From mboxrd@z Thu Jan 1 00:00:00 1970 Received: from pigeon.gentoo.org ([208.92.234.80] helo=lists.gentoo.org) by finch.gentoo.org with esmtp (Exim 4.60) (envelope-from <gentoo-commits+bounces-466398-garchives=archives.gentoo.org@lists.gentoo.org>) id 1SWv0F-0005WP-2n for garchives@archives.gentoo.org; Tue, 22 May 2012 19:44:19 +0000 Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 19FE7E0700; Tue, 22 May 2012 19:43:17 +0000 (UTC) Received: from smtp.gentoo.org (smtp.gentoo.org [140.211.166.183]) by pigeon.gentoo.org (Postfix) with ESMTP id DF0CFE06FD for <gentoo-commits@lists.gentoo.org>; Tue, 22 May 2012 19:43:16 +0000 (UTC) Received: from hornbill.gentoo.org (hornbill.gentoo.org [94.100.119.163]) (using TLSv1 with cipher AECDH-AES256-SHA (256/256 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id 559CB1B401A for <gentoo-commits@lists.gentoo.org>; Tue, 22 May 2012 19:43:16 +0000 (UTC) Received: from localhost.localdomain (localhost [127.0.0.1]) by hornbill.gentoo.org (Postfix) with ESMTP id 18165E5434 for <gentoo-commits@lists.gentoo.org>; Tue, 22 May 2012 19:43:14 +0000 (UTC) From: "Justin Lecher" <jlec@gentoo.org> To: gentoo-commits@lists.gentoo.org Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Justin Lecher" <jlec@gentoo.org> Message-ID: <1337712421.fe9af8f2b9e1099e6b84ba7009fe7fdfaf6c110d.jlec@gentoo> Subject: [gentoo-commits] proj/sci:master commit in: dev-perl/Bio-BigFile/ X-VCS-Repository: proj/sci X-VCS-Files: dev-perl/Bio-BigFile/Bio-BigFile-1.06.ebuild dev-perl/Bio-BigFile/ChangeLog X-VCS-Directories: dev-perl/Bio-BigFile/ X-VCS-Committer: jlec X-VCS-Committer-Name: Justin Lecher X-VCS-Revision: fe9af8f2b9e1099e6b84ba7009fe7fdfaf6c110d X-VCS-Branch: master Date: Tue, 22 May 2012 19:43:14 +0000 (UTC) Precedence: bulk List-Post: <mailto:gentoo-commits@lists.gentoo.org> List-Help: <mailto:gentoo-commits+help@lists.gentoo.org> List-Unsubscribe: <mailto:gentoo-commits+unsubscribe@lists.gentoo.org> List-Subscribe: <mailto:gentoo-commits+subscribe@lists.gentoo.org> List-Id: Gentoo Linux mail <gentoo-commits.gentoo.org> X-BeenThere: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: quoted-printable X-Archives-Salt: 15765d87-a702-43f4-9006-bdcb9c3fb37d X-Archives-Hash: 53f3f12a704dfb9bbb74cc725bbab58a commit: fe9af8f2b9e1099e6b84ba7009fe7fdfaf6c110d Author: Justin Lecher <jlec <AT> gentoo <DOT> org> AuthorDate: Tue May 22 18:47:01 2012 +0000 Commit: Justin Lecher <jlec <AT> gentoo <DOT> org> CommitDate: Tue May 22 18:47:01 2012 +0000 URL: http://git.overlays.gentoo.org/gitweb/?p=3Dproj/sci.git;a=3Dc= ommit;h=3Dfe9af8f2 dev-perl/Bio-BigFile: Add missing eutils.eclass, bump to EAPI=3D4, remove= unnecessary bits (Portage version: 2.2.0_alpha107/git/Linux x86_64, unsigned Manifest comm= it) --- dev-perl/Bio-BigFile/Bio-BigFile-1.06.ebuild | 11 ++++++----- dev-perl/Bio-BigFile/ChangeLog | 3 +++ 2 files changed, 9 insertions(+), 5 deletions(-) diff --git a/dev-perl/Bio-BigFile/Bio-BigFile-1.06.ebuild b/dev-perl/Bio-= BigFile/Bio-BigFile-1.06.ebuild index f23ca23..7da6616 100644 --- a/dev-perl/Bio-BigFile/Bio-BigFile-1.06.ebuild +++ b/dev-perl/Bio-BigFile/Bio-BigFile-1.06.ebuild @@ -2,10 +2,11 @@ # Distributed under the terms of the GNU General Public License v2 # $Header: $ =20 -EAPI=3D3 +EAPI=3D4 =20 MODULE_AUTHOR=3D"LDS" -inherit perl-module + +inherit eutils flag-o-matic perl-module =20 DESCRIPTION=3D"BigWig and BigBed file perl-based interface for Gbrowse-2= " =20 @@ -21,7 +22,7 @@ DEPEND=3D"${RDEPEND} SRC_TEST=3D"do" =20 src_prepare(){ - epatch "${FILESDIR}"/Build.PL.patch || die "Failed to patch Build.PL" + append-cflags -D_REENTRANT -D_GNU_SOURCE -fno-strict-aliasing + append-lfs-flags + epatch "${FILESDIR}"/Build.PL.patch } - -CFLAGS=3D"${CFLAGS} -D_REENTRANT -D_GNU_SOURCE -fno-strict-aliasing -pip= e -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=3D64" diff --git a/dev-perl/Bio-BigFile/ChangeLog b/dev-perl/Bio-BigFile/Change= Log index 7541c3f..d899200 100644 --- a/dev-perl/Bio-BigFile/ChangeLog +++ b/dev-perl/Bio-BigFile/ChangeLog @@ -2,6 +2,9 @@ # Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2 # $Header: $ =20 + 22 May 2012; Justin Lecher <jlec@gentoo.org> Bio-BigFile-1.06.ebuild: + Add missing eutils.eclass, bump to EAPI=3D4, remove unnecessary bits + 09 Feb 2012; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz> Bio-BigFile-1.06.ebuild: initial ebuild, see bug #402835