-biology/twinscan/metadata.xml | 10 ++--- sci-biology/twinscan/twinscan-4.1.2.ebuild | 30 ++++++++++----- 34 files changed, 292 insertions(+), 215 deletions(-) From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) by finch.gentoo.org (Postfix) with ESMTP id 48304138200 for ; Mon, 17 Jun 2013 05:56:20 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 667A7E0998; Mon, 17 Jun 2013 05:55:56 +0000 (UTC) Received: from smtp.gentoo.org (smtp.gentoo.org [140.211.166.183]) (using TLSv1 with cipher AECDH-AES256-SHA (256/256 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id 7345FE0995 for ; Mon, 17 Jun 2013 05:55:55 +0000 (UTC) Received: from hornbill.gentoo.org (hornbill.gentoo.org [94.100.119.163]) (using TLSv1 with cipher AECDH-AES256-SHA (256/256 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id 5933D33E558 for ; Mon, 17 Jun 2013 05:55:54 +0000 (UTC) Received: from localhost.localdomain (localhost [127.0.0.1]) by hornbill.gentoo.org (Postfix) with ESMTP id CF500E5463 for ; Mon, 17 Jun 2013 05:55:52 +0000 (UTC) From: "Justin Lecher" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Justin Lecher" Message-ID: <1371413932.e1e48799c623338fedab433347c64dfce9b9aebe.jlec@gentoo> Subject: [gentoo-commits] proj/sci:jlec commit in: / X-VCS-Repository: proj/sci X-VCS-Committer: jlec X-VCS-Committer-Name: Justin Lecher X-VCS-Revision: e1e48799c623338fedab433347c64dfce9b9aebe X-VCS-Branch: jlec Date: Mon, 17 Jun 2013 05:55:52 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Archives-Salt: d281808a-1f5c-4ffc-8983-1add86e231e2 X-Archives-Hash: 7d671f553514f0d2a52d048cfe2fd982 Message-ID: <20130617055552.4HWdcbTCZ55PDdUxBtKMGKiiViiENo52FaElDD0wfX0@z> commit: e1e48799c623338fedab433347c64dfce9b9aebe Author: Justin Lecher gentoo org> AuthorDate: Sun Jun 16 20:18:52 2013 +0000 Commit: Justin Lecher gentoo org> CommitDate: Sun Jun 16 20:18:52 2013 +0000 URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=e1e48799 Merge branch 'fixing' * fixing: sci-biology/twinscan: Bump to EAPI=5 and fix license sci-biology/ssaha2-bin: Version Bump; restrict license; add QA_PREBUILT for binaries sci-biology/smalt-bin: Version Bump; restrict license; add QA_PREBUILT for binaries sci-biology/sequin: Version BUmp; restrcit license; add QA_PREBUILT for binaries; install html files into sys path sci-biology/quicktree: Bump to EAPI=5 and fix license sci-biology/gap2caf: Bump to EAPI=5 and fix license; make it build with eautoreconf sci-biology/erpin: Bump to EAPI=5 and respect FLAGS / AR sci-biology/clover: Version BUmp; fixed license; respect LDFLAGS sci-biology/clover/ChangeLog | 6 ++- sci-biology/clover/Manifest | 4 +- sci-biology/clover/clover-2010.02.19.ebuild | 43 --------------------- sci-biology/clover/clover-2011.10.24.ebuild | 40 +++++++++++++++++++ sci-biology/clover/metadata.xml | 6 ++- sci-biology/erpin/ChangeLog | 5 ++- sci-biology/erpin/Manifest | 4 +- sci-biology/erpin/erpin-5.5b.ebuild | 23 ++++++----- sci-biology/erpin/metadata.xml | 10 ++--- sci-biology/gap2caf/ChangeLog | 8 ++++ sci-biology/gap2caf/Manifest | 4 +- sci-biology/gap2caf/gap2caf-2.1.0.ebuild | 45 +++++++++++----------- sci-biology/gap2caf/metadata.xml | 10 ++--- sci-biology/quicktree/ChangeLog | 6 ++- sci-biology/quicktree/Manifest | 2 +- sci-biology/quicktree/metadata.xml | 10 ++--- sci-biology/quicktree/quicktree-1.1-r1.ebuild | 17 ++++---- sci-biology/sequin/ChangeLog | 9 ++++- sci-biology/sequin/Manifest | 4 +- sci-biology/sequin/sequin-20090722.ebuild | 32 --------------- sci-biology/sequin/sequin-20121202.ebuild | 44 +++++++++++++++++++++ sci-biology/smalt-bin/ChangeLog | 8 +++- sci-biology/smalt-bin/Manifest | 2 +- sci-biology/smalt-bin/metadata.xml | 10 ++--- sci-biology/smalt-bin/smalt-bin-0.5.1.ebuild | 25 ------------ sci-biology/smalt-bin/smalt-bin-0.7.4.ebuild | 31 +++++++++++++++ sci-biology/ssaha2-bin/ChangeLog | 6 ++- sci-biology/ssaha2-bin/Manifest | 9 ++--- sci-biology/ssaha2-bin/metadata.xml | 10 ++--- ...a2-bin-2.5.3.ebuild => ssaha2-bin-2.5.5.ebuild} | 26 ++++++++----- sci-biology/twinscan/ChangeLog | 6 ++- sci-biology/twinscan/Manifest | 2 +- sci-biology/twinscan/metadata.xml | 10 ++--- sci-biology/twinscan/twinscan-4.1.2.ebuild | 30 ++++++++++----- 34 files changed, 292 insertions(+), 215 deletions(-) From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) by finch.gentoo.org (Postfix) with ESMTP id B46451381F3 for ; Sun, 16 Jun 2013 20:19:59 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 58A3BE09B7; Sun, 16 Jun 2013 20:19:07 +0000 (UTC) Received: from smtp.gentoo.org (smtp.gentoo.org [140.211.166.183]) (using TLSv1 with cipher AECDH-AES256-SHA (256/256 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id D9534E09B7 for ; Sun, 16 Jun 2013 20:19:06 +0000 (UTC) Received: from hornbill.gentoo.org (hornbill.gentoo.org [94.100.119.163]) (using TLSv1 with cipher AECDH-AES256-SHA (256/256 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id 9760133E3BF for ; Sun, 16 Jun 2013 20:19:05 +0000 (UTC) Received: from localhost.localdomain (localhost [127.0.0.1]) by hornbill.gentoo.org (Postfix) with ESMTP id 44839E468F for ; Sun, 16 Jun 2013 20:19:04 +0000 (UTC) From: "Justin Lecher" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Justin Lecher" Message-ID: <1371413932.e1e48799c623338fedab433347c64dfce9b9aebe.jlec@gentoo> Subject: [gentoo-commits] proj/sci:master commit in: / X-VCS-Repository: proj/sci X-VCS-Committer: jlec X-VCS-Committer-Name: Justin Lecher X-VCS-Revision: e1e48799c623338fedab433347c64dfce9b9aebe X-VCS-Branch: master Date: Sun, 16 Jun 2013 20:19:04 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Archives-Salt: c81de375-e378-4ab3-b03e-f8305acd356a X-Archives-Hash: ab1fb5ac7930cf7959979c1a7be742ff Message-ID: <20130616201904.iJ_OuJEghOAJRsxeqZasVC2RWDroP804gltq4bRIuFw@z> commit: e1e48799c623338fedab433347c64dfce9b9aebe Author: Justin Lecher gentoo org> AuthorDate: Sun Jun 16 20:18:52 2013 +0000 Commit: Justin Lecher gentoo org> CommitDate: Sun Jun 16 20:18:52 2013 +0000 URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=e1e48799 Merge branch 'fixing' * fixing: sci-biology/twinscan: Bump to EAPI=5 and fix license sci-biology/ssaha2-bin: Version Bump; restrict license; add QA_PREBUILT for binaries sci-biology/smalt-bin: Version Bump; restrict license; add QA_PREBUILT for binaries sci-biology/sequin: Version BUmp; restrcit license; add QA_PREBUILT for binaries; install html files into sys path sci-biology/quicktree: Bump to EAPI=5 and fix license sci-biology/gap2caf: Bump to EAPI=5 and fix license; make it build with eautoreconf sci-biology/erpin: Bump to EAPI=5 and respect FLAGS / AR sci-biology/clover: Version BUmp; fixed license; respect LDFLAGS sci-biology/clover/ChangeLog | 6 ++- sci-biology/clover/Manifest | 4 +- sci-biology/clover/clover-2010.02.19.ebuild | 43 --------------------- sci-biology/clover/clover-2011.10.24.ebuild | 40 +++++++++++++++++++ sci-biology/clover/metadata.xml | 6 ++- sci-biology/erpin/ChangeLog | 5 ++- sci-biology/erpin/Manifest | 4 +- sci-biology/erpin/erpin-5.5b.ebuild | 23 ++++++----- sci-biology/erpin/metadata.xml | 10 ++--- sci-biology/gap2caf/ChangeLog | 8 ++++ sci-biology/gap2caf/Manifest | 4 +- sci-biology/gap2caf/gap2caf-2.1.0.ebuild | 45 +++++++++++----------- sci-biology/gap2caf/metadata.xml | 10 ++--- sci-biology/quicktree/ChangeLog | 6 ++- sci-biology/quicktree/Manifest | 2 +- sci-biology/quicktree/metadata.xml | 10 ++--- sci-biology/quicktree/quicktree-1.1-r1.ebuild | 17 ++++---- sci-biology/sequin/ChangeLog | 9 ++++- sci-biology/sequin/Manifest | 4 +- sci-biology/sequin/sequin-20090722.ebuild | 32 --------------- sci-biology/sequin/sequin-20121202.ebuild | 44 +++++++++++++++++++++ sci-biology/smalt-bin/ChangeLog | 8 +++- sci-biology/smalt-bin/Manifest | 2 +- sci-biology/smalt-bin/metadata.xml | 10 ++--- sci-biology/smalt-bin/smalt-bin-0.5.1.ebuild | 25 ------------ sci-biology/smalt-bin/smalt-bin-0.7.4.ebuild | 31 +++++++++++++++ sci-biology/ssaha2-bin/ChangeLog | 6 ++- sci-biology/ssaha2-bin/Manifest | 9 ++--- sci-biology/ssaha2-bin/metadata.xml | 10 ++--- ...a2-bin-2.5.3.ebuild => ssaha2-bin-2.5.5.ebuild} | 26 ++++++++----- sci-biology/twinscan/ChangeLog | 6 ++- sci-biology/twinscan/Manifest | 2 +- sci-biology/twinscan/metadata.xml | 10 ++--- sci-biology/twinscan/twinscan-4.1.2.ebuild | 30 ++++++++++----- 34 files changed, 292 insertions(+), 215 deletions(-) From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) by finch.gentoo.org (Postfix) with ESMTP id 0658A1381F3 for ; Mon, 17 Jun 2013 05:55:50 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id D0F6FE0973; Mon, 17 Jun 2013 05:55:38 +0000 (UTC) Received: from smtp.gentoo.org (smtp.gentoo.org [140.211.166.183]) (using TLSv1 with cipher AECDH-AES256-SHA (256/256 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id 5556FE0973 for ; Mon, 17 Jun 2013 05:55:38 +0000 (UTC) Received: from hornbill.gentoo.org (hornbill.gentoo.org [94.100.119.163]) (using TLSv1 with cipher AECDH-AES256-SHA (256/256 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id 3E13933D8CC for ; Mon, 17 Jun 2013 05:55:37 +0000 (UTC) Received: from localhost.localdomain (localhost [127.0.0.1]) by hornbill.gentoo.org (Postfix) with ESMTP id E2F56E5461 for ; Mon, 17 Jun 2013 05:55:35 +0000 (UTC) From: "Justin Lecher" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Justin Lecher" Message-ID: <1371413932.e1e48799c623338fedab433347c64dfce9b9aebe.jlec@gentoo> Subject: [gentoo-commits] proj/sci:ccp4 commit in: / X-VCS-Repository: proj/sci X-VCS-Committer: jlec X-VCS-Committer-Name: Justin Lecher X-VCS-Revision: e1e48799c623338fedab433347c64dfce9b9aebe X-VCS-Branch: ccp4 Date: Mon, 17 Jun 2013 05:55:35 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Archives-Salt: d2ff93b8-3e58-46fb-88c1-a78fa05110b5 X-Archives-Hash: fc1217219ff4ca799aa012abd432734b Message-ID: <20130617055535.8RblOnOxoMyrCYARn8B8tMdUHF_BOJqkAeYHI6nr8SM@z> commit: e1e48799c623338fedab433347c64dfce9b9aebe Author: Justin Lecher gentoo org> AuthorDate: Sun Jun 16 20:18:52 2013 +0000 Commit: Justin Lecher gentoo org> CommitDate: Sun Jun 16 20:18:52 2013 +0000 URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=e1e48799 Merge branch 'fixing' * fixing: sci-biology/twinscan: Bump to EAPI=5 and fix license sci-biology/ssaha2-bin: Version Bump; restrict license; add QA_PREBUILT for binaries sci-biology/smalt-bin: Version Bump; restrict license; add QA_PREBUILT for binaries sci-biology/sequin: Version BUmp; restrcit license; add QA_PREBUILT for binaries; install html files into sys path sci-biology/quicktree: Bump to EAPI=5 and fix license sci-biology/gap2caf: Bump to EAPI=5 and fix license; make it build with eautoreconf sci-biology/erpin: Bump to EAPI=5 and respect FLAGS / AR sci-biology/clover: Version BUmp; fixed license; respect LDFLAGS sci-biology/clover/ChangeLog | 6 ++- sci-biology/clover/Manifest | 4 +- sci-biology/clover/clover-2010.02.19.ebuild | 43 --------------------- sci-biology/clover/clover-2011.10.24.ebuild | 40 +++++++++++++++++++ sci-biology/clover/metadata.xml | 6 ++- sci-biology/erpin/ChangeLog | 5 ++- sci-biology/erpin/Manifest | 4 +- sci-biology/erpin/erpin-5.5b.ebuild | 23 ++++++----- sci-biology/erpin/metadata.xml | 10 ++--- sci-biology/gap2caf/ChangeLog | 8 ++++ sci-biology/gap2caf/Manifest | 4 +- sci-biology/gap2caf/gap2caf-2.1.0.ebuild | 45 +++++++++++----------- sci-biology/gap2caf/metadata.xml | 10 ++--- sci-biology/quicktree/ChangeLog | 6 ++- sci-biology/quicktree/Manifest | 2 +- sci-biology/quicktree/metadata.xml | 10 ++--- sci-biology/quicktree/quicktree-1.1-r1.ebuild | 17 ++++---- sci-biology/sequin/ChangeLog | 9 ++++- sci-biology/sequin/Manifest | 4 +- sci-biology/sequin/sequin-20090722.ebuild | 32 --------------- sci-biology/sequin/sequin-20121202.ebuild | 44 +++++++++++++++++++++ sci-biology/smalt-bin/ChangeLog | 8 +++- sci-biology/smalt-bin/Manifest | 2 +- sci-biology/smalt-bin/metadata.xml | 10 ++--- sci-biology/smalt-bin/smalt-bin-0.5.1.ebuild | 25 ------------ sci-biology/smalt-bin/smalt-bin-0.7.4.ebuild | 31 +++++++++++++++ sci-biology/ssaha2-bin/ChangeLog | 6 ++- sci-biology/ssaha2-bin/Manifest | 9 ++--- sci-biology/ssaha2-bin/metadata.xml | 10 ++--- ...a2-bin-2.5.3.ebuild => ssaha2-bin-2.5.5.ebuild} | 26 ++++++++----- sci-biology/twinscan/ChangeLog | 6 ++- sci-biology/twinscan/Manifest | 2 +- sci-biology/twinscan/metadata.xml | 10 ++--- sci-biology/twinscan/twinscan-4.1.2.ebuild | 30 ++++++++++----- 34 files changed, 292 insertions(+), 215 deletions(-)