[gentoo-commits] proj/auto-numerical-bench:accuracy commit in: accuracy/, numbench/modules/internal/, accuracy/actions/

[gentoo-commits] proj/auto-numerical-bench:accuracy commit in: accuracy/, numbench/modules/internal/, accuracy/actions/

[Andrea Arteaga]

commit:     7fed21ff2a634b11ce17d9b1bd71f318f6f7e28b
Author:     Andrea Arteaga <andyspiros <AT> gmail <DOT> com>
AuthorDate: Mon Sep  3 16:22:28 2012 +0000
Commit:     Andrea Arteaga <andyspiros <AT> gmail <DOT> com>
CommitDate: Mon Sep  3 16:22:28 2012 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/auto-numerical-bench.git;a=commit;h=7fed21ff

Accuracy module: output interpreter and result storage.

---
 accuracy/TestAccuracy.hpp                 |   58 +++++++++++++++++++++-------
 accuracy/actions/ActionGESV.hpp           |    7 +++-
 numbench/modules/internal/accuracyBase.py |   59 +++++++++++++++++++++++++---
 3 files changed, 101 insertions(+), 23 deletions(-)

diff --git a/accuracy/TestAccuracy.hpp b/accuracy/TestAccuracy.hpp
index b0a6cc1..a79b17a 100644
--- a/accuracy/TestAccuracy.hpp
+++ b/accuracy/TestAccuracy.hpp
@@ -5,6 +5,8 @@
 #include <cmath>
 #include <vector>
 #include <iostream>
+#include <fstream>
+#include <cstdio>
 
 #include "utilities/Timer.hpp"
 
@@ -31,28 +33,49 @@ std::vector<int> getLogSizes(
     return sizes;
 }
 
+template<typename value_t> void writeToFile(
+        const std::vector<int>& sizes,
+        const std::vector<value_t>& means,
+        const std::vector<value_t>& stds,
+        const std::string& filename
+    )
+{
+    std::ofstream fs(filename.c_str());
+    fs.precision(10);
+    const int N = sizes.size();
+
+    for(int i = 0; i < N; ++i)
+        fs << sizes[i] << " " << means[i] << " " << stds[i] << "\n";
+
+    fs.close();
+}
+
 
-template<
-    template<class> class Action,
-    typename value_t
->
-std::pair<value_t, value_t> testAccuracy(
+template< template<class> class Action, typename value_t >
+void testAccuracy(
         const int& minsize = 4,
         const int& maxsize = 1000,
-        const unsigned& N = 100u)
+        const unsigned& N = 100u
+    )
 {
-    std::vector<int> sizes = getLogSizes(minsize, maxsize, N);
+    const std::string filename = Action<value_t>::fileName();
+    std::cout << "Beginning operation on file " << filename << std::endl;
+
+    const std::vector<int> sizes = getLogSizes(minsize, maxsize, N);
+    std::vector<value_t> means(N), stds(N);
+
     Timer t;
 
-    for (std::vector<int>::const_iterator i = sizes.begin(), e = sizes.end();
-         i != e; ++i) {
+    for (int i = 0; i < N; ++i) {
 
-        int size = *i;
-        std::cout << " -- Size: " << size << "  -  " << std::flush;
+        int size = sizes[i];
+        std::printf(" -- Size %6i  -  ", size);
+        std::cout << std::flush;
 
-        t.start();
         int N = 0;
         double e, emean = 0., e2mean = 0.;
+
+        t.start();
         do {
             Action<value_t> action(size, N);
             action.compute();
@@ -61,15 +84,20 @@ std::pair<value_t, value_t> testAccuracy(
             e2mean += e*e;
         } while(++N < 100 && t.elapsed() < 1. || N < 4);
 
-        std::cout << N << " samples  -  " << t.elapsed() << " seconds  -  ";
+        std::printf("%3i samples  -  %6f seconds  -  ", N, t.elapsed());
 
         emean /= N;
         e2mean /= N;
         e2mean = std::sqrt(e2mean - emean*emean);
 
-        std::cout << emean << " +/- " << e2mean << std::endl;
-
+        std::printf("%3e +/- %3e", emean, e2mean);
+        std::cout << std::endl;
+        means[i] = emean;
+        stds[i] = e2mean;
     }
+
+    std::cout << "Writing results to file " << filename << "\n" << std::endl;
+    writeToFile(sizes, means, stds, filename);
 }
 
 #endif // TESTACCURACY_HPP

diff --git a/accuracy/actions/ActionGESV.hpp b/accuracy/actions/ActionGESV.hpp
index 454e5f6..cd73164 100644
--- a/accuracy/actions/ActionGESV.hpp
+++ b/accuracy/actions/ActionGESV.hpp
@@ -3,6 +3,7 @@
 
 #include <vector>
 #include <iostream>
+#include <string>
 #include "LinearCongruential.hpp"
 
 extern "C" {
@@ -44,7 +45,11 @@ public:
         return dnrm2_(&size, &b[0], &ONE)/dnrm2_(&size, &bcopy[0], &ONE);
     }
 
-//private:
+    static std::string fileName() {
+        return "accuracy_general_solve.dat";
+    }
+
+private:
     const int size;
     rangen_t rg;
     storage_t A, Acopy, x, b, bcopy;

diff --git a/numbench/modules/internal/accuracyBase.py b/numbench/modules/internal/accuracyBase.py
index 92a4b28..c25e023 100644
--- a/numbench/modules/internal/accuracyBase.py
+++ b/numbench/modules/internal/accuracyBase.py
@@ -1,5 +1,5 @@
 from os.path import dirname, join as pjoin
-import os, subprocess as sp
+import os, re, subprocess as sp
 
 from numbench import benchchildren, benchconfig as cfg
 from numbench.utils import alternatives as alt, benchutils as bu
@@ -24,7 +24,6 @@ def compileExe(test, libname, implementation):
     test['compileenv']['LIBRARY_PATH'] = libenvc
 
     libenvr = libenv + test['runenv'].get('LD_LIBRARY_PATH', '')
-    print "\n\nLIBENV: ", libenvr, "\n\n"
     test['runenv']['LD_LIBRARY_PATH'] = libenvr
 
     # Set compile-time environment
@@ -66,6 +65,7 @@ def compileExe(test, libname, implementation):
 
 def runExe(test, implementation, exe, args):
     logdir = pjoin(test['logdir'], implementation)
+    testdir = pjoin(test['testdir'], implementation)
 
     # Check linking
     logfs = file(pjoin(logdir, 'accuracyLinking.log'), 'w')
@@ -87,7 +87,6 @@ def runExe(test, implementation, exe, args):
 
     # Open pipe
     try:
-        testdir = pjoin(test['testdir'], implementation)
         proc = sp.Popen(args, bufsize=1, stdout=sp.PIPE, stderr=errfs, \
                         env=test['runenv'], cwd=testdir)
         benchchildren.append(proc)
@@ -96,11 +95,9 @@ def runExe(test, implementation, exe, args):
         Print('Command line: ' + ' '.join(args))
         return -1, None
 
-    result = {}
-
     # Interpret output
     Print('Begin execution')
-    # TODO: interpret output, store results,...
+    result = interpretOutput(proc.stdout, logfs, testdir)
     proc.wait()
     Print("Execution finished with return code " + str(proc.returncode))
 
@@ -111,12 +108,60 @@ def runExe(test, implementation, exe, args):
     if errp == 0:
         os.unlink(errfname)
 
-
     # Close, return
     logfs.close()
     return proc.returncode, result
 
 
+def interpretOutput(stdout, logfs, testdir):
+    result = {}
+
+    operationre = 'Beginning operation on file (accuracy_(.*).dat)'
+    while True:
+        operation = None
+        while operation is None:
+            line = stdout.readline()
+            if not line:
+                break
+
+            try:
+                resfile, operation = re.match(operationre, line).groups()
+                logfs.write(line)
+            except:
+                pass
+
+        # Check is program is terminated
+        if operation is None:
+            break
+
+        result[operation] = pjoin(testdir, resfile)
+        Print(operation + " -> " + resfile)
+
+
+        # Many different sizes for each operation test
+        Print.down()
+
+        while True:
+            outline = stdout.readline()
+
+            if not outline:
+                Print.up()
+                Print('Execution error')
+                return None
+
+            logfs.write(outline)
+            logfs.flush()
+
+            if not outline.startswith(' -- Size'):
+                break
+
+            Print(outline[4:].strip())
+
+        Print.up()
+
+    return result
+
+
 def runTest(self, test, implementation):
     exe = compileExe(test, self.libname, implementation)[1]
     runExe(test, implementation, exe, self.tests)