From: "Justin Lecher" <jlec@gentoo.org>
To: gentoo-commits@lists.gentoo.org
Subject: [gentoo-commits] proj/sci:fixing commit in: sci-biology/erpin/
Date: Sun, 16 Jun 2013 20:19:02 +0000 (UTC) [thread overview]
Message-ID: <1371410281.9e506aa5543ae1f1a782b63f201c756aa0ee5a7f.jlec@gentoo> (raw)
commit: 9e506aa5543ae1f1a782b63f201c756aa0ee5a7f
Author: Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Sun Jun 16 19:18:01 2013 +0000
Commit: Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Sun Jun 16 19:18:01 2013 +0000
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=9e506aa5
sci-biology/erpin: Bump to EAPI=5 and respect FLAGS / AR
Package-Manager: portage-2.2.0_alpha180
---
sci-biology/erpin/ChangeLog | 5 ++++-
sci-biology/erpin/erpin-5.5b.ebuild | 23 +++++++++++++----------
sci-biology/erpin/metadata.xml | 10 +++++-----
3 files changed, 22 insertions(+), 16 deletions(-)
diff --git a/sci-biology/erpin/ChangeLog b/sci-biology/erpin/ChangeLog
index f98fe95..de94a48 100644
--- a/sci-biology/erpin/ChangeLog
+++ b/sci-biology/erpin/ChangeLog
@@ -1,7 +1,10 @@
# ChangeLog for sci-biology/erpin
-# Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2
+# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+ 16 Jun 2013; Justin Lecher <jlec@gentoo.org> erpin-5.5b.ebuild, metadata.xml:
+ Bump to EAPI=5 and respect FLAGS / AR
+
23 Nov 2009; Andrey Kislyuk <weaver@gentoo.org> ChangeLog:
New package, ebuild written by me
diff --git a/sci-biology/erpin/erpin-5.5b.ebuild b/sci-biology/erpin/erpin-5.5b.ebuild
index 8aafe20..3673a32 100644
--- a/sci-biology/erpin/erpin-5.5b.ebuild
+++ b/sci-biology/erpin/erpin-5.5b.ebuild
@@ -1,8 +1,8 @@
-# Copyright 1999-2009 Gentoo Foundation
+# Copyright 1999-2013 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/sci-biology/bowtie/bowtie-0.10.1.ebuild,v 1.3 2009/09/22 11:43:28 maekke Exp $
-EAPI="2"
+EAPI=5
inherit toolchain-funcs
@@ -10,10 +10,11 @@ ERPIN_BATCH_V=1.4
DESCRIPTION="Easy RNA Profile IdentificatioN, an RNA motif search program"
HOMEPAGE="http://tagc.univ-mrs.fr/erpin/"
-SRC_URI="http://rna.igmors.u-psud.fr/download/Erpin/erpin${PV}.serv.tar.gz
+SRC_URI="
+ http://rna.igmors.u-psud.fr/download/Erpin/erpin${PV}.serv.tar.gz
http://rna.igmors.u-psud.fr/download/Erpin/ErpinBatch.${ERPIN_BATCH_V}.tar.gz"
-LICENSE="as-is"
+LICENSE="all-rights-reserved"
SLOT="0"
IUSE=""
KEYWORDS="~amd64 ~x86"
@@ -29,19 +30,21 @@ src_prepare() {
find -name '*.mk' | xargs sed -i \
-e 's/strip $@/echo skipping strip $@/' \
-e '/CFLAGS =/ d' \
- -e "s/CC = .*/CC = $(tc-getCC)/" || die
+ -e "s/CC = .*/CC = $(tc-getCC)/" \
+ -e "s: -o : ${LDFLAGS} -o :g" \
+ -e "s:ar :$(tc-getAR) :g" || die
sed -i 's/cc -O2/$(tc-getCC) ${CFLAGS}/' erpin${PV}.serv/sum/sum.mk || die
}
src_compile() {
- emake -C erpin${PV}.serv -f erpin.mk || die
+ emake -C erpin${PV}.serv -f erpin.mk
}
src_install() {
- dobin erpin${PV}.serv/bin/* || die
+ dobin erpin${PV}.serv/bin/*
insinto /usr/share/${PN}
- doins -r erpin${PV}.serv/scripts ErpinBatch.${ERPIN_BATCH_V} || die
+ doins -r erpin${PV}.serv/scripts ErpinBatch.${ERPIN_BATCH_V}
exeinto /usr/share/${PN}
- newexe "${FILESDIR}/erpincommand-${PV}.pl" erpincommand.pl || die
- dodoc erpin${PV}.serv/doc/doc*.pdf || die
+ newexe "${FILESDIR}/erpincommand-${PV}.pl" erpincommand
+ dodoc erpin${PV}.serv/doc/doc*.pdf
}
diff --git a/sci-biology/erpin/metadata.xml b/sci-biology/erpin/metadata.xml
index 3302123..fc7c769 100644
--- a/sci-biology/erpin/metadata.xml
+++ b/sci-biology/erpin/metadata.xml
@@ -1,9 +1,9 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer>
- <email>weaver@gentoo.org</email>
- <name>Andrey Kislyuk</name>
- </maintainer>
- <herd>sci-biology</herd>
+ <maintainer>
+ <email>weaver@gentoo.org</email>
+ <name>Andrey Kislyuk</name>
+ </maintainer>
+ <herd>sci-biology</herd>
</pkgmetadata>
reply other threads:[~2013-06-16 20:20 UTC|newest]
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