[gentoo-commits] proj/sci:fixing commit in: sci-biology/sequin/

[gentoo-commits] proj/sci:fixing commit in: sci-biology/sequin/

[Justin Lecher]

commit:     df7954eff9b2d068c2b899e702b15dc68846ded6
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Sun Jun 16 19:37:08 2013 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Sun Jun 16 19:37:08 2013 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=df7954ef

sci-biology/sequin: Version BUmp; restrcit license; add QA_PREBUILT for binaries; install html files into sys path

Package-Manager: portage-2.2.0_alpha180

---
 sci-biology/sequin/ChangeLog              |  9 ++++++-
 sci-biology/sequin/sequin-20090722.ebuild | 32 ----------------------
 sci-biology/sequin/sequin-20121202.ebuild | 44 +++++++++++++++++++++++++++++++
 3 files changed, 52 insertions(+), 33 deletions(-)

diff --git a/sci-biology/sequin/ChangeLog b/sci-biology/sequin/ChangeLog
index ca9c2b0..639b7c7 100644
--- a/sci-biology/sequin/ChangeLog
+++ b/sci-biology/sequin/ChangeLog
@@ -1,7 +1,14 @@
 # ChangeLog for sci-biology/sequin
-# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
+# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+*sequin-20121202 (16 Jun 2013)
+
+  16 Jun 2013; Justin Lecher <jlec@gentoo.org> -sequin-20090722.ebuild,
+  +sequin-20121202.ebuild:
+  Version BUmp; restrcit license; add QA_PREBUILT for binaries; install html
+  files into sys path
+
   25 Jun 2011; Justin Lecher <jlec@gentoo.org> metadata.xml:
   Fixed herd entry in metadata.xml
 

diff --git a/sci-biology/sequin/sequin-20090722.ebuild b/sci-biology/sequin/sequin-20090722.ebuild
deleted file mode 100644
index b1d4196..0000000
--- a/sci-biology/sequin/sequin-20090722.ebuild
+++ /dev/null
@@ -1,32 +0,0 @@
-# Copyright 1999-2009 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/clustalw/clustalw-2.0.12.ebuild,v 1.1 2009/10/18 21:14:11 weaver Exp $
-
-EAPI=2
-
-inherit eutils
-
-DESCRIPTION="A tool to facilitate submission of data to the GenBank, EMBL, and DDBJ sequence databases"
-HOMEPAGE="http://www.ncbi.nlm.nih.gov/Sequin/"
-SRC_URI="amd64? ( ftp://ftp.ncbi.nih.gov/sequin/old/${PV}/sequin.linux-x86_64.tar.gz -> ${P}-x86_64.tar.gz )
-	x86? ( ftp://ftp.ncbi.nih.gov/sequin/old/${PV}/sequin.linux-x86.tar.gz -> ${P}-x86.tar.gz )"
-
-LICENSE="as-is"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE=""
-
-DEPEND=""
-RDEPEND="x11-libs/libXmu
-	x11-libs/libXp"
-
-S="${WORKDIR}"
-
-src_install() {
-	insinto /opt/${PN}
-	doins -r * || die
-	exeinto /opt/${PN}
-	doexe sequin || die
-	dosym /opt/${PN}/sequin /usr/bin/sequin || die
-	make_desktop_entry sequin Sequin || die
-}

diff --git a/sci-biology/sequin/sequin-20121202.ebuild b/sci-biology/sequin/sequin-20121202.ebuild
new file mode 100644
index 0000000..5e586dc
--- /dev/null
+++ b/sci-biology/sequin/sequin-20121202.ebuild
@@ -0,0 +1,44 @@
+# Copyright 1999-2013 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/clustalw/clustalw-2.0.12.ebuild,v 1.1 2009/10/18 21:14:11 weaver Exp $
+
+EAPI=5
+
+inherit eutils
+
+DESCRIPTION="A tool to facilitate submission of data to the GenBank, EMBL, and DDBJ sequence databases"
+HOMEPAGE="http://www.ncbi.nlm.nih.gov/Sequin/"
+SRC_URI="
+	amd64? ( ftp://ftp.ncbi.nih.gov/sequin/sequin.linux-x86_64.tar.gz -> ${P}-x86_64.tar.gz )
+	x86? ( ftp://ftp.ncbi.nih.gov/sequin/sequin.linux.tar.gz -> ${P}-x86.tar.gz )"
+#	amd64? ( ftp://ftp.ncbi.nih.gov/sequin/old/${PV}/sequin.linux-x86_64.tar.gz -> ${P}-x86_64.tar.gz )
+#	x86? ( ftp://ftp.ncbi.nih.gov/sequin/old/${PV}/sequin.linux-x86.tar.gz -> ${P}-x86.tar.gz )"
+
+LICENSE="all-rights-reserved"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+IUSE=""
+
+DEPEND=""
+RDEPEND="
+	x11-libs/libXmu
+	x11-libs/libXp"
+
+S="${WORKDIR}"
+
+QA_PREBUILT="/opt/.*"
+
+src_install() {
+	dohtml -r *htm images
+	rm -rf *htm images || die
+
+	insinto /opt/${PN}
+	doins -r *
+
+	exeinto /opt/${PN}
+	doexe sequin
+
+	dosym /opt/${PN}/sequin /opt/bin/sequin
+
+	make_desktop_entry sequin Sequin
+}