From: "Andreas Sturmlechner" <asturm@gentoo.org>
To: gentoo-commits@lists.gentoo.org
Subject: [gentoo-commits] repo/gentoo:master commit in: sci-biology/emboss/
Date: Fri, 12 Mar 2021 15:31:55 +0000 (UTC) [thread overview]
Message-ID: <1615563075.c4919007b325c1ab3852e60f64926ff98984d16f.asturm@gentoo> (raw)
commit: c4919007b325c1ab3852e60f64926ff98984d16f
Author: Andreas Sturmlechner <asturm <AT> gentoo <DOT> org>
AuthorDate: Fri Mar 12 10:06:50 2021 +0000
Commit: Andreas Sturmlechner <asturm <AT> gentoo <DOT> org>
CommitDate: Fri Mar 12 15:31:15 2021 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=c4919007
sci-biology/emboss: EAPI-7 bump, minor style
Bug: https://bugs.gentoo.org/770262
Package-Manager: Portage-3.0.17, Repoman-3.0.2
Signed-off-by: Andreas Sturmlechner <asturm <AT> gentoo.org>
sci-biology/emboss/emboss-6.6.0-r1.ebuild | 17 ++++++++---------
1 file changed, 8 insertions(+), 9 deletions(-)
diff --git a/sci-biology/emboss/emboss-6.6.0-r1.ebuild b/sci-biology/emboss/emboss-6.6.0-r1.ebuild
index 2aa5aa9bc5c..1c74ded5e22 100644
--- a/sci-biology/emboss/emboss-6.6.0-r1.ebuild
+++ b/sci-biology/emboss/emboss-6.6.0-r1.ebuild
@@ -1,7 +1,7 @@
-# Copyright 1999-2017 Gentoo Foundation
+# Copyright 1999-2021 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
-EAPI=6
+EAPI=7
EBO_EAUTORECONF=1
@@ -9,10 +9,11 @@ inherit emboss-r2 readme.gentoo-r1
DESCRIPTION="The European Molecular Biology Open Software Suite - A sequence analysis package"
SRC_URI="ftp://emboss.open-bio.org/pub/${PN^^}/${P^^}.tar.gz"
+S="${WORKDIR}/${P^^}"
+LICENSE+=" Apache-2.0 GPL-3+ CC-BY-3.0"
KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
IUSE="minimal"
-LICENSE+=" Apache-2.0 GPL-3+ CC-BY-3.0"
RDEPEND="
!games-action/xbomber
@@ -27,8 +28,6 @@ PDEPEND="
sci-biology/rebase
)"
-S="${WORKDIR}/${P^^}"
-
PATCHES=(
"${FILESDIR}"/${P}_fix-build-system.patch
"${FILESDIR}"/${P}_FORTIFY_SOURCE-fix.patch
@@ -42,20 +41,20 @@ src_install() {
readme.gentoo_create_doc
# Install env file for setting libplplot and acd files path.
- cat > 22emboss <<- EOF || die
+ newenvd - 22emboss <<- EOF || die
# ACD files location
EMBOSS_ACDROOT="${EPREFIX}/usr/share/EMBOSS/acd"
EMBOSS_DATA="${EPREFIX}/usr/share/EMBOSS/data"
EOF
- doenvd 22emboss
# Remove useless dummy files
- find "${ED%/}"/usr/share/EMBOSS -name dummyfile -delete || die "Failed to remove dummy files"
+ find "${ED}"/usr/share/EMBOSS -name dummyfile -delete \
+ || die "Failed to remove dummy files"
# Move the provided codon files to a different directory. This will avoid
# user confusion and file collisions on case-insensitive file systems (see
# bug #115446). This change is documented in "README.gentoo".
- mv "${ED%/}"/usr/share/EMBOSS/data/CODONS{,.orig} \
+ mv "${ED}"/usr/share/EMBOSS/data/CODONS{,.orig} \
|| die "Failed to move CODON directory"
}
next reply other threads:[~2021-03-12 15:31 UTC|newest]
Thread overview: 10+ messages / expand[flat|nested] mbox.gz Atom feed top
2021-03-12 15:31 Andreas Sturmlechner [this message]
-- strict thread matches above, loose matches on Subject: below --
2024-03-30 19:36 [gentoo-commits] repo/gentoo:master commit in: sci-biology/emboss/ David Seifert
2022-02-13 23:28 David Seifert
2017-02-06 21:27 David Seifert
2016-07-28 21:36 Austin English
2015-08-27 13:47 Justin Lecher
2015-08-26 17:22 Manuel Rüger
2015-08-26 14:26 Mikle Kolyada
2015-08-26 14:25 Mikle Kolyada
2015-08-16 23:03 Mikle Kolyada
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