From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) by finch.gentoo.org (Postfix) with ESMTP id CE1CB1381F3 for ; Sun, 16 Jun 2013 20:20:06 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id A4145E09BA; Sun, 16 Jun 2013 20:19:10 +0000 (UTC) Received: from smtp.gentoo.org (smtp.gentoo.org [140.211.166.183]) (using TLSv1 with cipher AECDH-AES256-SHA (256/256 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id 1D1ADE09BA for ; Sun, 16 Jun 2013 20:19:05 +0000 (UTC) Received: from hornbill.gentoo.org (hornbill.gentoo.org [94.100.119.163]) (using TLSv1 with cipher AECDH-AES256-SHA (256/256 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id 08D4D33E34D for ; Sun, 16 Jun 2013 20:19:04 +0000 (UTC) Received: from localhost.localdomain (localhost [127.0.0.1]) by hornbill.gentoo.org (Postfix) with ESMTP id B11CAE5462 for ; Sun, 16 Jun 2013 20:19:02 +0000 (UTC) From: "Justin Lecher" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Justin Lecher" Message-ID: <1371411428.df7954eff9b2d068c2b899e702b15dc68846ded6.jlec@gentoo> Subject: [gentoo-commits] proj/sci:fixing commit in: sci-biology/sequin/ X-VCS-Repository: proj/sci X-VCS-Files: sci-biology/sequin/ChangeLog sci-biology/sequin/sequin-20090722.ebuild sci-biology/sequin/sequin-20121202.ebuild X-VCS-Directories: sci-biology/sequin/ X-VCS-Committer: jlec X-VCS-Committer-Name: Justin Lecher X-VCS-Revision: df7954eff9b2d068c2b899e702b15dc68846ded6 X-VCS-Branch: fixing Date: Sun, 16 Jun 2013 20:19:02 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Archives-Salt: 68d8d805-6c4a-4b97-bc56-05abe3877762 X-Archives-Hash: ce1f47188830dba7aa51c6edb99c388f commit: df7954eff9b2d068c2b899e702b15dc68846ded6 Author: Justin Lecher gentoo org> AuthorDate: Sun Jun 16 19:37:08 2013 +0000 Commit: Justin Lecher gentoo org> CommitDate: Sun Jun 16 19:37:08 2013 +0000 URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=df7954ef sci-biology/sequin: Version BUmp; restrcit license; add QA_PREBUILT for binaries; install html files into sys path Package-Manager: portage-2.2.0_alpha180 --- sci-biology/sequin/ChangeLog | 9 ++++++- sci-biology/sequin/sequin-20090722.ebuild | 32 ---------------------- sci-biology/sequin/sequin-20121202.ebuild | 44 +++++++++++++++++++++++++++++++ 3 files changed, 52 insertions(+), 33 deletions(-) diff --git a/sci-biology/sequin/ChangeLog b/sci-biology/sequin/ChangeLog index ca9c2b0..639b7c7 100644 --- a/sci-biology/sequin/ChangeLog +++ b/sci-biology/sequin/ChangeLog @@ -1,7 +1,14 @@ # ChangeLog for sci-biology/sequin -# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2 +# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2 # $Header: $ +*sequin-20121202 (16 Jun 2013) + + 16 Jun 2013; Justin Lecher -sequin-20090722.ebuild, + +sequin-20121202.ebuild: + Version BUmp; restrcit license; add QA_PREBUILT for binaries; install html + files into sys path + 25 Jun 2011; Justin Lecher metadata.xml: Fixed herd entry in metadata.xml diff --git a/sci-biology/sequin/sequin-20090722.ebuild b/sci-biology/sequin/sequin-20090722.ebuild deleted file mode 100644 index b1d4196..0000000 --- a/sci-biology/sequin/sequin-20090722.ebuild +++ /dev/null @@ -1,32 +0,0 @@ -# Copyright 1999-2009 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/clustalw/clustalw-2.0.12.ebuild,v 1.1 2009/10/18 21:14:11 weaver Exp $ - -EAPI=2 - -inherit eutils - -DESCRIPTION="A tool to facilitate submission of data to the GenBank, EMBL, and DDBJ sequence databases" -HOMEPAGE="http://www.ncbi.nlm.nih.gov/Sequin/" -SRC_URI="amd64? ( ftp://ftp.ncbi.nih.gov/sequin/old/${PV}/sequin.linux-x86_64.tar.gz -> ${P}-x86_64.tar.gz ) - x86? ( ftp://ftp.ncbi.nih.gov/sequin/old/${PV}/sequin.linux-x86.tar.gz -> ${P}-x86.tar.gz )" - -LICENSE="as-is" -SLOT="0" -KEYWORDS="~amd64 ~x86" -IUSE="" - -DEPEND="" -RDEPEND="x11-libs/libXmu - x11-libs/libXp" - -S="${WORKDIR}" - -src_install() { - insinto /opt/${PN} - doins -r * || die - exeinto /opt/${PN} - doexe sequin || die - dosym /opt/${PN}/sequin /usr/bin/sequin || die - make_desktop_entry sequin Sequin || die -} diff --git a/sci-biology/sequin/sequin-20121202.ebuild b/sci-biology/sequin/sequin-20121202.ebuild new file mode 100644 index 0000000..5e586dc --- /dev/null +++ b/sci-biology/sequin/sequin-20121202.ebuild @@ -0,0 +1,44 @@ +# Copyright 1999-2013 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/clustalw/clustalw-2.0.12.ebuild,v 1.1 2009/10/18 21:14:11 weaver Exp $ + +EAPI=5 + +inherit eutils + +DESCRIPTION="A tool to facilitate submission of data to the GenBank, EMBL, and DDBJ sequence databases" +HOMEPAGE="http://www.ncbi.nlm.nih.gov/Sequin/" +SRC_URI=" + amd64? ( ftp://ftp.ncbi.nih.gov/sequin/sequin.linux-x86_64.tar.gz -> ${P}-x86_64.tar.gz ) + x86? ( ftp://ftp.ncbi.nih.gov/sequin/sequin.linux.tar.gz -> ${P}-x86.tar.gz )" +# amd64? ( ftp://ftp.ncbi.nih.gov/sequin/old/${PV}/sequin.linux-x86_64.tar.gz -> ${P}-x86_64.tar.gz ) +# x86? ( ftp://ftp.ncbi.nih.gov/sequin/old/${PV}/sequin.linux-x86.tar.gz -> ${P}-x86.tar.gz )" + +LICENSE="all-rights-reserved" +SLOT="0" +KEYWORDS="~amd64 ~x86" +IUSE="" + +DEPEND="" +RDEPEND=" + x11-libs/libXmu + x11-libs/libXp" + +S="${WORKDIR}" + +QA_PREBUILT="/opt/.*" + +src_install() { + dohtml -r *htm images + rm -rf *htm images || die + + insinto /opt/${PN} + doins -r * + + exeinto /opt/${PN} + doexe sequin + + dosym /opt/${PN}/sequin /opt/bin/sequin + + make_desktop_entry sequin Sequin +}