[gentoo-commits] proj/sci:master commit in: sci-chemistry/nmrpipe/, sci-chemistry/nmrpipe/files/

public inbox for gentoo-commits@lists.gentoo.org
 help / color / mirror / Atom feed

* [gentoo-commits] proj/sci:master commit in: sci-chemistry/nmrpipe/, sci-chemistry/nmrpipe/files/
@ 2011-02-26 12:53 Justin Lecher
  0 siblings, 0 replies; 22+ messages in thread
From: Justin Lecher @ 2011-02-26 12:53 UTC (permalink / raw
  To: gentoo-commits

commit:     3e238a646b183d2d507ef97bf79d9991a8c16cee
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Sat Feb 26 12:52:09 2011 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Sat Feb 26 12:52:09 2011 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=3e238a64

Version Bump

(Portage version: 2.2.0_alpha25/git/Linux x86_64, signed Manifest commit with key 70EB7916)

---
 sci-chemistry/nmrpipe/ChangeLog                    |    9 +++++++++
 ...0204-lib.patch => 5.5.2011.054.20.55-lib.patch} |    0
 ...04.ebuild => nmrpipe-5.5.2011.054.20.55.ebuild} |    0
 3 files changed, 9 insertions(+), 0 deletions(-)

diff --git a/sci-chemistry/nmrpipe/ChangeLog b/sci-chemistry/nmrpipe/ChangeLog
index c01bd22..6f298e5 100644
--- a/sci-chemistry/nmrpipe/ChangeLog
+++ b/sci-chemistry/nmrpipe/ChangeLog
@@ -4,6 +4,15 @@
 
 <<<<<<< HEAD
 
+*nmrpipe-5.5.2011.054.20.55 (26 Feb 2011)
+
+  26 Feb 2011; Justin Lecher <jlec@gentoo.org>
+  +files/5.5.2011.054.20.55-lib.patch,
+  -files/5.5.2011.004.17.58_p110204-lib.patch,
+  -nmrpipe-5.5.2011.004.17.58_p110204.ebuild,
+  +nmrpipe-5.5.2011.054.20.55.ebuild:
+  Version Bump
+
   07 Feb 2011; Justin Lecher <jlec@gentoo.org>
   -files/5.5.2011.004.17.58-lib.patch, -nmrpipe-5.5.2011.004.17.58-r2.ebuild,
   +nmrpipe-5.5.2011.004.17.58_p110204.ebuild,

diff --git a/sci-chemistry/nmrpipe/files/5.5.2011.004.17.58_p110204-lib.patch b/sci-chemistry/nmrpipe/files/5.5.2011.054.20.55-lib.patch
similarity index 100%
rename from sci-chemistry/nmrpipe/files/5.5.2011.004.17.58_p110204-lib.patch
rename to sci-chemistry/nmrpipe/files/5.5.2011.054.20.55-lib.patch

diff --git a/sci-chemistry/nmrpipe/nmrpipe-5.5.2011.004.17.58_p110204.ebuild b/sci-chemistry/nmrpipe/nmrpipe-5.5.2011.054.20.55.ebuild
similarity index 100%
rename from sci-chemistry/nmrpipe/nmrpipe-5.5.2011.004.17.58_p110204.ebuild
rename to sci-chemistry/nmrpipe/nmrpipe-5.5.2011.054.20.55.ebuild



^ permalink raw reply related	[flat|nested] 22+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-chemistry/nmrpipe/, sci-chemistry/nmrpipe/files/
@ 2011-03-11 17:44 Justin Lecher
  0 siblings, 0 replies; 22+ messages in thread
From: Justin Lecher @ 2011-03-11 17:44 UTC (permalink / raw
  To: gentoo-commits

commit:     31d7a6d6b34d873689fe315c5fc324528feb4b1b
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Fri Mar 11 17:44:26 2011 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Fri Mar 11 17:44:26 2011 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=31d7a6d6

Version Bump

(Portage version: 2.2.0_alpha26/git/Linux x86_64, signed Manifest commit with key 70EB7916)

---
 sci-chemistry/nmrpipe/ChangeLog                    |    7 +++++++
 ...0.55-lib.patch => 5.5.2011.069.19.56-lib.patch} |    0
 ...55.ebuild => nmrpipe-5.5.2011.069.19.56.ebuild} |    0
 3 files changed, 7 insertions(+), 0 deletions(-)

diff --git a/sci-chemistry/nmrpipe/ChangeLog b/sci-chemistry/nmrpipe/ChangeLog
index 9c68412..774cf38 100644
--- a/sci-chemistry/nmrpipe/ChangeLog
+++ b/sci-chemistry/nmrpipe/ChangeLog
@@ -2,6 +2,13 @@
 # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+*nmrpipe-5.5.2011.069.19.56 (11 Mar 2011)
+
+  11 Mar 2011; Justin Lecher <jlec@gentoo.org>
+  +files/5.5.2011.069.19.56-lib.patch, -files/5.5.2011.054.20.55-lib.patch,
+  -nmrpipe-5.5.2011.054.20.55.ebuild, +nmrpipe-5.5.2011.069.19.56.ebuild:
+  Version Bump
+
 *nmrpipe-5.5.2011.054.20.55 (26 Feb 2011)
 
   26 Feb 2011; Justin Lecher <jlec@gentoo.org>

diff --git a/sci-chemistry/nmrpipe/files/5.5.2011.054.20.55-lib.patch b/sci-chemistry/nmrpipe/files/5.5.2011.069.19.56-lib.patch
similarity index 100%
rename from sci-chemistry/nmrpipe/files/5.5.2011.054.20.55-lib.patch
rename to sci-chemistry/nmrpipe/files/5.5.2011.069.19.56-lib.patch

diff --git a/sci-chemistry/nmrpipe/nmrpipe-5.5.2011.054.20.55.ebuild b/sci-chemistry/nmrpipe/nmrpipe-5.5.2011.069.19.56.ebuild
similarity index 100%
rename from sci-chemistry/nmrpipe/nmrpipe-5.5.2011.054.20.55.ebuild
rename to sci-chemistry/nmrpipe/nmrpipe-5.5.2011.069.19.56.ebuild



^ permalink raw reply related	[flat|nested] 22+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-chemistry/nmrpipe/, sci-chemistry/nmrpipe/files/
@ 2011-04-04 11:18 Justin Lecher
  0 siblings, 0 replies; 22+ messages in thread
From: Justin Lecher @ 2011-04-04 11:18 UTC (permalink / raw
  To: gentoo-commits

commit:     bba7738ecbcd9b7d442a8290f6d427823551efae
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Fri Apr  1 12:22:29 2011 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Fri Apr  1 12:22:29 2011 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=bba7738e

Missing script dirs included

(Portage version: 2.2.0_alpha29/git/Linux x86_64, signed Manifest commit with key 70EB7916)

---
 sci-chemistry/nmrpipe/ChangeLog                    |    4 ++++
 sci-chemistry/nmrpipe/files/env-nmrpipe-new        |    2 +-
 .../nmrpipe/nmrpipe-5.5.2011.069.19.56.ebuild      |    2 +-
 3 files changed, 6 insertions(+), 2 deletions(-)

diff --git a/sci-chemistry/nmrpipe/ChangeLog b/sci-chemistry/nmrpipe/ChangeLog
index 774cf38..9a5668a 100644
--- a/sci-chemistry/nmrpipe/ChangeLog
+++ b/sci-chemistry/nmrpipe/ChangeLog
@@ -2,6 +2,10 @@
 # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+  01 Apr 2011; Justin Lecher <jlec@gentoo.org>
+  nmrpipe-5.5.2011.069.19.56.ebuild, files/env-nmrpipe-new:
+  Missing script dirs included
+
 *nmrpipe-5.5.2011.069.19.56 (11 Mar 2011)
 
   11 Mar 2011; Justin Lecher <jlec@gentoo.org>

diff --git a/sci-chemistry/nmrpipe/files/env-nmrpipe-new b/sci-chemistry/nmrpipe/files/env-nmrpipe-new
index b504aa1..87697f7 100644
--- a/sci-chemistry/nmrpipe/files/env-nmrpipe-new
+++ b/sci-chemistry/nmrpipe/files/env-nmrpipe-new
@@ -3,7 +3,7 @@ NMRCHECK="ALL"
 
 BINTYPE="linux9"
 NMRBINTYPE="linux9"
-PATH="/opt/nmrpipe/com:/opt/nmrpipe/bin:/opt/nmrpipe/dynamo/tcl"
+PATH="/opt/nmrpipe/com:/opt/nmrpipe/bin:/opt/nmrpipe/dynamo/tcl:/opt/nmrpipe/talosplus/com:/opt/nmrpipe/dynamo/com"
 
 # NMRPipe
 NMRBASE="/opt/nmrpipe"

diff --git a/sci-chemistry/nmrpipe/nmrpipe-5.5.2011.069.19.56.ebuild b/sci-chemistry/nmrpipe/nmrpipe-5.5.2011.069.19.56.ebuild
index 9965e8e..6ecb332 100644
--- a/sci-chemistry/nmrpipe/nmrpipe-5.5.2011.069.19.56.ebuild
+++ b/sci-chemistry/nmrpipe/nmrpipe-5.5.2011.069.19.56.ebuild
@@ -130,7 +130,7 @@ src_install() {
 	rm -f {talos*,spartaplus,promega}/bin/*{linux,mac,sgi6x,winxp} pdb/misc/addSeg || die
 
 	# Set the correct path to NMRPipe in the auxiliary scripts.
-	for i in $(find com/ dynamo/surface/misc/ nmrtxt/ talos/misc talosplus/com -type f); do
+	for i in $(find com/ dynamo/surface/misc/ nmrtxt/ talos/misc talosplus/com spartaplus/com -type f); do
 		sed -e "s%/u/delaglio%${ENMRBASE}%" -i ${i} || die \
 			"Failed patching scripts."
 	done



^ permalink raw reply related	[flat|nested] 22+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-chemistry/nmrpipe/, sci-chemistry/nmrpipe/files/
@ 2011-04-28  7:50 Justin Lecher
  0 siblings, 0 replies; 22+ messages in thread
From: Justin Lecher @ 2011-04-28  7:50 UTC (permalink / raw
  To: gentoo-commits

commit:     69c8297c100f06c2c19dc0385cc189e7bff04735
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Thu Apr 28 07:47:02 2011 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Thu Apr 28 07:47:02 2011 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=69c8297c

Version Bump, Minor corrects to fullfil repoman QA

(Portage version: 2.2.0_alpha30/git/Linux x86_64, signed Manifest commit with key 70EB7916)

---
 sci-chemistry/nmrpipe/ChangeLog                    |    7 +++++++
 ...9.56-lib.patch => 5.8.2011.108.15.55-lib.patch} |    0
 ...56.ebuild => nmrpipe-5.8.2011.108.15.55.ebuild} |    4 +++-
 3 files changed, 10 insertions(+), 1 deletions(-)

diff --git a/sci-chemistry/nmrpipe/ChangeLog b/sci-chemistry/nmrpipe/ChangeLog
index 9a5668a..f873924 100644
--- a/sci-chemistry/nmrpipe/ChangeLog
+++ b/sci-chemistry/nmrpipe/ChangeLog
@@ -2,6 +2,13 @@
 # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+*nmrpipe-5.8.2011.108.15.55 (28 Apr 2011)
+
+  28 Apr 2011; Justin Lecher <jlec@gentoo.org>
+  +files/5.8.2011.108.15.55-lib.patch, -files/5.5.2011.069.19.56-lib.patch,
+  -nmrpipe-5.5.2011.069.19.56.ebuild, +nmrpipe-5.8.2011.108.15.55.ebuild:
+  Version Bump, Minor corrects to fullfil repoman QA
+
   01 Apr 2011; Justin Lecher <jlec@gentoo.org>
   nmrpipe-5.5.2011.069.19.56.ebuild, files/env-nmrpipe-new:
   Missing script dirs included

diff --git a/sci-chemistry/nmrpipe/files/5.5.2011.069.19.56-lib.patch b/sci-chemistry/nmrpipe/files/5.8.2011.108.15.55-lib.patch
similarity index 100%
rename from sci-chemistry/nmrpipe/files/5.5.2011.069.19.56-lib.patch
rename to sci-chemistry/nmrpipe/files/5.8.2011.108.15.55-lib.patch

diff --git a/sci-chemistry/nmrpipe/nmrpipe-5.5.2011.069.19.56.ebuild b/sci-chemistry/nmrpipe/nmrpipe-5.8.2011.108.15.55.ebuild
similarity index 98%
rename from sci-chemistry/nmrpipe/nmrpipe-5.5.2011.069.19.56.ebuild
rename to sci-chemistry/nmrpipe/nmrpipe-5.8.2011.108.15.55.ebuild
index 6ecb332..705e4e3 100644
--- a/sci-chemistry/nmrpipe/nmrpipe-5.5.2011.069.19.56.ebuild
+++ b/sci-chemistry/nmrpipe/nmrpipe-5.8.2011.108.15.55.ebuild
@@ -51,6 +51,8 @@ S="${WORKDIR}"
 NMRBASE="/opt/${PN}"
 ENMRBASE="${EPREFIX}/${NMRBASE}"
 
+QA_DT_HASH_amd64="opt/nmrpipe/nmrbin.linux9/lib/.*"
+
 pkg_nofetch() {
 	einfo "Please visit:"
 	einfo "\t${HOMEPAGE}"
@@ -130,7 +132,7 @@ src_install() {
 	rm -f {talos*,spartaplus,promega}/bin/*{linux,mac,sgi6x,winxp} pdb/misc/addSeg || die
 
 	# Set the correct path to NMRPipe in the auxiliary scripts.
-	for i in $(find com/ dynamo/surface/misc/ nmrtxt/ talos/misc talosplus/com spartaplus/com -type f); do
+	for i in $(find com/ dynamo/surface/misc/ nmrtxt/ talos/misc talosplus/com -type f); do
 		sed -e "s%/u/delaglio%${ENMRBASE}%" -i ${i} || die \
 			"Failed patching scripts."
 	done



^ permalink raw reply related	[flat|nested] 22+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-chemistry/nmrpipe/, sci-chemistry/nmrpipe/files/
@ 2011-04-29 10:05 Justin Lecher
  0 siblings, 0 replies; 22+ messages in thread
From: Justin Lecher @ 2011-04-29 10:05 UTC (permalink / raw
  To: gentoo-commits

commit:     aa0f513a03f4280d85715fec8dd509dfbc7c9b78
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Fri Apr 29 10:02:03 2011 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Fri Apr 29 10:02:03 2011 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=aa0f513a

Version BUmp

(Portage version: 2.2.0_alpha30/git/Linux x86_64, signed Manifest commit with key 70EB7916)

---
 sci-chemistry/nmrpipe/ChangeLog                    |    7 +++++++
 ...5.55-lib.patch => 5.8.2011.117.18.42-lib.patch} |    0
 ...55.ebuild => nmrpipe-5.8.2011.117.18.42.ebuild} |    0
 3 files changed, 7 insertions(+), 0 deletions(-)

diff --git a/sci-chemistry/nmrpipe/ChangeLog b/sci-chemistry/nmrpipe/ChangeLog
index f873924..4a02795 100644
--- a/sci-chemistry/nmrpipe/ChangeLog
+++ b/sci-chemistry/nmrpipe/ChangeLog
@@ -2,6 +2,13 @@
 # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+*nmrpipe-5.8.2011.117.18.42 (29 Apr 2011)
+
+  29 Apr 2011; Justin Lecher <jlec@gentoo.org>
+  +files/5.8.2011.117.18.42-lib.patch, -files/5.8.2011.108.15.55-lib.patch,
+  -nmrpipe-5.8.2011.108.15.55.ebuild, +nmrpipe-5.8.2011.117.18.42.ebuild:
+  Version BUmp
+
 *nmrpipe-5.8.2011.108.15.55 (28 Apr 2011)
 
   28 Apr 2011; Justin Lecher <jlec@gentoo.org>

diff --git a/sci-chemistry/nmrpipe/files/5.8.2011.108.15.55-lib.patch b/sci-chemistry/nmrpipe/files/5.8.2011.117.18.42-lib.patch
similarity index 100%
rename from sci-chemistry/nmrpipe/files/5.8.2011.108.15.55-lib.patch
rename to sci-chemistry/nmrpipe/files/5.8.2011.117.18.42-lib.patch

diff --git a/sci-chemistry/nmrpipe/nmrpipe-5.8.2011.108.15.55.ebuild b/sci-chemistry/nmrpipe/nmrpipe-5.8.2011.117.18.42.ebuild
similarity index 100%
rename from sci-chemistry/nmrpipe/nmrpipe-5.8.2011.108.15.55.ebuild
rename to sci-chemistry/nmrpipe/nmrpipe-5.8.2011.117.18.42.ebuild



^ permalink raw reply related	[flat|nested] 22+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-chemistry/nmrpipe/, sci-chemistry/nmrpipe/files/
@ 2011-05-28  7:49 Justin Lecher
  0 siblings, 0 replies; 22+ messages in thread
From: Justin Lecher @ 2011-05-28  7:49 UTC (permalink / raw
  To: gentoo-commits

commit:     a1590fae01c8a71f581571a6f32ef1410b8c1f32
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Fri May 20 09:03:26 2011 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Fri May 20 09:03:26 2011 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=a1590fae

Version Bump

(Portage version: 2.2.0_alpha34/git/Linux x86_64, signed Manifest commit with key 70EB7916)

---
 sci-chemistry/nmrpipe/ChangeLog                    |    7 +++++++
 ....42-lib.patch => 5.91.2011.138.14.57-lib.patch} |    0
 ...2.ebuild => nmrpipe-5.91.2011.138.14.57.ebuild} |    0
 3 files changed, 7 insertions(+), 0 deletions(-)

diff --git a/sci-chemistry/nmrpipe/ChangeLog b/sci-chemistry/nmrpipe/ChangeLog
index 4a02795..fc4beb3 100644
--- a/sci-chemistry/nmrpipe/ChangeLog
+++ b/sci-chemistry/nmrpipe/ChangeLog
@@ -2,6 +2,13 @@
 # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+*nmrpipe-5.91.2011.138.14.57 (20 May 2011)
+
+  20 May 2011; Justin Lecher <jlec@gentoo.org>
+  +files/5.91.2011.138.14.57-lib.patch, -files/5.8.2011.117.18.42-lib.patch,
+  -nmrpipe-5.8.2011.117.18.42.ebuild, +nmrpipe-5.91.2011.138.14.57.ebuild:
+  Version Bump
+
 *nmrpipe-5.8.2011.117.18.42 (29 Apr 2011)
 
   29 Apr 2011; Justin Lecher <jlec@gentoo.org>

diff --git a/sci-chemistry/nmrpipe/files/5.8.2011.117.18.42-lib.patch b/sci-chemistry/nmrpipe/files/5.91.2011.138.14.57-lib.patch
similarity index 100%
rename from sci-chemistry/nmrpipe/files/5.8.2011.117.18.42-lib.patch
rename to sci-chemistry/nmrpipe/files/5.91.2011.138.14.57-lib.patch

diff --git a/sci-chemistry/nmrpipe/nmrpipe-5.8.2011.117.18.42.ebuild b/sci-chemistry/nmrpipe/nmrpipe-5.91.2011.138.14.57.ebuild
similarity index 100%
rename from sci-chemistry/nmrpipe/nmrpipe-5.8.2011.117.18.42.ebuild
rename to sci-chemistry/nmrpipe/nmrpipe-5.91.2011.138.14.57.ebuild



^ permalink raw reply related	[flat|nested] 22+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-chemistry/nmrpipe/, sci-chemistry/nmrpipe/files/
@ 2011-06-20  5:20 Justin Lecher
  0 siblings, 0 replies; 22+ messages in thread
From: Justin Lecher @ 2011-06-20  5:20 UTC (permalink / raw
  To: gentoo-commits

commit:     915acd7c2bb71ea46a252be01e7655a80c8cd207
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Sat Jun 18 14:46:29 2011 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Sat Jun 18 14:46:29 2011 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=915acd7c

Version BUmp, added missing die

(Portage version: 2.2.0_alpha41/git/Linux x86_64, signed Manifest commit with key 70EB7916)

---
 sci-chemistry/nmrpipe/ChangeLog                    |    7 +++++++
 ....57-lib.patch => 5.91.2011.167.16.39-lib.patch} |    0
 ...7.ebuild => nmrpipe-5.91.2011.167.16.39.ebuild} |    2 +-
 3 files changed, 8 insertions(+), 1 deletions(-)

diff --git a/sci-chemistry/nmrpipe/ChangeLog b/sci-chemistry/nmrpipe/ChangeLog
index fc4beb3..6a0a362 100644
--- a/sci-chemistry/nmrpipe/ChangeLog
+++ b/sci-chemistry/nmrpipe/ChangeLog
@@ -2,6 +2,13 @@
 # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+*nmrpipe-5.91.2011.167.16.39 (18 Jun 2011)
+
+  18 Jun 2011; Justin Lecher <jlec@gentoo.org>
+  +files/5.91.2011.167.16.39-lib.patch, -files/5.91.2011.138.14.57-lib.patch,
+  -nmrpipe-5.91.2011.138.14.57.ebuild, +nmrpipe-5.91.2011.167.16.39.ebuild:
+  Version BUmp, added missing die
+
 *nmrpipe-5.91.2011.138.14.57 (20 May 2011)
 
   20 May 2011; Justin Lecher <jlec@gentoo.org>

diff --git a/sci-chemistry/nmrpipe/files/5.91.2011.138.14.57-lib.patch b/sci-chemistry/nmrpipe/files/5.91.2011.167.16.39-lib.patch
similarity index 100%
rename from sci-chemistry/nmrpipe/files/5.91.2011.138.14.57-lib.patch
rename to sci-chemistry/nmrpipe/files/5.91.2011.167.16.39-lib.patch

diff --git a/sci-chemistry/nmrpipe/nmrpipe-5.91.2011.138.14.57.ebuild b/sci-chemistry/nmrpipe/nmrpipe-5.91.2011.167.16.39.ebuild
similarity index 99%
rename from sci-chemistry/nmrpipe/nmrpipe-5.91.2011.138.14.57.ebuild
rename to sci-chemistry/nmrpipe/nmrpipe-5.91.2011.167.16.39.ebuild
index 705e4e3..4c191d9 100644
--- a/sci-chemistry/nmrpipe/nmrpipe-5.91.2011.138.14.57.ebuild
+++ b/sci-chemistry/nmrpipe/nmrpipe-5.91.2011.167.16.39.ebuild
@@ -141,7 +141,7 @@ src_install() {
 	sed \
 		-e "s:/opt/nmrpipe:${EPREFIX}/opt/nmrpipe:g" \
 		"${FILESDIR}"/env-${PN}-new \
-		> env-${PN}-new
+		> env-${PN}-new || die
 	newenvd env-${PN}-new 40${PN} || die "Failed to install env file."
 
 	# PREFIX stuff



^ permalink raw reply related	[flat|nested] 22+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-chemistry/nmrpipe/, sci-chemistry/nmrpipe/files/
@ 2011-07-06 13:35 Justin Lecher
  0 siblings, 0 replies; 22+ messages in thread
From: Justin Lecher @ 2011-07-06 13:35 UTC (permalink / raw
  To: gentoo-commits

commit:     d715ab9d4bc90a92b61224106910c041f9add2d5
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Wed Jul  6 13:29:28 2011 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Wed Jul  6 13:29:28 2011 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=d715ab9d

Version Bump

(Portage version: 2.2.0_alpha43/git/Linux x86_64, signed Manifest commit with key 70EB7916)

---
 sci-chemistry/nmrpipe/ChangeLog                    |    8 ++++++++
 ....39-lib.patch => 5.95.2011.186.16.48-lib.patch} |    0
 sci-chemistry/nmrpipe/metadata.xml                 |    1 -
 ...9.ebuild => nmrpipe-5.95.2011.186.16.48.ebuild} |    0
 4 files changed, 8 insertions(+), 1 deletions(-)

diff --git a/sci-chemistry/nmrpipe/ChangeLog b/sci-chemistry/nmrpipe/ChangeLog
index 6a0a362..f0485d4 100644
--- a/sci-chemistry/nmrpipe/ChangeLog
+++ b/sci-chemistry/nmrpipe/ChangeLog
@@ -2,6 +2,14 @@
 # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+*nmrpipe-5.95.2011.186.16.48 (06 Jul 2011)
+
+  06 Jul 2011; Justin Lecher <jlec@gentoo.org>
+  -files/5.91.2011.167.16.39-lib.patch, -nmrpipe-5.91.2011.167.16.39.ebuild,
+  +nmrpipe-5.95.2011.186.16.48.ebuild, +files/5.95.2011.186.16.48-lib.patch,
+  metadata.xml:
+  Version Bump
+
 *nmrpipe-5.91.2011.167.16.39 (18 Jun 2011)
 
   18 Jun 2011; Justin Lecher <jlec@gentoo.org>

diff --git a/sci-chemistry/nmrpipe/files/5.91.2011.167.16.39-lib.patch b/sci-chemistry/nmrpipe/files/5.95.2011.186.16.48-lib.patch
similarity index 100%
rename from sci-chemistry/nmrpipe/files/5.91.2011.167.16.39-lib.patch
rename to sci-chemistry/nmrpipe/files/5.95.2011.186.16.48-lib.patch

diff --git a/sci-chemistry/nmrpipe/metadata.xml b/sci-chemistry/nmrpipe/metadata.xml
index 8487320..04b998a 100644
--- a/sci-chemistry/nmrpipe/metadata.xml
+++ b/sci-chemistry/nmrpipe/metadata.xml
@@ -7,4 +7,3 @@
 		<name>Justin Lecher</name>
 	</maintainer>
 </pkgmetadata>
-

diff --git a/sci-chemistry/nmrpipe/nmrpipe-5.91.2011.167.16.39.ebuild b/sci-chemistry/nmrpipe/nmrpipe-5.95.2011.186.16.48.ebuild
similarity index 100%
rename from sci-chemistry/nmrpipe/nmrpipe-5.91.2011.167.16.39.ebuild
rename to sci-chemistry/nmrpipe/nmrpipe-5.95.2011.186.16.48.ebuild



^ permalink raw reply related	[flat|nested] 22+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-chemistry/nmrpipe/, sci-chemistry/nmrpipe/files/
@ 2011-08-31 10:05 Justin Lecher
  0 siblings, 0 replies; 22+ messages in thread
From: Justin Lecher @ 2011-08-31 10:05 UTC (permalink / raw
  To: gentoo-commits

commit:     739588fee7b5faa7954ebad6014f0eab2611532c
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Wed Aug 31 10:05:04 2011 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Wed Aug 31 10:05:04 2011 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=739588fe

Version Bump

(Portage version: 2.2.0_alpha51/git/Linux x86_64, RepoMan options: --force, signed Manifest commit with key 70EB7916)

---
 sci-chemistry/nmrpipe/ChangeLog                    |   17 +++++++++++++++++
 ....48-lib.patch => 5.99.2011.242.16.23-lib.patch} |    0
 ...8.ebuild => nmrpipe-5.99.2011.242.16.23.ebuild} |    3 +--
 3 files changed, 18 insertions(+), 2 deletions(-)

diff --git a/sci-chemistry/nmrpipe/ChangeLog b/sci-chemistry/nmrpipe/ChangeLog
index f0485d4..0326c36 100644
--- a/sci-chemistry/nmrpipe/ChangeLog
+++ b/sci-chemistry/nmrpipe/ChangeLog
@@ -2,6 +2,23 @@
 # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+  31 Aug 2011; Justin Lecher <jlec@gentoo.org>
+  +files/5.99.2011.242.16.23-lib.patch, -files/5.95.2011.186.16.48-lib.patch,
+  -nmrpipe-5.95.2011.186.16.48.ebuild, +nmrpipe-5.99.2011.242.16.23.ebuild:
+  Version Bump
+
+  31 Aug 2011; Justin Lecher <jlec@gentoo.org>
+  +files/5.99.2011.242.16.23-lib.patch, -files/5.95.2011.186.16.48-lib.patch,
+  -nmrpipe-5.95.2011.186.16.48.ebuild, +nmrpipe-5.99.2011.242.16.23.ebuild:
+  Version Bump
+
+*nmrpipe-5.99.2011.242.16.23 (31 Aug 2011)
+
+  31 Aug 2011; Justin Lecher <jlec@gentoo.org>
+  +files/5.99.2011.242.16.23-lib.patch, -files/5.95.2011.186.16.48-lib.patch,
+  -nmrpipe-5.95.2011.186.16.48.ebuild, +nmrpipe-5.99.2011.242.16.23.ebuild:
+  Version Bump
+
 *nmrpipe-5.95.2011.186.16.48 (06 Jul 2011)
 
   06 Jul 2011; Justin Lecher <jlec@gentoo.org>

diff --git a/sci-chemistry/nmrpipe/files/5.95.2011.186.16.48-lib.patch b/sci-chemistry/nmrpipe/files/5.99.2011.242.16.23-lib.patch
similarity index 100%
rename from sci-chemistry/nmrpipe/files/5.95.2011.186.16.48-lib.patch
rename to sci-chemistry/nmrpipe/files/5.99.2011.242.16.23-lib.patch

diff --git a/sci-chemistry/nmrpipe/nmrpipe-5.95.2011.186.16.48.ebuild b/sci-chemistry/nmrpipe/nmrpipe-5.99.2011.242.16.23.ebuild
similarity index 99%
rename from sci-chemistry/nmrpipe/nmrpipe-5.95.2011.186.16.48.ebuild
rename to sci-chemistry/nmrpipe/nmrpipe-5.99.2011.242.16.23.ebuild
index 4c191d9..b5db875 100644
--- a/sci-chemistry/nmrpipe/nmrpipe-5.95.2011.186.16.48.ebuild
+++ b/sci-chemistry/nmrpipe/nmrpipe-5.99.2011.242.16.23.ebuild
@@ -73,10 +73,9 @@ src_unpack() {
 		ln -s "${DISTDIR}"/${i} ${i}
 	done
 	# ... copy the installation scripts ...
-	cp "${DISTDIR}"/{binval.com,install.com} .
+	cp -L "${DISTDIR}"/{binval.com,install.com} .
 	# ... and make the installation scripts executable.
 	chmod +x binval.com install.com
-
 	# Unset DISPLAY to avoid the interactive graphical test.
 	# This just unpacks the stuff
 	env DISPLAY="" csh ./install.com +type linux9 +dest "${S}"/NMR || die



^ permalink raw reply related	[flat|nested] 22+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-chemistry/nmrpipe/, sci-chemistry/nmrpipe/files/
@ 2011-11-11 11:26 Justin Lecher
  0 siblings, 0 replies; 22+ messages in thread
From: Justin Lecher @ 2011-11-11 11:26 UTC (permalink / raw
  To: gentoo-commits

commit:     f9696d43c35af39a4bee97caff12a30e6287ca99
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Fri Nov 11 11:26:28 2011 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Fri Nov 11 11:26:28 2011 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=f9696d43

Version Bump

(Portage version: 2.2.0_alpha73/git/Linux x86_64, RepoMan options: --force, signed Manifest commit with key 70EB7916)

---
 sci-chemistry/nmrpipe/ChangeLog                    |   12 ++++++++++++
 ...6.23-lib.patch => 6.0.2011.286.17.18-lib.patch} |    0
 ...23.ebuild => nmrpipe-6.0.2011.286.17.18.ebuild} |    0
 3 files changed, 12 insertions(+), 0 deletions(-)

diff --git a/sci-chemistry/nmrpipe/ChangeLog b/sci-chemistry/nmrpipe/ChangeLog
index cef3e0a..7f355c6 100644
--- a/sci-chemistry/nmrpipe/ChangeLog
+++ b/sci-chemistry/nmrpipe/ChangeLog
@@ -2,6 +2,18 @@
 # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+  11 Nov 2011; Justin Lecher <jlec@gentoo.org>
+  +files/6.0.2011.286.17.18-lib.patch, -files/5.99.2011.242.16.23-lib.patch,
+  -nmrpipe-5.99.2011.242.16.23.ebuild, +nmrpipe-6.0.2011.286.17.18.ebuild:
+  Version Bump
+
+*nmrpipe-6.0.2011.286.17.18 (11 Nov 2011)
+
+  11 Nov 2011; Justin Lecher <jlec@gentoo.org>
+  +files/6.0.2011.286.17.18-lib.patch, -files/5.99.2011.242.16.23-lib.patch,
+  -nmrpipe-5.99.2011.242.16.23.ebuild, +nmrpipe-6.0.2011.286.17.18.ebuild:
+  Version Bump
+
   05 Oct 2011; Justin Lecher <jlec@gentoo.org>
   nmrpipe-5.99.2011.242.16.23.ebuild:
   Use virtualx.eclass

diff --git a/sci-chemistry/nmrpipe/files/5.99.2011.242.16.23-lib.patch b/sci-chemistry/nmrpipe/files/6.0.2011.286.17.18-lib.patch
similarity index 100%
rename from sci-chemistry/nmrpipe/files/5.99.2011.242.16.23-lib.patch
rename to sci-chemistry/nmrpipe/files/6.0.2011.286.17.18-lib.patch

diff --git a/sci-chemistry/nmrpipe/nmrpipe-5.99.2011.242.16.23.ebuild b/sci-chemistry/nmrpipe/nmrpipe-6.0.2011.286.17.18.ebuild
similarity index 100%
rename from sci-chemistry/nmrpipe/nmrpipe-5.99.2011.242.16.23.ebuild
rename to sci-chemistry/nmrpipe/nmrpipe-6.0.2011.286.17.18.ebuild



^ permalink raw reply related	[flat|nested] 22+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-chemistry/nmrpipe/, sci-chemistry/nmrpipe/files/
@ 2011-12-06 16:35 Justin Lecher
  0 siblings, 0 replies; 22+ messages in thread
From: Justin Lecher @ 2011-12-06 16:35 UTC (permalink / raw
  To: gentoo-commits

commit:     ad3d486486c09a679da687a9e985c48d56c10273
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Tue Dec  6 16:33:32 2011 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Tue Dec  6 16:33:32 2011 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=ad3d4864

Version Bump

(Portage version: 2.2.0_alpha79/git/Linux x86_64, RepoMan options: --force, signed Manifest commit with key 70EB7916)

---
 sci-chemistry/nmrpipe/ChangeLog                    |   12 ++++++++++++
 ...7.18-lib.patch => 6.2.2011.314.15.12-lib.patch} |    0
 ...18.ebuild => nmrpipe-6.2.2011.314.15.12.ebuild} |    0
 3 files changed, 12 insertions(+), 0 deletions(-)

diff --git a/sci-chemistry/nmrpipe/ChangeLog b/sci-chemistry/nmrpipe/ChangeLog
index 7f355c6..2a60ee2 100644
--- a/sci-chemistry/nmrpipe/ChangeLog
+++ b/sci-chemistry/nmrpipe/ChangeLog
@@ -2,6 +2,18 @@
 # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+  06 Dec 2011; Justin Lecher <jlec@gentoo.org>
+  +files/6.2.2011.314.15.12-lib.patch, -files/6.0.2011.286.17.18-lib.patch,
+  -nmrpipe-6.0.2011.286.17.18.ebuild, +nmrpipe-6.2.2011.314.15.12.ebuild:
+  Version Bump
+
+*nmrpipe-6.2.2011.314.15.12 (06 Dec 2011)
+
+  06 Dec 2011; Justin Lecher <jlec@gentoo.org>
+  +files/6.2.2011.314.15.12-lib.patch, -files/6.0.2011.286.17.18-lib.patch,
+  -nmrpipe-6.0.2011.286.17.18.ebuild, +nmrpipe-6.2.2011.314.15.12.ebuild:
+  Version Bump
+
   11 Nov 2011; Justin Lecher <jlec@gentoo.org>
   +files/6.0.2011.286.17.18-lib.patch, -files/5.99.2011.242.16.23-lib.patch,
   -nmrpipe-5.99.2011.242.16.23.ebuild, +nmrpipe-6.0.2011.286.17.18.ebuild:

diff --git a/sci-chemistry/nmrpipe/files/6.0.2011.286.17.18-lib.patch b/sci-chemistry/nmrpipe/files/6.2.2011.314.15.12-lib.patch
similarity index 100%
rename from sci-chemistry/nmrpipe/files/6.0.2011.286.17.18-lib.patch
rename to sci-chemistry/nmrpipe/files/6.2.2011.314.15.12-lib.patch

diff --git a/sci-chemistry/nmrpipe/nmrpipe-6.0.2011.286.17.18.ebuild b/sci-chemistry/nmrpipe/nmrpipe-6.2.2011.314.15.12.ebuild
similarity index 100%
rename from sci-chemistry/nmrpipe/nmrpipe-6.0.2011.286.17.18.ebuild
rename to sci-chemistry/nmrpipe/nmrpipe-6.2.2011.314.15.12.ebuild



^ permalink raw reply related	[flat|nested] 22+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-chemistry/nmrpipe/, sci-chemistry/nmrpipe/files/
@ 2012-01-10  9:30 Justin Lecher
  0 siblings, 0 replies; 22+ messages in thread
From: Justin Lecher @ 2012-01-10  9:30 UTC (permalink / raw
  To: gentoo-commits

commit:     526804b3e863841151d43ec3ce699dfcbad149fe
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Tue Jan 10 09:29:27 2012 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Tue Jan 10 09:29:27 2012 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=526804b3

Version Bump

(Portage version: 2.2.0_alpha84/git/Linux x86_64, RepoMan options: --force, signed Manifest commit with key 70EB7916)

---
 sci-chemistry/nmrpipe/ChangeLog                    |    9 ++++++++-
 ...5.12-lib.patch => 6.5.2012.009.14.35-lib.patch} |    0
 ...12.ebuild => nmrpipe-6.5.2012.009.14.35.ebuild} |    2 +-
 3 files changed, 9 insertions(+), 2 deletions(-)

diff --git a/sci-chemistry/nmrpipe/ChangeLog b/sci-chemistry/nmrpipe/ChangeLog
index 2f35ae6..48cb092 100644
--- a/sci-chemistry/nmrpipe/ChangeLog
+++ b/sci-chemistry/nmrpipe/ChangeLog
@@ -1,7 +1,14 @@
 # ChangeLog for sci-chemistry/nmrpipe
-# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
+# Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+*nmrpipe-6.5.2012.009.14.35 (10 Jan 2012)
+
+  10 Jan 2012; Justin Lecher <jlec@gentoo.org>
+  +files/6.5.2012.009.14.35-lib.patch, -files/6.2.2011.314.15.12-lib.patch,
+  -nmrpipe-6.2.2011.314.15.12.ebuild, +nmrpipe-6.5.2012.009.14.35.ebuild:
+  Version Bump
+
   26 Dec 2011; Justin Lecher <jlec@gentoo.org>
   nmrpipe-6.2.2011.314.15.12.ebuild:
   Remove dep on xview

diff --git a/sci-chemistry/nmrpipe/files/6.2.2011.314.15.12-lib.patch b/sci-chemistry/nmrpipe/files/6.5.2012.009.14.35-lib.patch
similarity index 100%
rename from sci-chemistry/nmrpipe/files/6.2.2011.314.15.12-lib.patch
rename to sci-chemistry/nmrpipe/files/6.5.2012.009.14.35-lib.patch

diff --git a/sci-chemistry/nmrpipe/nmrpipe-6.2.2011.314.15.12.ebuild b/sci-chemistry/nmrpipe/nmrpipe-6.5.2012.009.14.35.ebuild
similarity index 99%
rename from sci-chemistry/nmrpipe/nmrpipe-6.2.2011.314.15.12.ebuild
rename to sci-chemistry/nmrpipe/nmrpipe-6.5.2012.009.14.35.ebuild
index 4814aed..0ced64d 100644
--- a/sci-chemistry/nmrpipe/nmrpipe-6.2.2011.314.15.12.ebuild
+++ b/sci-chemistry/nmrpipe/nmrpipe-6.5.2012.009.14.35.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2011 Gentoo Foundation
+# Copyright 1999-2012 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 # $Header: $
 



^ permalink raw reply related	[flat|nested] 22+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-chemistry/nmrpipe/, sci-chemistry/nmrpipe/files/
@ 2012-03-22 21:57 Justin Lecher
  0 siblings, 0 replies; 22+ messages in thread
From: Justin Lecher @ 2012-03-22 21:57 UTC (permalink / raw
  To: gentoo-commits

commit:     f24577a3113b0bbc13c127be3f3bf2e52da67162
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Thu Mar 22 21:56:40 2012 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Thu Mar 22 21:56:40 2012 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=f24577a3

Version Bump

(Portage version: 2.2.0_alpha93/git/Linux x86_64, RepoMan options: --force, unsigned Manifest commit)

---
 sci-chemistry/nmrpipe/ChangeLog                    |   12 ++++++++++++
 ...4.35-lib.patch => 7.1.2012.029.12.03-lib.patch} |    0
 ...35.ebuild => nmrpipe-7.1.2012.029.12.03.ebuild} |   10 ++++------
 3 files changed, 16 insertions(+), 6 deletions(-)

diff --git a/sci-chemistry/nmrpipe/ChangeLog b/sci-chemistry/nmrpipe/ChangeLog
index 48cb092..b406bb0 100644
--- a/sci-chemistry/nmrpipe/ChangeLog
+++ b/sci-chemistry/nmrpipe/ChangeLog
@@ -2,6 +2,18 @@
 # Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+  22 Mar 2012; Justin Lecher <jlec@gentoo.org>
+  +files/7.1.2012.029.12.03-lib.patch, -files/6.5.2012.009.14.35-lib.patch,
+  -nmrpipe-6.5.2012.009.14.35.ebuild, +nmrpipe-7.1.2012.029.12.03.ebuild:
+  Version Bump
+
+*nmrpipe-7.1.2012.029.12.03 (22 Mar 2012)
+
+  22 Mar 2012; Justin Lecher <jlec@gentoo.org>
+  +files/7.1.2012.029.12.03-lib.patch, -files/6.5.2012.009.14.35-lib.patch,
+  -nmrpipe-6.5.2012.009.14.35.ebuild, +nmrpipe-7.1.2012.029.12.03.ebuild:
+  Version Bump
+
 *nmrpipe-6.5.2012.009.14.35 (10 Jan 2012)
 
   10 Jan 2012; Justin Lecher <jlec@gentoo.org>

diff --git a/sci-chemistry/nmrpipe/files/6.5.2012.009.14.35-lib.patch b/sci-chemistry/nmrpipe/files/7.1.2012.029.12.03-lib.patch
similarity index 100%
rename from sci-chemistry/nmrpipe/files/6.5.2012.009.14.35-lib.patch
rename to sci-chemistry/nmrpipe/files/7.1.2012.029.12.03-lib.patch

diff --git a/sci-chemistry/nmrpipe/nmrpipe-6.5.2012.009.14.35.ebuild b/sci-chemistry/nmrpipe/nmrpipe-7.1.2012.029.12.03.ebuild
similarity index 96%
rename from sci-chemistry/nmrpipe/nmrpipe-6.5.2012.009.14.35.ebuild
rename to sci-chemistry/nmrpipe/nmrpipe-7.1.2012.029.12.03.ebuild
index 0ced64d..cbf35d6 100644
--- a/sci-chemistry/nmrpipe/nmrpipe-6.5.2012.009.14.35.ebuild
+++ b/sci-chemistry/nmrpipe/nmrpipe-7.1.2012.029.12.03.ebuild
@@ -12,10 +12,8 @@ DESCRIPTION="Spectral visualisation, analysis and Fourier processing"
 HOMEPAGE="http://spin.niddk.nih.gov/bax/software/NMRPipe/"
 SRC_URI="
 	NMRPipeX.tZ
-	valpha_all.tar
 	talos.tZ
 	dyn.tZ
-	acme.tar.Z
 	binval.com
 	install.com"
 
@@ -69,8 +67,8 @@ pkg_nofetch() {
 src_unpack() {
 	# The installation script will unpack the package. We just provide symlinks
 	# to the archive files, ...
-	for i in valpha_all.tar talos.tZ NMRPipeX.tZ dyn.tZ acme.tar.Z; do
-		ln -s "${DISTDIR}"/${i} ${i}
+	for i in NMRPipeX.tZ talos.tZ dyn.tZ; do
+		ln -sf "${DISTDIR}"/${i} || die
 	done
 	# ... copy the installation scripts ...
 	cp -L "${DISTDIR}"/{binval.com,install.com} .
@@ -79,7 +77,7 @@ src_unpack() {
 	# Unset DISPLAY to avoid the interactive graphical test.
 	# This just unpacks the stuff
 #	env DISPLAY="" csh ./install.com +type linux9 +dest "${S}"/NMR || die
-	VIRTUALX_COMMAND="csh ./install.com +type linux9 +dest ${S}/NMR" virtualmake
+	VIRTUALX_COMMAND="csh ./install.com +type linux9 +dest ${S}/NMR +nopost" virtualmake
 }
 
 src_prepare() {
@@ -112,7 +110,7 @@ src_install() {
 	EOF
 
 	# Remove the symlinks for the archives and the installation scripts.
-	for i in ${A} valpha_hn.tar valpha_time.tar valpha.tar; do
+	for i in ${A} ; do
 		rm -f ${i} || die "Failed to remove archive symlinks."
 	done
 	# Remove some of the bundled applications and libraries; they are provided by Gentoo instead.



^ permalink raw reply related	[flat|nested] 22+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-chemistry/nmrpipe/, sci-chemistry/nmrpipe/files/
@ 2012-05-02  6:52 Justin Lecher
  0 siblings, 0 replies; 22+ messages in thread
From: Justin Lecher @ 2012-05-02  6:52 UTC (permalink / raw
  To: gentoo-commits

commit:     8bcfcf2a9b3a8950c8c7eb41072ae2b88ff85132
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Wed May  2 06:52:01 2012 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Wed May  2 06:52:01 2012 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=8bcfcf2a

sci-chemistry/nmrpipe: Version Bump, use QA_PREBUILT

(Portage version: 2.2.0_alpha101/git/Linux x86_64, RepoMan options: --force, unsigned Manifest commit)

---
 sci-chemistry/nmrpipe/ChangeLog                    |   12 ++++++++++++
 ...2.03-lib.patch => 7.3.2012.114.11.33-lib.patch} |    0
 ...03.ebuild => nmrpipe-7.3.2012.114.11.33.ebuild} |    9 ++++++++-
 3 files changed, 20 insertions(+), 1 deletions(-)

diff --git a/sci-chemistry/nmrpipe/ChangeLog b/sci-chemistry/nmrpipe/ChangeLog
index b406bb0..5e2b18b 100644
--- a/sci-chemistry/nmrpipe/ChangeLog
+++ b/sci-chemistry/nmrpipe/ChangeLog
@@ -2,6 +2,18 @@
 # Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+  02 May 2012; Justin Lecher <jlec@gentoo.org>
+  +files/7.3.2012.114.11.33-lib.patch, -files/7.1.2012.029.12.03-lib.patch,
+  -nmrpipe-7.1.2012.029.12.03.ebuild, +nmrpipe-7.3.2012.114.11.33.ebuild:
+  Version Bump, use QA_PREBUILT
+
+*nmrpipe-7.3.2012.114.11.33 (02 May 2012)
+
+  02 May 2012; Justin Lecher <jlec@gentoo.org>
+  +files/7.3.2012.114.11.33-lib.patch, -files/7.1.2012.029.12.03-lib.patch,
+  -nmrpipe-7.1.2012.029.12.03.ebuild, +nmrpipe-7.3.2012.114.11.33.ebuild:
+  Version Bump, use QA_PREBUILT
+
   22 Mar 2012; Justin Lecher <jlec@gentoo.org>
   +files/7.1.2012.029.12.03-lib.patch, -files/6.5.2012.009.14.35-lib.patch,
   -nmrpipe-6.5.2012.009.14.35.ebuild, +nmrpipe-7.1.2012.029.12.03.ebuild:

diff --git a/sci-chemistry/nmrpipe/files/7.1.2012.029.12.03-lib.patch b/sci-chemistry/nmrpipe/files/7.3.2012.114.11.33-lib.patch
similarity index 100%
rename from sci-chemistry/nmrpipe/files/7.1.2012.029.12.03-lib.patch
rename to sci-chemistry/nmrpipe/files/7.3.2012.114.11.33-lib.patch

diff --git a/sci-chemistry/nmrpipe/nmrpipe-7.1.2012.029.12.03.ebuild b/sci-chemistry/nmrpipe/nmrpipe-7.3.2012.114.11.33.ebuild
similarity index 96%
rename from sci-chemistry/nmrpipe/nmrpipe-7.1.2012.029.12.03.ebuild
rename to sci-chemistry/nmrpipe/nmrpipe-7.3.2012.114.11.33.ebuild
index cbf35d6..16a9988 100644
--- a/sci-chemistry/nmrpipe/nmrpipe-7.1.2012.029.12.03.ebuild
+++ b/sci-chemistry/nmrpipe/nmrpipe-7.3.2012.114.11.33.ebuild
@@ -49,7 +49,14 @@ S="${WORKDIR}"
 NMRBASE="/opt/${PN}"
 ENMRBASE="${EPREFIX}/${NMRBASE}"
 
-QA_DT_HASH_amd64="opt/nmrpipe/nmrbin.linux9/lib/.*"
+QA_PREBUILT="
+	opt/nmrpipe/nmrbin.linux9/lib/.*
+	opt/nmrpipe/nmrbin.linux9/.*
+	opt/nmrpipe/talos/bin/.*
+	opt/nmrpipe/talosplus/bin/.*
+	opt/nmrpipe/promega/.*
+	opt/nmrpipe/spartaplus/.*
+	"
 
 pkg_nofetch() {
 	einfo "Please visit:"



^ permalink raw reply related	[flat|nested] 22+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-chemistry/nmrpipe/, sci-chemistry/nmrpipe/files/
@ 2012-05-02 19:22 Justin Lecher
  0 siblings, 0 replies; 22+ messages in thread
From: Justin Lecher @ 2012-05-02 19:22 UTC (permalink / raw
  To: gentoo-commits

commit:     e57fddf9d0fdf0d75589d230cf8bbffcb95d8d9d
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Mon Apr 30 07:55:46 2012 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Mon Apr 30 07:55:46 2012 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=e57fddf9

sci-chemistry/nmrpipe: Version Bump, handle all binary files correctly for QA checks

(Portage version: 2.2.0_alpha101/git/Linux x86_64, RepoMan options: --force, unsigned Manifest commit)

---
 sci-chemistry/nmrpipe/ChangeLog                    |    7 +++++++
 ...2.03-lib.patch => 7.3.2012.114.11.33-lib.patch} |    0
 ...03.ebuild => nmrpipe-7.3.2012.114.11.33.ebuild} |    9 ++++++++-
 3 files changed, 15 insertions(+), 1 deletions(-)

diff --git a/sci-chemistry/nmrpipe/ChangeLog b/sci-chemistry/nmrpipe/ChangeLog
index b406bb0..ec8b7b7 100644
--- a/sci-chemistry/nmrpipe/ChangeLog
+++ b/sci-chemistry/nmrpipe/ChangeLog
@@ -2,6 +2,13 @@
 # Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+*nmrpipe-7.3.2012.114.11.33 (30 Apr 2012)
+
+  30 Apr 2012; Justin Lecher <jlec@gentoo.org>
+  +files/7.3.2012.114.11.33-lib.patch, -files/7.1.2012.029.12.03-lib.patch,
+  -nmrpipe-7.1.2012.029.12.03.ebuild, +nmrpipe-7.3.2012.114.11.33.ebuild:
+  Version Bump, handle all binary files correctly for QA checks
+
   22 Mar 2012; Justin Lecher <jlec@gentoo.org>
   +files/7.1.2012.029.12.03-lib.patch, -files/6.5.2012.009.14.35-lib.patch,
   -nmrpipe-6.5.2012.009.14.35.ebuild, +nmrpipe-7.1.2012.029.12.03.ebuild:

diff --git a/sci-chemistry/nmrpipe/files/7.1.2012.029.12.03-lib.patch b/sci-chemistry/nmrpipe/files/7.3.2012.114.11.33-lib.patch
similarity index 100%
rename from sci-chemistry/nmrpipe/files/7.1.2012.029.12.03-lib.patch
rename to sci-chemistry/nmrpipe/files/7.3.2012.114.11.33-lib.patch

diff --git a/sci-chemistry/nmrpipe/nmrpipe-7.1.2012.029.12.03.ebuild b/sci-chemistry/nmrpipe/nmrpipe-7.3.2012.114.11.33.ebuild
similarity index 96%
rename from sci-chemistry/nmrpipe/nmrpipe-7.1.2012.029.12.03.ebuild
rename to sci-chemistry/nmrpipe/nmrpipe-7.3.2012.114.11.33.ebuild
index cbf35d6..1c65fc5 100644
--- a/sci-chemistry/nmrpipe/nmrpipe-7.1.2012.029.12.03.ebuild
+++ b/sci-chemistry/nmrpipe/nmrpipe-7.3.2012.114.11.33.ebuild
@@ -49,7 +49,14 @@ S="${WORKDIR}"
 NMRBASE="/opt/${PN}"
 ENMRBASE="${EPREFIX}/${NMRBASE}"
 
-QA_DT_HASH_amd64="opt/nmrpipe/nmrbin.linux9/lib/.*"
+QA_FLAGS_IGNORED_amd64="
+	opt/nmrpipe/nmrbin.linux9/lib/.*
+	opt/nmrpipe/nmrbin.linux9/.*
+	opt/nmrpipe/promega/bin.*
+	opt/nmrpipe/talos/bin/.*
+	opt/nmrpipe/talosplus/bin/.*
+	opt/nmrpipe/spartaplus/bin/.*
+	"
 
 pkg_nofetch() {
 	einfo "Please visit:"



^ permalink raw reply related	[flat|nested] 22+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-chemistry/nmrpipe/, sci-chemistry/nmrpipe/files/
@ 2012-07-31 10:11 Justin Lecher
  0 siblings, 0 replies; 22+ messages in thread
From: Justin Lecher @ 2012-07-31 10:11 UTC (permalink / raw
  To: gentoo-commits

commit:     6f1eb5a6096997c71b82296f509d564c2e42c48f
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Tue Jul 31 10:08:56 2012 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Tue Jul 31 10:08:56 2012 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=6f1eb5a6

sci-chemistry/nmrpipe: Version Bump, bring x11-libs/xview back into the game

(Portage version: 2.2.0_alpha120/git/Linux x86_64, RepoMan options: --force, unsigned Manifest commit)

---
 sci-chemistry/nmrpipe/ChangeLog                    |   16 ++++++++++++++++
 ...1.33-lib.patch => 7.5.2012.204.11.07-lib.patch} |    0
 ...33.ebuild => nmrpipe-7.5.2012.204.11.07.ebuild} |    7 ++++---
 3 files changed, 20 insertions(+), 3 deletions(-)

diff --git a/sci-chemistry/nmrpipe/ChangeLog b/sci-chemistry/nmrpipe/ChangeLog
index 5e2b18b..87651f3 100644
--- a/sci-chemistry/nmrpipe/ChangeLog
+++ b/sci-chemistry/nmrpipe/ChangeLog
@@ -2,6 +2,22 @@
 # Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+  31 Jul 2012; Justin Lecher <jlec@gentoo.org>
+  +files/7.5.2012.204.11.07-lib.patch, -files/7.3.2012.114.11.33-lib.patch,
+  -nmrpipe-7.3.2012.114.11.33.ebuild, +nmrpipe-7.5.2012.204.11.07.ebuild:
+  Version Bump, bring x11-libs/xview back into the game
+
+  31 Jul 2012; Justin Lecher <jlec@gentoo.org>
+  +files/7.5.2012.204.11.07-lib.patch, -files/7.3.2012.114.11.33-lib.patch,
+  -nmrpipe-7.3.2012.114.11.33.ebuild, +nmrpipe-7.5.2012.204.11.07.ebuild:
+  Version Bump, bring x11-libs/xview back into the game
+
+*nmrpipe-7.5.2012.204.11.07 (31 Jul 2012)
+
+  31 Jul 2012; Justin Lecher <jlec@gentoo.org>
+  -nmrpipe-7.3.2012.114.11.33.ebuild, +nmrpipe-7.5.2012.204.11.07.ebuild:
+  Version Bump, bring x11-libs/xview back into the game
+
   02 May 2012; Justin Lecher <jlec@gentoo.org>
   +files/7.3.2012.114.11.33-lib.patch, -files/7.1.2012.029.12.03-lib.patch,
   -nmrpipe-7.1.2012.029.12.03.ebuild, +nmrpipe-7.3.2012.114.11.33.ebuild:

diff --git a/sci-chemistry/nmrpipe/files/7.3.2012.114.11.33-lib.patch b/sci-chemistry/nmrpipe/files/7.5.2012.204.11.07-lib.patch
similarity index 100%
rename from sci-chemistry/nmrpipe/files/7.3.2012.114.11.33-lib.patch
rename to sci-chemistry/nmrpipe/files/7.5.2012.204.11.07-lib.patch

diff --git a/sci-chemistry/nmrpipe/nmrpipe-7.3.2012.114.11.33.ebuild b/sci-chemistry/nmrpipe/nmrpipe-7.5.2012.204.11.07.ebuild
similarity index 98%
rename from sci-chemistry/nmrpipe/nmrpipe-7.3.2012.114.11.33.ebuild
rename to sci-chemistry/nmrpipe/nmrpipe-7.5.2012.204.11.07.ebuild
index 16a9988..7d84f8a 100644
--- a/sci-chemistry/nmrpipe/nmrpipe-7.3.2012.114.11.33.ebuild
+++ b/sci-chemistry/nmrpipe/nmrpipe-7.5.2012.204.11.07.ebuild
@@ -4,7 +4,7 @@
 
 # Versioning is output of nmrPipe -help
 
-EAPI=3
+EAPI=4
 
 inherit eutils prefix virtualx
 
@@ -39,13 +39,14 @@ RDEPEND="${DEPEND}
 	sys-libs/ncurses
 	x11-apps/xset
 	x11-libs/libX11
+	x11-libs/xview
 	amd64? (
 		app-emulation/emul-linux-x86-baselibs
 		app-emulation/emul-linux-x86-xlibs
 	)"
-#	x86? ( x11-libs/xview )"
 
 S="${WORKDIR}"
+
 NMRBASE="/opt/${PN}"
 ENMRBASE="${EPREFIX}/${NMRBASE}"
 
@@ -126,7 +127,7 @@ src_install() {
 		nmrbin.{linux,mac,sgi6x,sol,winxp} nmruser format \
 		|| die "Failed to remove unnecessary libraries."
 	# As long as xview is not fixed for amd64 we do this
-	#use amd64 || rm nmrbin.linux9/lib/{libxview.so*,libolgx.so*}
+	rm nmrbin.linux9/lib/{libxview.so*,libolgx.so*} || die
 	# Remove the initialisation script generated during the installation.
 	# It contains incorrect hardcoded paths; only the "nmrInit.com" script
 	# should be used.


^ permalink raw reply related	[flat|nested] 22+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-chemistry/nmrpipe/, sci-chemistry/nmrpipe/files/
@ 2012-10-28 21:54 Justin Lecher
  0 siblings, 0 replies; 22+ messages in thread
From: Justin Lecher @ 2012-10-28 21:54 UTC (permalink / raw
  To: gentoo-commits

commit:     ad33ee943a18422e85848722009c55597e086026
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Sun Oct 28 21:54:06 2012 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Sun Oct 28 21:54:06 2012 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=ad33ee94

sci-chemistry/nmrpipe: Version Bump

Package-Manager: portage-2.2.0_alpha142
RepoMan-Options: --force

---
 sci-chemistry/nmrpipe/ChangeLog                    |    8 ++++++++
 ....patch => nmrpipe-7.8.2012.295.14.58-lib.patch} |    0
 ...07.ebuild => nmrpipe-7.8.2012.295.14.58.ebuild} |    2 +-
 3 files changed, 9 insertions(+), 1 deletions(-)

diff --git a/sci-chemistry/nmrpipe/ChangeLog b/sci-chemistry/nmrpipe/ChangeLog
index 4b7db11..6aa5e4c 100644
--- a/sci-chemistry/nmrpipe/ChangeLog
+++ b/sci-chemistry/nmrpipe/ChangeLog
@@ -2,6 +2,14 @@
 # Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+*nmrpipe-7.8.2012.295.14.58 (28 Oct 2012)
+
+  28 Oct 2012; Justin Lecher <jlec@gentoo.org>
+  -files/7.5.2012.204.11.07-lib.patch, -nmrpipe-7.5.2012.204.11.07.ebuild,
+  +nmrpipe-7.8.2012.295.14.58.ebuild,
+  +files/nmrpipe-7.8.2012.295.14.58-lib.patch:
+  Version Bump
+
   10 Aug 2012; Justin Lecher <jlec@gentoo.org>
   nmrpipe-7.5.2012.204.11.07.ebuild:
   no function called from prefix.eclass; please drop

diff --git a/sci-chemistry/nmrpipe/files/7.5.2012.204.11.07-lib.patch b/sci-chemistry/nmrpipe/files/nmrpipe-7.8.2012.295.14.58-lib.patch
similarity index 100%
rename from sci-chemistry/nmrpipe/files/7.5.2012.204.11.07-lib.patch
rename to sci-chemistry/nmrpipe/files/nmrpipe-7.8.2012.295.14.58-lib.patch

diff --git a/sci-chemistry/nmrpipe/nmrpipe-7.5.2012.204.11.07.ebuild b/sci-chemistry/nmrpipe/nmrpipe-7.8.2012.295.14.58.ebuild
similarity index 99%
rename from sci-chemistry/nmrpipe/nmrpipe-7.5.2012.204.11.07.ebuild
rename to sci-chemistry/nmrpipe/nmrpipe-7.8.2012.295.14.58.ebuild
index 00654c1..dbc9394 100644
--- a/sci-chemistry/nmrpipe/nmrpipe-7.5.2012.204.11.07.ebuild
+++ b/sci-chemistry/nmrpipe/nmrpipe-7.8.2012.295.14.58.ebuild
@@ -91,7 +91,7 @@ src_unpack() {
 
 src_prepare() {
 	local bin
-	epatch "${FILESDIR}"/${PV}-lib.patch
+	epatch "${FILESDIR}"/${P}-lib.patch
 
 	mv nmrbin.linux9/nmr{W,w}ish || die
 


^ permalink raw reply related	[flat|nested] 22+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-chemistry/nmrpipe/, sci-chemistry/nmrpipe/files/
@ 2013-01-23  9:13 Justin Lecher
  0 siblings, 0 replies; 22+ messages in thread
From: Justin Lecher @ 2013-01-23  9:13 UTC (permalink / raw
  To: gentoo-commits

commit:     d3390ef705d24c7d77c4ba018cc4c5ef19ae1cec
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Wed Jan 23 09:13:11 2013 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Wed Jan 23 09:13:11 2013 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=d3390ef7

sci-chemistry/nmrpipe: Version BUmp; drop fetch restriction as upstream provides and promotes direct access

Package-Manager: portage-2.2.0_alpha159
RepoMan-Options: --force

---
 sci-chemistry/nmrpipe/ChangeLog                    |   10 ++++++++++
 ....patch => nmrpipe-7.9.2013.021.23.09-lib.patch} |    0
 ...r2.ebuild => nmrpipe-7.9.2013.021.23.09.ebuild} |   20 ++++++++++++++------
 3 files changed, 24 insertions(+), 6 deletions(-)

diff --git a/sci-chemistry/nmrpipe/ChangeLog b/sci-chemistry/nmrpipe/ChangeLog
index 99905b0..1bf543d 100644
--- a/sci-chemistry/nmrpipe/ChangeLog
+++ b/sci-chemistry/nmrpipe/ChangeLog
@@ -2,6 +2,16 @@
 # Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+*nmrpipe-7.9.2013.021.23.09 (23 Jan 2013)
+
+  23 Jan 2013; Justin Lecher <jlec@gentoo.org>
+  -nmrpipe-7.8.2012.295.14.58-r2.ebuild,
+  -files/nmrpipe-7.8.2012.295.14.58-lib.patch,
+  +nmrpipe-7.9.2013.021.23.09.ebuild,
+  +files/nmrpipe-7.9.2013.021.23.09-lib.patch:
+  Version BUmp; drop fetch restriction as upstream provides and promotes direct
+  access
+
 *nmrpipe-7.8.2012.295.14.58-r2 (14 Jan 2013)
 
   14 Jan 2013; Justin Lecher <jlec@gentoo.org>

diff --git a/sci-chemistry/nmrpipe/files/nmrpipe-7.8.2012.295.14.58-lib.patch b/sci-chemistry/nmrpipe/files/nmrpipe-7.9.2013.021.23.09-lib.patch
similarity index 100%
rename from sci-chemistry/nmrpipe/files/nmrpipe-7.8.2012.295.14.58-lib.patch
rename to sci-chemistry/nmrpipe/files/nmrpipe-7.9.2013.021.23.09-lib.patch

diff --git a/sci-chemistry/nmrpipe/nmrpipe-7.8.2012.295.14.58-r2.ebuild b/sci-chemistry/nmrpipe/nmrpipe-7.9.2013.021.23.09.ebuild
similarity index 93%
rename from sci-chemistry/nmrpipe/nmrpipe-7.8.2012.295.14.58-r2.ebuild
rename to sci-chemistry/nmrpipe/nmrpipe-7.9.2013.021.23.09.ebuild
index 2c1767d..4870845 100644
--- a/sci-chemistry/nmrpipe/nmrpipe-7.8.2012.295.14.58-r2.ebuild
+++ b/sci-chemistry/nmrpipe/nmrpipe-7.9.2013.021.23.09.ebuild
@@ -10,12 +10,19 @@ inherit eutils virtualx
 
 DESCRIPTION="Spectral visualisation, analysis and Fourier processing"
 HOMEPAGE="http://spin.niddk.nih.gov/bax/software/NMRPipe/"
+#SRC_URI="
+#	NMRPipeX.tZ
+#	talos.tZ
+#	dyn.tZ
+#	binval.com
+#	install.com"
 SRC_URI="
-	NMRPipeX.tZ
-	talos.tZ
-	dyn.tZ
-	binval.com
-	install.com"
+	http://spin.niddk.nih.gov/NMRPipe/install/download/install.com
+	http://spin.niddk.nih.gov/NMRPipe/install/download/binval.com
+	http://spin.niddk.nih.gov/NMRPipe/install/download/NMRPipeX.tZ
+	http://spin.niddk.nih.gov/NMRPipe/install/download/talos.tZ
+	http://spin.niddk.nih.gov/NMRPipe/install/download/dyn.tZ
+	"
 
 SLOT="0"
 LICENSE="as-is"
@@ -26,7 +33,8 @@ LICENSE="as-is"
 KEYWORDS="-* ~amd64 ~x86 ~amd64-linux ~x86-linux"
 IUSE=""
 
-RESTRICT="fetch strip"
+#RESTRICT="fetch strip"
+RESTRICT="strip"
 
 DEPEND="app-shells/tcsh"
 RDEPEND="${DEPEND}


^ permalink raw reply related	[flat|nested] 22+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-chemistry/nmrpipe/, sci-chemistry/nmrpipe/files/
@ 2013-08-12 21:27 Sebastien Fabbro
  0 siblings, 0 replies; 22+ messages in thread
From: Sebastien Fabbro @ 2013-08-12 21:27 UTC (permalink / raw
  To: gentoo-commits

commit:     874b69a8c390cd8d3eb8233910ea1613c63d012b
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Mon Aug 12 09:34:42 2013 +0000
Commit:     Sebastien Fabbro <bicatali <AT> gentoo <DOT> org>
CommitDate: Mon Aug 12 09:34:55 2013 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=874b69a8

sci-chemistry/nmrpipe: Version Bump

Package-Manager: portage-2.2.0_alpha195
RepoMan-Options: --force

---
 sci-chemistry/nmrpipe/ChangeLog                                     | 6 ++++++
 ...013.021.23.09-lib.patch => nmrpipe-8.1.2013.218.23.09-lib.patch} | 0
 ...9.2013.021.23.09-r3.ebuild => nmrpipe-8.1.2013.218.23.09.ebuild} | 2 +-
 3 files changed, 7 insertions(+), 1 deletion(-)

diff --git a/sci-chemistry/nmrpipe/ChangeLog b/sci-chemistry/nmrpipe/ChangeLog
index 40c0d71..5ad1bee 100644
--- a/sci-chemistry/nmrpipe/ChangeLog
+++ b/sci-chemistry/nmrpipe/ChangeLog
@@ -2,6 +2,12 @@
 # Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+  12 Aug 2013; Justin Lecher <jlec@gentoo.org>
+  -nmrpipe-7.9.2013.021.23.09-r3.ebuild, +nmrpipe-8.1.2013.218.23.09.ebuild,
+  -files/nmrpipe-7.9.2013.021.23.09-lib.patch,
+  +files/nmrpipe-8.1.2013.218.23.09-lib.patch:
+  Version Bump
+
   11 Jul 2013; Justin Lecher <jlec@gentoo.org>
   -nmrpipe-7.9.2013.021.23.09-r2.ebuild, +nmrpipe-7.9.2013.021.23.09-r3.ebuild:
   Fix for prefix

diff --git a/sci-chemistry/nmrpipe/files/nmrpipe-7.9.2013.021.23.09-lib.patch b/sci-chemistry/nmrpipe/files/nmrpipe-8.1.2013.218.23.09-lib.patch
similarity index 100%
rename from sci-chemistry/nmrpipe/files/nmrpipe-7.9.2013.021.23.09-lib.patch
rename to sci-chemistry/nmrpipe/files/nmrpipe-8.1.2013.218.23.09-lib.patch

diff --git a/sci-chemistry/nmrpipe/nmrpipe-7.9.2013.021.23.09-r3.ebuild b/sci-chemistry/nmrpipe/nmrpipe-8.1.2013.218.23.09.ebuild
similarity index 99%
rename from sci-chemistry/nmrpipe/nmrpipe-7.9.2013.021.23.09-r3.ebuild
rename to sci-chemistry/nmrpipe/nmrpipe-8.1.2013.218.23.09.ebuild
index 51c4530..1a81a38 100644
--- a/sci-chemistry/nmrpipe/nmrpipe-7.9.2013.021.23.09-r3.ebuild
+++ b/sci-chemistry/nmrpipe/nmrpipe-8.1.2013.218.23.09.ebuild
@@ -25,7 +25,7 @@ SRC_URI="
 	"
 
 SLOT="0"
-LICENSE="all-rights-reserved"
+LICENSE="nmrpipe"
 # Right now, precompiled executables are only available for Linux on the
 # x86 architecture. The maintainer chose to keep the sources closed, but
 # says he will gladly provide precompiled executables for other platforms


^ permalink raw reply related	[flat|nested] 22+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-chemistry/nmrpipe/, sci-chemistry/nmrpipe/files/
@ 2013-10-28  9:01 Justin Lecher
  0 siblings, 0 replies; 22+ messages in thread
From: Justin Lecher @ 2013-10-28  9:01 UTC (permalink / raw
  To: gentoo-commits

commit:     1807b7a45263b799afb132afba7de7187984a3e3
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Mon Oct 28 09:01:06 2013 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Mon Oct 28 09:01:23 2013 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=1807b7a4

sci-chemistry/nmrpipe: Add IBS extract.M macro

Package-Manager: portage-2.2.7
RepoMan-Options: --force

---
 sci-chemistry/nmrpipe/ChangeLog                    | 10 ++++++
 sci-chemistry/nmrpipe/files/extract.M              | 37 ++++++++++++++++++++++
 ...ebuild => nmrpipe-8.1.2013.218.23.09-r1.ebuild} |  3 ++
 3 files changed, 50 insertions(+)

diff --git a/sci-chemistry/nmrpipe/ChangeLog b/sci-chemistry/nmrpipe/ChangeLog
index 5ad1bee..0e66662 100644
--- a/sci-chemistry/nmrpipe/ChangeLog
+++ b/sci-chemistry/nmrpipe/ChangeLog
@@ -2,6 +2,16 @@
 # Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+  28 Oct 2013; Justin Lecher <jlec@gentoo.org>
+  -nmrpipe-8.1.2013.218.23.09.ebuild, +nmrpipe-8.1.2013.218.23.09-r1.ebuild,
+  +files/extract.M:
+  Add IBS extract.M macro
+
+  25 Oct 2013; Justin Lecher <jlec@gentoo.org>
+  -nmrpipe-8.1.2013.218.23.09.ebuild, +nmrpipe-8.1.2013.218.23.09-r1.ebuild,
+  +files/extract.M:
+  Add IBS extract.M macro
+
   12 Aug 2013; Justin Lecher <jlec@gentoo.org>
   -nmrpipe-7.9.2013.021.23.09-r3.ebuild, +nmrpipe-8.1.2013.218.23.09.ebuild,
   -files/nmrpipe-7.9.2013.021.23.09-lib.patch,

diff --git a/sci-chemistry/nmrpipe/files/extract.M b/sci-chemistry/nmrpipe/files/extract.M
new file mode 100644
index 0000000..544d2fe
--- /dev/null
+++ b/sci-chemistry/nmrpipe/files/extract.M
@@ -0,0 +1,37 @@
+if (sliceCode == CODE_ARGS)
+   {
+    ArrayNum = argVal( "an" );   /* Array size of arrayed parameter */
+    SpecNum = argVal( "sn" );    /* Spectrum number to be extracted */
+    printf(" Spectrum %3.0f out of %4.0f\n",SpecNum,ArrayNum);
+   };
+
+if (sliceCode == CODE_INIT)
+   {
+    (void) setParm( fdata, NDSIZE, integer( specnum/ArrayNum ), CUR_YDIM );
+   };
+
+if (sliceCode >1)
+   {
+    exit( 0 );
+   };
+
+if (sliceCode < 0)
+   {
+    exit( 0 );
+   };
+
+
+float fid[2*size*specnum];
+float Single[4*size];
+
+(void) dReadB(inUnit,fid, 2*wordLen*size*specnum );     /* load the whole FID data in the array "fid" */
+
+offset = 4*size*(SpecNum-1);
+
+for( i = 0; i < specnum*size*2; i = i+4*ArrayNum*size)
+{
+ (void) vvCopyOff( Single, fid, 4*size, 0, offset );    /* load in the buffer array "Single" two complex spectra
+                                                           (phase=1,phase=2) from the "fid" array starting from offset*/
+ (void) dWrite( outUnit,Single,wordLen*4*size);         /* write "Single in the output */
+ offset += 4*ArrayNum*size;
+}

diff --git a/sci-chemistry/nmrpipe/nmrpipe-8.1.2013.218.23.09.ebuild b/sci-chemistry/nmrpipe/nmrpipe-8.1.2013.218.23.09-r1.ebuild
similarity index 99%
rename from sci-chemistry/nmrpipe/nmrpipe-8.1.2013.218.23.09.ebuild
rename to sci-chemistry/nmrpipe/nmrpipe-8.1.2013.218.23.09-r1.ebuild
index 1a81a38..cd253d5 100644
--- a/sci-chemistry/nmrpipe/nmrpipe-8.1.2013.218.23.09.ebuild
+++ b/sci-chemistry/nmrpipe/nmrpipe-8.1.2013.218.23.09-r1.ebuild
@@ -208,4 +208,7 @@ src_install() {
 
 	exeinto ${NMRBASE}/nmrbin.linux9
 	doexe "${T}"/nmrWish
+
+	insinto ${NMRBASE}/nmrtxt
+	doins "${FILESDIR}"/extract.M
 }


^ permalink raw reply related	[flat|nested] 22+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-chemistry/nmrpipe/, sci-chemistry/nmrpipe/files/
@ 2015-11-26 11:57 Justin Lecher
  0 siblings, 0 replies; 22+ messages in thread
From: Justin Lecher @ 2015-11-26 11:57 UTC (permalink / raw
  To: gentoo-commits

commit:     4c364af359ca5494e932dd10c0ee694df64ee049
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Thu Nov 26 11:57:22 2015 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Thu Nov 26 11:57:22 2015 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=4c364af3

sci-chemistry/nmrpipe: Version Bump and cleanup

Package-Manager: portage-2.2.25
Signed-off-by: Justin Lecher <jlec <AT> gentoo.org>

 .../nmrpipe/files/{env-nmrpipe-new => env-nmrpipe} |  8 ++-
 ....patch => nmrpipe-8.7.2015.320.15.26-lib.patch} |  0
 ...r1.ebuild => nmrpipe-8.7.2015.320.15.26.ebuild} | 74 +++++++++-------------
 3 files changed, 36 insertions(+), 46 deletions(-)

diff --git a/sci-chemistry/nmrpipe/files/env-nmrpipe-new b/sci-chemistry/nmrpipe/files/env-nmrpipe
similarity index 81%
rename from sci-chemistry/nmrpipe/files/env-nmrpipe-new
rename to sci-chemistry/nmrpipe/files/env-nmrpipe
index 87697f7..e155adc 100644
--- a/sci-chemistry/nmrpipe/files/env-nmrpipe-new
+++ b/sci-chemistry/nmrpipe/files/env-nmrpipe
@@ -1,8 +1,8 @@
 # Platform
 NMRCHECK="ALL"
 
-BINTYPE="linux9"
-NMRBINTYPE="linux9"
+BINTYPE="@BINTYPE@"
+NMRBINTYPE="@BINTYPE@"
 PATH="/opt/nmrpipe/com:/opt/nmrpipe/bin:/opt/nmrpipe/dynamo/tcl:/opt/nmrpipe/talosplus/com:/opt/nmrpipe/dynamo/com"
 
 # NMRPipe
@@ -40,3 +40,7 @@ PDBH_TAB="/opt/nmrpipe/pdb/resolution.tab"
 TCLPATH="/opt/nmrpipe/com"
 
 PROMEGA_DIR="/opt/nmrpipe/promega"
+
+NMR_PLUGIN_FN="/opt/nmrpipe/smile/NMR_PLUGIN_FN"
+NMR_PLUGIN_EXE="/opt/nmrpipe/smile/NMR_PLUGIN_EXE"
+NMR_PLUGIN_INFO="/opt/nmrpipe/smile/NMR_PLUGIN_INFO"

diff --git a/sci-chemistry/nmrpipe/files/nmrpipe-8.6.2015.271.07.19-lib.patch b/sci-chemistry/nmrpipe/files/nmrpipe-8.7.2015.320.15.26-lib.patch
similarity index 100%
rename from sci-chemistry/nmrpipe/files/nmrpipe-8.6.2015.271.07.19-lib.patch
rename to sci-chemistry/nmrpipe/files/nmrpipe-8.7.2015.320.15.26-lib.patch

diff --git a/sci-chemistry/nmrpipe/nmrpipe-8.6.2015.271.07.19-r1.ebuild b/sci-chemistry/nmrpipe/nmrpipe-8.7.2015.320.15.26.ebuild
similarity index 74%
rename from sci-chemistry/nmrpipe/nmrpipe-8.6.2015.271.07.19-r1.ebuild
rename to sci-chemistry/nmrpipe/nmrpipe-8.7.2015.320.15.26.ebuild
index 725c01d..2e80308 100644
--- a/sci-chemistry/nmrpipe/nmrpipe-8.6.2015.271.07.19-r1.ebuild
+++ b/sci-chemistry/nmrpipe/nmrpipe-8.7.2015.320.15.26.ebuild
@@ -20,6 +20,7 @@ SRC_URI="
 	http://spin.niddk.nih.gov/NMRPipe/install/download/install.com -> install-${PV}.com
 	http://spin.niddk.nih.gov/NMRPipe/install/download/binval.com -> binval-${PV}.com
 	http://spin.niddk.nih.gov/NMRPipe/install/download/NMRPipeX.tZ -> NMRPipeX-${PV}.tZ
+	http://spin.niddk.nih.gov/NMRPipe/install/download/plugin.smile.tZ -> plugin.smile-${PV}.tZ
 	http://spin.niddk.nih.gov/NMRPipe/install/download/talos.tZ -> talos-${PV}.tZ
 	http://spin.niddk.nih.gov/NMRPipe/install/download/dyn.tZ -> dyn-${PV}.tZ
 	"
@@ -33,7 +34,6 @@ LICENSE="nmrpipe"
 KEYWORDS=""
 IUSE=""
 
-#RESTRICT="fetch strip"
 RESTRICT="strip"
 
 DEPEND="app-shells/tcsh"
@@ -53,76 +53,61 @@ RDEPEND="${DEPEND}
 	!prefix? ( >=x11-libs/libX11-1.6.2[abi_x86_32(-)] )
 	prefix? ( dev-util/patchelf )"
 
-S="${WORKDIR}"
+S="${WORKDIR}/NMR"
 
 NMRBASE="/opt/${PN}"
 ENMRBASE="${EPREFIX}/${NMRBASE}"
 
-QA_PREBUILT="
-	opt/.*
-	"
-
-pkg_nofetch() {
-	einfo "Please visit:"
-	einfo "\t${HOMEPAGE}"
-	einfo
-	einfo "Contact the author, then download the following files:"
-	for i in ${A}; do
-		einfo "\t${i}"
-	done
-	einfo
-	einfo "Place the downloaded files in your distfiles directory:"
-	einfo "\t${DISTDIR}"
-}
+QA_PREBUILT="opt/.*"
 
 src_unpack() {
 	# The installation script will unpack the package. We just provide symlinks
 	# to the archive files, ...
-	for i in NMRPipeX-${PV}.tZ talos-${PV}.tZ dyn-${PV}.tZ; do
+	for i in NMRPipeX-${PV}.tZ plugin.smile-${PV}.tZ talos-${PV}.tZ dyn-${PV}.tZ; do
 		ln -sf "${DISTDIR}"/${i} ${i/-${PV}/} || die
 	done
+	mkdir "${S}" && cd "${S}" || die
 	# ... copy the installation scripts ...
 	cp -L "${DISTDIR}"/install-${PV}.com install.com || die
 	cp -L "${DISTDIR}"/binval-${PV}.com binval.com || die
 	# ... and make the installation scripts executable.
 	chmod +x *.com || die
-	# Unset DISPLAY to avoid the interactive graphical test.
-	# This just unpacks the stuff
-#	env DISPLAY="" csh ./install.com +type linux9 +dest "${S}"/NMR || die
-	VIRTUALX_COMMAND="csh ./install.com +type linux9 +dest ${S}/NMR +nopost" virtualmake
+	VIRTUALX_COMMAND="csh"
+	virtualmake \
+		./install.com \
+		+type $(usex x86 linux9 linux212_64) \
+		+src "${WORKDIR}" \
+		+dest "${S}" \
+		+nopost +nocshrc
 }
 
 src_prepare() {
-	local bin
+	local bin i
 	epatch "${FILESDIR}"/${P}-lib.patch
 
-	mv nmrbin.linux9/nmr{W,w}ish || die
+	mv nmrbin.$(usex x86 linux9 linux212_64)/nmr{W,w}ish || die
 
 	ebegin "Cleaning installation"
-	for i in ${A} ; do
-		rm -f ${i/-${PV}/} || die "Failed to remove archive symlinks."
-	done
 
 	# Remove some of the bundled applications and libraries; they are provided by Gentoo instead.
-#	rm -r nmrbin.linux9/{lib/{libBLT24.so,libolgx.so*,libxview.so*,*.timestamp},*timestamp,xv,gnuplot*,rasmol*,nc,nedit} \
-	rm -rf nmrbin.linux9/{lib/*.timestamp,*timestamp,xv,gnuplot*,rasmol*,nc,nedit} \
-		nmrbin.{linux,mac,sgi6x,sol,winxp} nmruser format \
+	rm -rf nmrbin.linux*/{lib/*.timestamp,*timestamp,xv,gnuplot*,rasmol*,nc,nedit} \
+		nmrbin.{linux,mac} nmruser format \
+		$(usex x86 nmrbin.linux212_64 nmrbin.linux9) \
 		|| die "Failed to remove unnecessary libraries."
 	# As long as xview is not fixed for amd64 we do this
-	rm nmrbin.linux9/lib/{libxview.so*,libolgx.so*} || die
+	rm nmrbin.linux*/lib/{libxview.so*,libolgx.so*} || die
 	# Remove the initialisation script generated during the installation.
 	# It contains incorrect hardcoded paths; only the "nmrInit.com" script
 	# should be used.
-	rm -f com/nmrInit.linux9.com || die "Failed to remove broken init script."
+	rm -f com/nmrInit.linux*.com || die "Failed to remove broken init script."
 	# Remove installation log files.
-	rm -f README_NMRPIPE_USERS *.log || die "Failed to remove installation log."
+	rm -f README_NMRPIPE_USERS *.log install.com binval.com || die "Failed to remove installation log."
 	# Remove unused binaries
 	rm -f {talos*,spartaplus,promega}/bin/*{linux,mac,sgi6x,winxp} pdb/misc/addSeg || die
 
 	# Some scripts are on the wrong place
 	cp -f nmrtxt/*.com com/
-	rm -f {acme,com}/{nmrproc,fid}.com || die
-
+	rm -f {acme,com}/{nmrproc,fid,install}.com || die
 	eend
 
 	ebegin "Fixing paths in scripts"
@@ -143,7 +128,7 @@ src_prepare() {
 		-e "s: /usr/local/bin: ${EPREFIX}/usr/bin:g" \
 		-i $(find "${S}" \( -name "*.tcl" -o -name "*.com" -o -name "*.ksh" \)) \
 			{com/,nmrtxt/*.com,nmrtxt/nt/*.com,dynamo/tcl/,talos*/com/,dynamo/tcl/}* \
-			nmrbin.linux9/{nmrDraw,xNotify} || die
+			nmrbin.linux*/{nmrDraw,xNotify} || die
 	eend
 
 	if use prefix; then
@@ -155,7 +140,7 @@ src_prepare() {
 			-i com/* || die
 
 		ebegin "Setting RPATH in binaries"
-		for bin in $(find nmrbin.linux9/ -type f -maxdepth 1); do
+		for bin in $(find nmrbin.linux*/ -type f -maxdepth 1); do
 			patchelf --set-rpath "${EPREFIX}/usr/lib/" ${bin}
 		done
 		eend $?
@@ -187,20 +172,21 @@ src_install() {
 
 	sed \
 		-e "s:/opt/nmrpipe:${EPREFIX}/opt/nmrpipe:g" \
-		"${FILESDIR}"/env-${PN}-new \
-		> env-${PN}-new || die
-	newenvd env-${PN}-new 40${PN}
+		-e "s:@BINTYPE@:$(usex x86 linux9 linux212_64):g" \
+		"${FILESDIR}"/env-${PN} \
+		> "${T}"/env-${PN} || die
+	newenvd "${T}"/env-${PN} 40${PN}
 
 	insinto ${NMRBASE}
 	doins -r *
 
-	dosym nmrbin.linux9 ${NMRBASE}/bin
+	dosym nmrbin.linux* ${NMRBASE}/bin
 
 	ebegin "Fixing permissions"
-	chmod 775 "${ED}"/${NMRBASE}/{talos*/bin/,sparta*/bin/,nmrbin.linux9/,com/,dynamo/tcl/,nmrtxt/*.com,talos*/com/,promega/bin/}* || die
+	chmod 775 "${ED}"/${NMRBASE}/{talos*/bin/,sparta*/bin/,nmrbin.linux*/,com/,dynamo/tcl/,nmrtxt/*.com,talos*/com/,promega/bin/}* || die
 	eend
 
-	exeinto ${NMRBASE}/nmrbin.linux9
+	exeinto ${NMRBASE}/nmrbin.$(usex x86 linux9 linux212_64)
 	doexe "${T}"/nmrWish
 
 	insinto ${NMRBASE}/nmrtxt


^ permalink raw reply related	[flat|nested] 22+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-chemistry/nmrpipe/, sci-chemistry/nmrpipe/files/
@ 2021-01-05 20:20 Andrew Ammerlaan
  0 siblings, 0 replies; 22+ messages in thread
From: Andrew Ammerlaan @ 2021-01-05 20:20 UTC (permalink / raw
  To: gentoo-commits

commit:     c5c54229938315a8130e778033004f58a35cc347
Author:     Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
AuthorDate: Tue Jan  5 20:20:45 2021 +0000
Commit:     Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
CommitDate: Tue Jan  5 20:20:45 2021 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=c5c54229

sci-chemistry/nmrpipe: vers bump, fix fetch, fix homepage, add keywords

EAPI bump, update ncurses dep

Package-Manager: Portage-3.0.12, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> riseup.net>

 .../files/nmrpipe-8.7.2015.320.15.26-lib.patch     | 36 ----------------------
 ...20.15.26.ebuild => nmrpipe-8.7.20200827.ebuild} | 35 ++++++++++-----------
 2 files changed, 17 insertions(+), 54 deletions(-)

diff --git a/sci-chemistry/nmrpipe/files/nmrpipe-8.7.2015.320.15.26-lib.patch b/sci-chemistry/nmrpipe/files/nmrpipe-8.7.2015.320.15.26-lib.patch
deleted file mode 100644
index 91abd611d..000000000
--- a/sci-chemistry/nmrpipe/files/nmrpipe-8.7.2015.320.15.26-lib.patch
+++ /dev/null
@@ -1,36 +0,0 @@
---- nmrbin.linux9/nmrDraw	2009-10-07 23:33:21.000000000 +0200
-+++ nmrbin.linux9/nmrDraw.new	2009-10-24 16:29:03.000000000 +0200
-@@ -2,6 +2,17 @@
- 
- setenv EXTRASMENU $NMRTXT/dot.text_extras_menu
- 
-+setenv NMRBIN ${NMRBASE}/bin/
-+setenv NMRLIB ${NMRBIN}/lib
-+setenv AUXLIB ${NMRBIN}/openwin/lib
-+
-+if (!($?LD_LIBRARY_PATH)) then
-+   setenv LD_LIBRARY_PATH ${NMRLIB}:${AUXLIB}
-+else
-+   setenv LD_LIBRARY_PATH ${NMRLIB}:${LD_LIBRARY_PATH}:${AUXLIB}
-+endif
-+
-+
- if ($DISPLAY == "") then
-    echo Warning: DISPLAY environment variable is not set.
-    exit 1
---- nmrbin.linux9/xNotify	2009-10-07 23:33:21.000000000 +0200
-+++ nmrbin.linux9/xNotify.new	2009-10-24 16:29:42.000000000 +0200
-@@ -1,2 +1,13 @@
- #!/bin/csh -f
-+
-+setenv NMRBIN ${NMRBASE}/bin
-+setenv NMRLIB ${NMRBIN}/lib
-+setenv AUXLIB ${NMRBIN}/openwin/lib
-+
-+if (!($?LD_LIBRARY_PATH)) then
-+   setenv LD_LIBRARY_PATH ${NMRLIB}:${AUXLIB}
-+else
-+   setenv LD_LIBRARY_PATH ${NMRLIB}:${LD_LIBRARY_PATH}:${AUXLIB}
-+endif
-+
- xnotify.exe -Wfsdb $*

diff --git a/sci-chemistry/nmrpipe/nmrpipe-8.7.2015.320.15.26.ebuild b/sci-chemistry/nmrpipe/nmrpipe-8.7.20200827.ebuild
similarity index 86%
rename from sci-chemistry/nmrpipe/nmrpipe-8.7.2015.320.15.26.ebuild
rename to sci-chemistry/nmrpipe/nmrpipe-8.7.20200827.ebuild
index d0bc331c2..e56ce8fd9 100644
--- a/sci-chemistry/nmrpipe/nmrpipe-8.7.2015.320.15.26.ebuild
+++ b/sci-chemistry/nmrpipe/nmrpipe-8.7.20200827.ebuild
@@ -1,14 +1,14 @@
-# Copyright 1999-2017 Gentoo Foundation
+# Copyright 1999-2021 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
 # Versioning is output of nmrPipe -help
 
-EAPI=6
+EAPI=7
 
-inherit eutils virtualx
+inherit virtualx
 
 DESCRIPTION="Spectral visualisation, analysis and Fourier processing"
-HOMEPAGE="http://spin.niddk.nih.gov/bax/software/NMRPipe/"
+HOMEPAGE="https://www.ibbr.umd.edu/nmrpipe"
 #SRC_URI="
 #	NMRPipeX.tZ
 #	talos.tZ
@@ -16,12 +16,12 @@ HOMEPAGE="http://spin.niddk.nih.gov/bax/software/NMRPipe/"
 #	binval.com
 #	install.com"
 SRC_URI="
-	http://spin.niddk.nih.gov/NMRPipe/install/download/install.com -> install-${PV}.com
-	http://spin.niddk.nih.gov/NMRPipe/install/download/binval.com -> binval-${PV}.com
-	http://spin.niddk.nih.gov/NMRPipe/install/download/NMRPipeX.tZ -> NMRPipeX-${PV}.tZ
-	http://spin.niddk.nih.gov/NMRPipe/install/download/plugin.smile.tZ -> plugin.smile-${PV}.tZ
-	http://spin.niddk.nih.gov/NMRPipe/install/download/talos.tZ -> talos-${PV}.tZ
-	http://spin.niddk.nih.gov/NMRPipe/install/download/dyn.tZ -> dyn-${PV}.tZ
+	https://www.ibbr.umd.edu/nmrpipe/install.com -> install-${PV}.com
+	https://www.ibbr.umd.edu/nmrpipe/binval.com -> binval-${PV}.com
+	https://www.ibbr.umd.edu/nmrpipe/NMRPipeX.tZ -> NMRPipeX-${PV}.tZ
+	https://www.ibbr.umd.edu/nmrpipe/plugin.smile.tZ -> plugin.smile-${PV}.tZ
+	https://www.ibbr.umd.edu/nmrpipe/talos.tZ -> talos-${PV}.tZ
+	https://www.ibbr.umd.edu/nmrpipe/dyn.tZ -> dyn-${PV}.tZ
 	"
 
 SLOT="0"
@@ -30,10 +30,9 @@ LICENSE="nmrpipe"
 # x86 architecture. The maintainer chose to keep the sources closed, but
 # says he will gladly provide precompiled executables for other platforms
 # if there are such requests.
-KEYWORDS=""
-IUSE=""
+KEYWORDS="~amd64 ~x86"
 
-RESTRICT="strip"
+RESTRICT="strip bindist mirror"
 
 DEPEND="app-shells/tcsh"
 RDEPEND="${DEPEND}
@@ -43,10 +42,10 @@ RDEPEND="${DEPEND}
 	media-fonts/font-sun-misc
 	!sci-chemistry/sparta+
 	!sci-chemistry/talos+
-	sys-libs/ncurses:5/5
+	sys-libs/ncurses-compat:5/5
 	x11-apps/xset
-	|| ( x11-libs/xview x11-libs/xview-bin )
-	!prefix? ( >=x11-libs/libX11-1.6.2[abi_x86_32(-)] )
+	x11-libs/xview-bin
+	!prefix? ( >=x11-libs/libX11-1.6.2 )
 	prefix? ( dev-util/patchelf )"
 
 S="${WORKDIR}/NMR"
@@ -69,7 +68,7 @@ src_unpack() {
 	# ... and make the installation scripts executable.
 	chmod +x *.com || die
 	VIRTUALX_COMMAND="csh"
-	virtualmake \
+	virtx \
 		./install.com \
 		+type $(usex x86 linux9 linux212_64) \
 		+src "${WORKDIR}" \
@@ -78,8 +77,8 @@ src_unpack() {
 }
 
 src_prepare() {
+	default
 	local bin i
-	epatch "${FILESDIR}"/${P}-lib.patch
 
 	mv nmrbin.$(usex x86 linux9 linux212_64)/nmr{W,w}ish || die
 


^ permalink raw reply related	[flat|nested] 22+ messages in thread

end of thread, other threads:[~2021-01-05 20:20 UTC | newest]

Thread overview: 22+ messages (download: mbox.gz follow: Atom feed
-- links below jump to the message on this page --
2013-01-23  9:13 [gentoo-commits] proj/sci:master commit in: sci-chemistry/nmrpipe/, sci-chemistry/nmrpipe/files/ Justin Lecher
  -- strict thread matches above, loose matches on Subject: below --
2021-01-05 20:20 Andrew Ammerlaan
2015-11-26 11:57 Justin Lecher
2013-10-28  9:01 Justin Lecher
2013-08-12 21:27 Sebastien Fabbro
2012-10-28 21:54 Justin Lecher
2012-07-31 10:11 Justin Lecher
2012-05-02 19:22 Justin Lecher
2012-05-02  6:52 Justin Lecher
2012-03-22 21:57 Justin Lecher
2012-01-10  9:30 Justin Lecher
2011-12-06 16:35 Justin Lecher
2011-11-11 11:26 Justin Lecher
2011-08-31 10:05 Justin Lecher
2011-07-06 13:35 Justin Lecher
2011-06-20  5:20 Justin Lecher
2011-05-28  7:49 Justin Lecher
2011-04-29 10:05 Justin Lecher
2011-04-28  7:50 Justin Lecher
2011-04-04 11:18 Justin Lecher
2011-03-11 17:44 Justin Lecher
2011-02-26 12:53 Justin Lecher

This is a public inbox, see mirroring instructions
for how to clone and mirror all data and code used for this inbox