From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) by finch.gentoo.org (Postfix) with ESMTP id 461FF138010 for ; Wed, 24 Oct 2012 06:36:52 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id AF41BE0477; Wed, 24 Oct 2012 06:36:24 +0000 (UTC) Received: from smtp.gentoo.org (smtp.gentoo.org [140.211.166.183]) by pigeon.gentoo.org (Postfix) with ESMTP id 1C2D8E0477 for ; Wed, 24 Oct 2012 06:36:24 +0000 (UTC) Received: from hornbill.gentoo.org (hornbill.gentoo.org [94.100.119.163]) (using TLSv1 with cipher AECDH-AES256-SHA (256/256 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id 47E1133D891 for ; Wed, 24 Oct 2012 06:36:23 +0000 (UTC) Received: from localhost.localdomain (localhost [127.0.0.1]) by hornbill.gentoo.org (Postfix) with ESMTP id D9547E5448 for ; Wed, 24 Oct 2012 06:36:21 +0000 (UTC) From: "Justin Lecher" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Justin Lecher" Message-ID: <1351059155.7bdbabe8d7c83d0536b7b3f4955c3f175456b86c.jlec@gentoo> Subject: [gentoo-commits] proj/sci:master commit in: / X-VCS-Repository: proj/sci X-VCS-Committer: jlec X-VCS-Committer-Name: Justin Lecher X-VCS-Revision: 7bdbabe8d7c83d0536b7b3f4955c3f175456b86c X-VCS-Branch: master Date: Wed, 24 Oct 2012 06:36:21 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Archives-Salt: d4b7c126-fde5-41ec-bee1-1ab213bef428 X-Archives-Hash: 0fa9342e05b7af01bd8cd5ad6394dc39 commit: 7bdbabe8d7c83d0536b7b3f4955c3f175456b86c Author: Justin Lecher gentoo org> AuthorDate: Wed Oct 24 06:12:35 2012 +0000 Commit: Justin Lecher gentoo org> CommitDate: Wed Oct 24 06:12:35 2012 +0000 URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=7bdbabe8 Merge branch 'master' of git+ssh://git.overlays.gentoo.org/proj/sci * 'master' of git+ssh://git.overlays.gentoo.org/proj/sci: version bump vmd: Fix netcdf config, bug #406737 wxmacmolplt: Version bump to 7.4.3 ambertools: Fix parallel tests ambertools: Version bump to 12 avogadro: Version bump to 1.1.0 app-doc/root-docs: version bump sci-physics/root: version bump openbabel-python: Fix typo openbabel-python: Add PYTHON_DEPS inchi: Add static-libs USE flag openbabel-python: Version bump to 2.3.2 openbabel-perl: Version bump to 2.3.2 openbabel: Version bump to 2.3.2 app-doc/root-docs/ChangeLog | 7 + app-doc/root-docs/Manifest | 2 + .../root-docs/files/root-docs-5.32-makehtml.patch | 44 + ...t-docs-9999.ebuild => root-docs-5.32.04.ebuild} | 4 +- ...t-docs-9999.ebuild => root-docs-5.34.02.ebuild} | 2 +- sci-chemistry/ambertools/ChangeLog | 10 + sci-chemistry/ambertools/Manifest | 1 + ...bertools-1.5-r2.ebuild => ambertools-12.ebuild} | 62 +- .../files/ambertools-12-bugfix_14-26.patch |14856 ++++++++++++++++++++ ....5-gentoo2.patch => ambertools-12-gentoo.patch} | 770 +- sci-chemistry/avogadro/ChangeLog | 7 +- sci-chemistry/avogadro/Manifest | 1 + sci-chemistry/avogadro/avogadro-1.1.0.ebuild | 52 + sci-chemistry/openbabel-perl/ChangeLog | 11 + sci-chemistry/openbabel-perl/Manifest | 1 + .../files/openbabel-perl-2.3.2-bindings_only.patch | 108 + .../files/openbabel-perl-2.3.2-trunk_cmake.patch | 41 + sci-chemistry/openbabel-perl/metadata.xml | 12 + .../openbabel-perl/openbabel-perl-2.3.2.ebuild | 66 + sci-chemistry/openbabel-python/ChangeLog | 11 + sci-chemistry/openbabel-python/Manifest | 1 + .../openbabel-python-2.3.2-bindings_only.patch | 209 + .../files/openbabel-python-2.3.2-testpybel.patch | 28 + sci-chemistry/openbabel-python/metadata.xml | 12 + .../openbabel-python/openbabel-python-2.3.2.ebuild | 88 + sci-chemistry/openbabel/ChangeLog | 10 + sci-chemistry/openbabel/Manifest | 1 + .../files/openbabel-2.3.2-test_lib_path.patch | 27 + sci-chemistry/openbabel/metadata.xml | 18 + sci-chemistry/openbabel/openbabel-2.3.2.ebuild | 69 + sci-chemistry/vmd/ChangeLog | 10 + sci-chemistry/vmd/Manifest | 2 + sci-chemistry/vmd/metadata.xml | 15 + sci-chemistry/vmd/vmd-1.9.1.ebuild | 215 + sci-chemistry/wxmacmolplt/ChangeLog | 10 + sci-chemistry/wxmacmolplt/Manifest | 1 + .../wxmacmolplt/files/wxmacmolplt-7.4.3-glew.patch | 12 + sci-chemistry/wxmacmolplt/metadata.xml | 11 + sci-chemistry/wxmacmolplt/wxmacmolplt-7.4.3.ebuild | 44 + sci-libs/inchi/ChangeLog | 10 + sci-libs/inchi/Manifest | 2 + sci-libs/inchi/files/inchi-1.03-shared.patch | 20 + sci-libs/inchi/files/inchi-1.04-static.patch | 25 + sci-libs/inchi/inchi-1.04.ebuild | 81 + .../burrow-owl => sci-libs/inchi}/metadata.xml | 6 +- sci-libs/nfft/ChangeLog | 6 + sci-libs/nfft/Manifest | 3 +- sci-libs/nfft/nfft-3.2.1.ebuild | 36 - .../nfft/{nfft-3.2.0.ebuild => nfft-3.2.2.ebuild} | 2 +- sci-physics/root/ChangeLog | 12 + sci-physics/root/Manifest | 3 + .../root/files/root-5.28.00b-asneeded.patch | 20 + ...le.patch => root-5.28.00b-nobyte-compile.patch} | 47 +- .../files/root-5.28.00h-explicit-functions.patch | 12 + sci-physics/root/files/root-5.32.00-dotfont.patch | 58 + .../files/root-5.32.00-explicit-functions.patch | 18 + sci-physics/root/files/root-5.34.01-glibc216.patch | 35 + sci-physics/root/metadata.xml | 1 + .../root/{root-9999.ebuild => root-5.32.04.ebuild} | 50 +- .../root/{root-9999.ebuild => root-5.34.02.ebuild} | 55 +- 60 files changed, 16931 insertions(+), 422 deletions(-)