[gentoo-commits] proj/sci:master commit in: sci-biology/amos/

["Justin Lecher" <jlec@gentoo.org>]

commit:     78f3677f181e4c375599aa5656e08fc97557bc83
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Tue Mar 19 07:43:55 2013 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Tue Mar 19 07:43:55 2013 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=78f3677f

sci-biology/amos: Bump to latest git HEAD, fixes qt problems, #348031

Package-Manager: portage-2.2.0_alpha166

---
 sci-biology/amos/ChangeLog        |    3 ++
 sci-biology/amos/amos-9999.ebuild |   45 ++++++++----------------------------
 2 files changed, 13 insertions(+), 35 deletions(-)

diff --git a/sci-biology/amos/ChangeLog b/sci-biology/amos/ChangeLog
index 26c68ea..f121b16 100644
--- a/sci-biology/amos/ChangeLog
+++ b/sci-biology/amos/ChangeLog
@@ -2,6 +2,9 @@
 # Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+  19 Mar 2013; Justin Lecher <jlec@gentoo.org> amos-9999.ebuild:
+  Bump to latest git HEAD, fixes qt problems, #348031
+
   03 Mar 2013; Justin Lecher <jlec@gentoo.org> amos-9999.ebuild, metadata.xml:
   Update to new qt deps names
 

diff --git a/sci-biology/amos/amos-9999.ebuild b/sci-biology/amos/amos-9999.ebuild
index fc0e050..67180f8 100644
--- a/sci-biology/amos/amos-9999.ebuild
+++ b/sci-biology/amos/amos-9999.ebuild
@@ -2,52 +2,27 @@
 # Distributed under the terms of the GNU General Public License v2
 # $Header: $
 
-EAPI=4
+EAPI=5
 
-[ "$PV" == "9999" ] && CVS=cvs
+[ "$PV" == "9999" ] && VCS=git-2
 
-inherit eutils ${CVS}
+AUTOTOOLS_AUTORECONF=true
+
+inherit autotools-utils ${VCS}
 
 DESCRIPTION="Genome assembly package live cvs sources"
 HOMEPAGE="http://sourceforge.net/projects/amos"
-ECVS_SERVER="amos.cvs.sourceforge.net:/cvsroot/amos"
-ECVS_AUTH="pserver"
-ECVS_MODULE="AMOS"
-ECVS_BRANCH="HEAD"
-ECVS_USER="anonymous"
-ECVS_PASS=""
+SRC_URI=""
+EGIT_REPO_URI="git://amos.git.sourceforge.net/gitroot/amos/amos"
 
-LICENSE="GPL-2"
+LICENSE="Artistic"
 SLOT="0"
-IUSE=""
 KEYWORDS=""
+IUSE=""
 
 DEPEND="
 	dev-libs/boost
-	dev-qt/qt3support"
+	dev-qt/qtcore:4"
 RDEPEND="${DEPEND}
 		dev-perl/DBI
 		sci-biology/mummer"
-
-S="${DISTDIR}"/cvs-src/AMOS/AMOS/
-
-src_unpack() {
-	ECVS_TOP_DIR="${DISTDIR}/cvs-src/${ECVS_MODULE}"
-	cvs_src_unpack
-}
-
-src_prepare(){
-	epatch "${FILESDIR}"/amos.m4.patch
-}
-
-src_configure() {
-	./bootstrap || die
-	#CFLAGS=$CFLAGS' -I/usr/include/qt4/Qt' CXXFLAGS=$CXXFLAGS' -I/usr/include/qt4/Qt' econf --enable-all --with-Qt-include-dir=/usr/include/qt4 --with-Qt-lib-dir=/usr/lib/qt4 --with-Qt-bin-dir=/usr/bin --with-Qt-lib=Qt3Support
-	econf --enable-all
-	einfo "No hawkeye and other Qt3-based apps installed, sorry, no qt3 anynore on Gentoo"
-}
-
-src_compile() {
-	# TODO: force MAKEOPTS=-j1 because it seems -j6 is exploting some dependency issue in Makefiles
-	MAKEOPTS=-j1 emake DESTDIR="${D}"
-}