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Sun, 16 Jun 2013 20:19:02 +0000 (UTC) From: "Justin Lecher" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Justin Lecher" Message-ID: <1371411837.36032ab3249b80b8d49af5f05d86878dc7c4b7a4.jlec@gentoo> Subject: [gentoo-commits] proj/sci:fixing commit in: sci-biology/smalt-bin/ X-VCS-Repository: proj/sci X-VCS-Files: sci-biology/smalt-bin/ChangeLog sci-biology/smalt-bin/metadata.xml sci-biology/smalt-bin/smalt-bin-0.5.1.ebuild sci-biology/smalt-bin/smalt-bin-0.7.4.ebuild X-VCS-Directories: sci-biology/smalt-bin/ X-VCS-Committer: jlec X-VCS-Committer-Name: Justin Lecher X-VCS-Revision: 36032ab3249b80b8d49af5f05d86878dc7c4b7a4 X-VCS-Branch: fixing Date: Sun, 16 Jun 2013 20:19:02 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Archives-Salt: cdcefff3-99ca-438a-882d-ef4e55839d52 X-Archives-Hash: f79116de5881407eb2a44161b0cf6ff2 commit: 36032ab3249b80b8d49af5f05d86878dc7c4b7a4 Author: Justin Lecher gentoo org> AuthorDate: Sun Jun 16 19:43:57 2013 +0000 Commit: Justin Lecher gentoo org> CommitDate: Sun Jun 16 19:43:57 2013 +0000 URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=36032ab3 sci-biology/smalt-bin: Version Bump; restrict license; add QA_PREBUILT for binaries Package-Manager: portage-2.2.0_alpha180 --- sci-biology/smalt-bin/ChangeLog | 8 ++++++- sci-biology/smalt-bin/metadata.xml | 10 ++++----- sci-biology/smalt-bin/smalt-bin-0.5.1.ebuild | 25 ---------------------- sci-biology/smalt-bin/smalt-bin-0.7.4.ebuild | 31 ++++++++++++++++++++++++++++ 4 files changed, 43 insertions(+), 31 deletions(-) diff --git a/sci-biology/smalt-bin/ChangeLog b/sci-biology/smalt-bin/ChangeLog index f3268fd..7f6f91f 100644 --- a/sci-biology/smalt-bin/ChangeLog +++ b/sci-biology/smalt-bin/ChangeLog @@ -1,7 +1,13 @@ # ChangeLog for sci-biology/smalt-bin -# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2 +# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2 # $Header: $ +*smalt-bin-0.7.4 (16 Jun 2013) + + 16 Jun 2013; Justin Lecher -smalt-bin-0.5.1.ebuild, + +smalt-bin-0.7.4.ebuild, metadata.xml: + Version Bump; restrict license; add QA_PREBUILT for binaries + 25 Jun 2011; Justin Lecher smalt-bin-0.5.1.ebuild: Cleaned ebuild and fixed LICENSE diff --git a/sci-biology/smalt-bin/metadata.xml b/sci-biology/smalt-bin/metadata.xml index 07b5255..2bc8930 100644 --- a/sci-biology/smalt-bin/metadata.xml +++ b/sci-biology/smalt-bin/metadata.xml @@ -1,9 +1,9 @@ - sci-biology - - mmokrejs@fold.natur.cuni.cz - Martin Mokrejs - + sci-biology + + mmokrejs@fold.natur.cuni.cz + Martin Mokrejs + diff --git a/sci-biology/smalt-bin/smalt-bin-0.5.1.ebuild b/sci-biology/smalt-bin/smalt-bin-0.5.1.ebuild deleted file mode 100644 index 7566c20..0000000 --- a/sci-biology/smalt-bin/smalt-bin-0.5.1.ebuild +++ /dev/null @@ -1,25 +0,0 @@ -# Copyright 1999-2011 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: $ - -EAPI=4 - -DESCRIPTION="Pairwise sequence alignment mapping DNA reads onto genomic reference, better over SSAHA2" -HOMEPAGE="http://www.sanger.ac.uk/resources/software/smalt/" -SRC_URI="ftp://ftp.sanger.ac.uk/pub4/resources/software/smalt/smalt-"${PV}".tgz" - -LICENSE="as-is" -SLOT="0" -KEYWORDS="~x86 ~amd64" -IUSE="" - -S="${WORKDIR}"/smalt-"${PV}" - -src_install(){ - use x86 && newbin smalt_i386 smalt - use amd64 && newbin smalt_x86_64 smalt - use ia64 && newbin smalt_ia64 - - dodoc NEWS smalt_manual.pdf - doman smalt.1 -} diff --git a/sci-biology/smalt-bin/smalt-bin-0.7.4.ebuild b/sci-biology/smalt-bin/smalt-bin-0.7.4.ebuild new file mode 100644 index 0000000..01acc05 --- /dev/null +++ b/sci-biology/smalt-bin/smalt-bin-0.7.4.ebuild @@ -0,0 +1,31 @@ +# Copyright 1999-2013 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: $ + +EAPI=5 + +MY_PN="${PN%-bin}" +MY_P="${MY_PN}-${PV}" + +DESCRIPTION="Pairwise sequence alignment mapping DNA reads onto genomic reference, better over SSAHA2" +HOMEPAGE="http://www.sanger.ac.uk/resources/software/smalt/" +SRC_URI="ftp://ftp.sanger.ac.uk/pub4/resources/software/${MY_PN}/${MY_P}.tgz" + +LICENSE="all-rights-reserved" +SLOT="0" +KEYWORDS="~amd64 ~x86" +IUSE="" + +S="${WORKDIR}"/${MY_P} + +QA_PREBUILT="/opt/.*" + +src_install(){ + exeinto /opt/bin + use x86 && newexe ${MY_PN}_i386 ${MY_PN} + use amd64 && newexe ${MY_PN}_x86_64 ${MY_PN} + use ia64 && newexe ${MY_PN}_ia64 ${MY_PN} + + dodoc NEWS ${MY_PN}_manual.pdf + doman ${MY_PN}.1 +}