[gentoo-commits] proj/sci:master commit in: sci-biology/blasr/

["Andrey Kislyuk" <weaver@gentoo.org>]

commit:     773f59b25f75fd5e9b2492e3bd5c318c520d4866
Author:     Andrey Kislyuk <kislyuk <AT> gmail <DOT> com>
AuthorDate: Thu Mar 22 20:43:46 2012 +0000
Commit:     Andrey Kislyuk <weaver <AT> gentoo <DOT> org>
CommitDate: Thu Mar 22 20:43:46 2012 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=773f59b2

New package, ebuild written by me

---
 sci-biology/blasr/ChangeLog         |   10 ++++++++++
 sci-biology/blasr/blasr-9999.ebuild |   33 +++++++++++++++++++++++++++++++++
 sci-biology/blasr/metadata.xml      |    9 +++++++++
 3 files changed, 52 insertions(+), 0 deletions(-)

diff --git a/sci-biology/blasr/ChangeLog b/sci-biology/blasr/ChangeLog
new file mode 100644
index 0000000..f10ba22
--- /dev/null
+++ b/sci-biology/blasr/ChangeLog
@@ -0,0 +1,10 @@
+# ChangeLog for sci-biology/blasr
+# Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
+# $Header: $
+
+*blasr-9999 (22 Mar 2012)
+
+  22 Mar 2012; Andrey Kislyuk <weaver@gentoo.org> +blasr-9999.ebuild,
+  +metadata.xml:
+  New package, ebuild written by me
+

diff --git a/sci-biology/blasr/blasr-9999.ebuild b/sci-biology/blasr/blasr-9999.ebuild
new file mode 100644
index 0000000..94e874f
--- /dev/null
+++ b/sci-biology/blasr/blasr-9999.ebuild
@@ -0,0 +1,33 @@
+# Copyright 1999-2012 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/gatk/gatk-9999.ebuild,v 1.1 2011/10/31 21:18:17 weaver Exp $
+
+EAPI=4
+
+MY_HASH=885c33a
+
+EGIT_REPO_URI="https://github.com/PacificBiosciences/blasr.git"
+
+inherit git
+
+DESCRIPTION="The PacBio long read aligner"
+HOMEPAGE="http://www.smrtcommunity.com/SMRT-Analysis/Algorithms/BLASR"
+#SRC_URI="https://github.com/PacificBiosciences/blasr/tarball/${PV} -> ${P}.tar.gz"
+SRC_URI=""
+
+LICENSE="as-is"
+SLOT="0"
+IUSE=""
+KEYWORDS=""
+
+DEPEND="sci-libs/hdf5[cxx]"
+RDEPEND=""
+
+S="${WORKDIR}/blasr-${MY_HASH}"
+
+ASSEMBLY_HOME="${D}/usr"
+
+src_install() {
+	dodir /usr/bin
+	make install ASSEMBLY_HOME="${D}/usr" || die
+}

diff --git a/sci-biology/blasr/metadata.xml b/sci-biology/blasr/metadata.xml
new file mode 100644
index 0000000..3302123
--- /dev/null
+++ b/sci-biology/blasr/metadata.xml
@@ -0,0 +1,9 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+	<maintainer>
+		<email>weaver@gentoo.org</email>
+		<name>Andrey Kislyuk</name>
+	</maintainer>
+	<herd>sci-biology</herd>
+</pkgmetadata>